Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e17f
(585 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g08570.1 68418.m01020 pyruvate kinase, putative similar to py... 109 1e-24
At5g63680.1 68418.m07994 pyruvate kinase, putative similar to py... 109 1e-24
At5g56350.1 68418.m07033 pyruvate kinase, putative similar to py... 106 9e-24
At4g26390.1 68417.m03797 pyruvate kinase, putative identical to ... 103 9e-23
At3g04050.1 68416.m00427 pyruvate kinase, putative similar to py... 101 3e-22
At3g55650.1 68416.m06183 pyruvate kinase, putative simlar to pyr... 98 3e-21
At3g25960.1 68416.m03235 pyruvate kinase, putative similar to py... 97 1e-20
At1g32440.1 68414.m04004 pyruvate kinase, putative similar to py... 80 9e-16
At5g52920.1 68418.m06567 pyruvate kinase, putative similar to py... 75 4e-14
At3g22960.1 68416.m02895 pyruvate kinase, putative similar to py... 68 5e-12
At3g52990.1 68416.m05841 pyruvate kinase, putative similar to py... 64 9e-11
At2g36580.1 68415.m04486 pyruvate kinase, putative similar to py... 63 2e-10
At3g55810.1 68416.m06201 pyruvate kinase, putative similar to py... 48 6e-06
At3g49160.1 68416.m05373 pyruvate kinase family protein similar ... 37 0.009
At4g19440.1 68417.m02860 pentatricopeptide (PPR) repeat-containi... 32 0.24
At5g17170.1 68418.m02012 rubredoxin family protein contains Pfam... 31 0.57
At2g16770.1 68415.m01923 expressed protein 30 0.99
At1g49190.1 68414.m05515 two-component responsive regulator fami... 30 1.3
At5g67190.1 68418.m08470 AP2 domain-containing transcription fac... 29 2.3
At5g51920.1 68418.m06441 expressed protein ; expression supporte... 29 2.3
At5g44820.1 68418.m05493 expressed protein similar to unknown pr... 28 5.3
At4g36900.1 68417.m05231 AP2 domain-containing protein RAP2.10 (... 28 5.3
At5g23020.1 68418.m02691 2-isopropylmalate synthase 2 (IMS2) ide... 27 7.0
At2g31270.1 68415.m03818 hydroxyproline-rich glycoprotein family... 27 9.2
>At5g08570.1 68418.m01020 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Glycine max]
SWISS-PROT:Q42806
Length = 510
Score = 109 bits (263), Expect = 1e-24
Identities = 54/101 (53%), Positives = 71/101 (70%)
Frame = +1
Query: 280 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 459
I+CT+GPASR V+++EK+++ GMNVAR NFSHGSHEYH ET+ N R SA +
Sbjct: 24 IVCTLGPASRTVSMIEKLLKAGMNVARFNFSHGSHEYHQETLDNLR------SAMHNTGI 77
Query: 460 SLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSD 582
A+ LDTKGPEIRTG L+ G ++LK+G+ I +TT D
Sbjct: 78 LAAVMLDTKGPEIRTGFLKDGN--PIQLKEGQEITITTDYD 116
>At5g63680.1 68418.m07994 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Glycine max]
SWISS-PROT:Q42806
Length = 510
Score = 109 bits (262), Expect = 1e-24
Identities = 53/101 (52%), Positives = 72/101 (71%)
Frame = +1
Query: 280 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 459
I+CT+GPASR+V ++EK+++ GMNVAR NFSHGSHEYH ET+ N R A ++ +
Sbjct: 24 IVCTLGPASRSVTMIEKLLKAGMNVARFNFSHGSHEYHQETLDNLRTAMQN------TGI 77
Query: 460 SLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSD 582
A+ LDTKGPEIRTG L+ G ++LK+G+ I +TT D
Sbjct: 78 LAAVMLDTKGPEIRTGFLKDGN--PIQLKEGQEITITTDYD 116
>At5g56350.1 68418.m07033 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Nicotiana tabacum]
SWISS-PROT:Q42954
Length = 498
Score = 106 bits (255), Expect = 9e-24
Identities = 52/101 (51%), Positives = 70/101 (69%)
Frame = +1
Query: 280 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 459
I+CT+GPASR+V ++EK++ GMNVAR NFSHGSHEYH ET+ N + A L +
Sbjct: 12 IVCTLGPASRSVPMVEKLLRAGMNVARFNFSHGSHEYHQETLDNL------HQAMLNTGI 65
Query: 460 SLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSD 582
A+ LDTKGPEIRTG L+ G ++LK+G+ I ++T D
Sbjct: 66 LCAVMLDTKGPEIRTGFLKDG--KPIQLKQGQEITISTDYD 104
>At4g26390.1 68417.m03797 pyruvate kinase, putative identical to
probable pyruvate kinase, cytosolic isozyme (EC
2.7.1.40) [Arabidopsis thaliana] SWISS-PROT:O65595
Length = 497
Score = 103 bits (247), Expect = 9e-23
Identities = 51/101 (50%), Positives = 71/101 (70%)
Frame = +1
Query: 