Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e17f
(585 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-12|CAJ30227.1| 558|Caenorhabditis elegans Hypothetical p... 146 1e-35
Z81068-4|CAE54896.1| 531|Caenorhabditis elegans Hypothetical pr... 146 1e-35
Z81068-3|CAB02983.1| 600|Caenorhabditis elegans Hypothetical pr... 146 1e-35
Z81068-2|CAB02984.1| 562|Caenorhabditis elegans Hypothetical pr... 146 1e-35
Z69385-1|CAA93424.2| 515|Caenorhabditis elegans Hypothetical pr... 126 2e-29
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 32 0.34
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 32 0.34
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z78019-7|CAB01454.2| 547|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF025466-5|AAB71031.2| 428|Caenorhabditis elegans Nematode asta... 28 5.6
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 27 9.8
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 27 9.8
U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical p... 27 9.8
>Z81068-12|CAJ30227.1| 558|Caenorhabditis elegans Hypothetical
protein F25H5.3d protein.
Length = 558
Score = 146 bits (353), Expect = 1e-35
Identities = 70/124 (56%), Positives = 90/124 (72%)
Frame = +1
Query: 214 SQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYH 393
+ ++H+C LDI +R +GIICTIGPA +V +L+K++ GMN+AR+NFSHGSHEYH
Sbjct: 56 THMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNGMNIARLNFSHGSHEYH 115
Query: 394 AETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTT 573
A TI N REA S+S K + IALDTKGPEIRTGLL GG SAE+EL +G +I+LTT
Sbjct: 116 AGTIANVREAADSFSDKR----VIGIALDTKGPEIRTGLLAGGASAEIELARGASIRLTT 171
Query: 574 SSDY 585
+
Sbjct: 172 DPHF 175
>Z81068-4|CAE54896.1| 531|Caenorhabditis elegans Hypothetical
protein F25H5.3c protein.
Length = 531
Score = 146 bits (353), Expect = 1e-35
Identities = 70/124 (56%), Positives = 90/124 (72%)
Frame = +1
Query: 214 SQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYH 393
+ ++H+C LDI +R +GIICTIGPA +V +L+K++ GMN+AR+NFSHGSHEYH
Sbjct: 29 THMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNGMNIARLNFSHGSHEYH 88
Query: 394 AETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTT 573
A TI N REA S+S K + IALDTKGPEIRTGLL GG SAE+EL +G +I+LTT
Sbjct: 89 AGTIANVREAADSFSDKR----VIGIALDTKGPEIRTGLLAGGASAEIELARGASIRLTT 144
Query: 574 SSDY 585
+
Sbjct: 145 DPHF 148
>Z81068-3|CAB02983.1| 600|Caenorhabditis elegans Hypothetical
protein F25H5.3b protein.
Length = 600
Score = 146 bits (353), Expect = 1e-35
Identities = 70/124 (56%), Positives = 90/124 (72%)
Frame = +1
Query: 214 SQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYH 393
+ ++H+C LDI +R +GIICTIGPA +V +L+K++ GMN+AR+NFSHGSHEYH
Sbjct: 98 THMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNGMNIARLNFSHGSHEYH 157
Query: 394 AETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTT 573
A TI N REA S+S K + IALDTKGPEIRTGLL GG SAE+EL +G +I+LTT
Sbjct: 158 AGTIANVREAADSFSDKR----VIGIALDTKGPEIRTGLLAGGASAEIELARGASIRLTT 213
Query: 574 SSDY 585
+
Sbjct: 214 DPHF 217
>Z81068-2|CAB02984.1| 562|Caenorhabditis elegans Hypothetical
protein F25H5.3a protein.
Length = 562
Score = 146 bits (353), Expect = 1e-35
Identities = 70/124 (56%), Positives = 90/124 (72%)
Frame = +1
Query: 214 SQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYH 393
+ ++H+C LDI +R +GIICTIGPA +V +L+K++ GMN+AR+NFSHGSHEYH
Sbjct: 60 THMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNGMNIARLNFSHGSHEYH 119
Query: 394 AETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTT 573
A TI N REA S+S K + IALDTKGPEIRTGLL GG SAE+EL +G +I+LTT
Sbjct: 120 AGTIANVREAADSFSDKR----VIGIALDTKGPEIRTGLLAGGASAEIELARGASIRLTT 175
Query: 574 SSDY 585
+
Sbjct: 176 DPHF 179
>Z69385-1|CAA93424.2| 515|Caenorhabditis elegans Hypothetical
protein ZK593.1 protein.
Length = 515
Score = 126 bits (303), Expect = 2e-29
Identities = 59/120 (49%), Positives = 84/120 (70%)
Frame = +1
Query: 214 SQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYH 393
+ + H+CGL I + R +G+ICTIGPA +V L KM+ TGMN+AR+NFSHG+HE H
Sbjct: 16 TNISHLCGLRISERPQKTRKTGVICTIGPACSDVETLRKMINTGMNIARLNFSHGTHEAH 75
Query: 394 AETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTT 573
A TI+ REA ++ +PF +AIALDTKGPEIRTG+ EV+L+ G++++++T
Sbjct: 76 AATIKTIREAAEN------APFPVAIALDTKGPEIRTGMF-ANNMKEVQLENGKSVRVST 128
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 31.9 bits (69), Expect = 0.34
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -2
Query: 485 LVSNAMAKEKGEPSLAL*LFSASRQLRM-VSAWYSWEPCEKFILATFIPVSIIFS 324
L SNA KEKG SL + F+ +R A W P E FIL T I ++ S
Sbjct: 74 LSSNAPVKEKGPSSLFI--FAEDNIIRRNAKAIIEWGPFEYFILLTIIGNCVVLS 126
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 31.9 bits (69), Expect = 0.34
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -2
Query: 485 LVSNAMAKEKGEPSLAL*LFSASRQLRM-VSAWYSWEPCEKFILATFIPVSIIFS 324
L SNA KEKG SL + F+ +R A W P E FIL T I ++ S
Sbjct: 74 LSSNAPVKEKGPSSLFI--FAEDNIIRRNAKAIIEWGPFEYFILLTIIGNCVVLS 126
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -1
Query: 408 ANGLCV--VLMGTVREVHPCHVHSRXXXXXXHSYITGCRSNSTDYSGETDVRRLGV-NVE 238
AN LC+ V+ G+ +E H + + R +GC N+ ++ D +RL V N++
Sbjct: 1784 ANPLCIQPVVKGSCQEAHLRYYYDRVTDSCRLFEYSGCDGNANNFGSLEDCQRLCVLNIQ 1843
Query: 237 T 235
+
Sbjct: 1844 S 1844
>Z78019-7|CAB01454.2| 547|Caenorhabditis elegans Hypothetical
protein ZK863.3 protein.
Length = 547
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -1
Query: 282 YSGETDVRRLGVNVETAHMLELGADVGDCGLFNCTRLDFAI 160
YS + ++ +G+ +ET L + D L+ CTRL+ +
Sbjct: 203 YSERSKMKCIGITIETRPDYCLPRHLNDMLLYGCTRLEIGV 243
>AF025466-5|AAB71031.2| 428|Caenorhabditis elegans Nematode astacin
protease protein27 protein.
Length = 428
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 316 AVLEKMMETGMNVARMNFSHGSHEYHAETIRNCRE 420
A+ +M T +V+RMN + HE A T+ C++
Sbjct: 233 AMGNRMRATFQDVSRMNVLYNCHERCANTLNRCQQ 267
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = -2
Query: 392 WYSWEPCEKFILATFIPVSIIFSSTATLRDAGPIVQIIPERRMYEDLESMSR 237
+Y W P I A F + +IF S + + I++++ + E ES R
Sbjct: 97 YYQWAPFIMAIEAAFFYLPVIFWSMLSTKSGINIIKLVETAQKAEGAESEER 148
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = -2
Query: 392 WYSWEPCEKFILATFIPVSIIFSSTATLRDAGPIVQIIPERRMYEDLESMSR 237
+Y W P I A F + +IF S + + I++++ + E ES R
Sbjct: 97 YYQWAPFIMAIEAAFFYLPVIFWSMLSTKSGINIIKLVETAQKAEGAESEER 148
>U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical
protein T08A9.1 protein.
Length = 1330
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 318 SYITGCRSNSTDYSGETDVRRLGVNVETA 232
+Y+ C S + + E+ +RRLG+N + A
Sbjct: 1246 AYVIFCSSPNRYFVKESSIRRLGINTQNA 1274
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.131 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,916,725
Number of Sequences: 27780
Number of extensions: 261856
Number of successful extensions: 620
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
- SilkBase 1999-2023 -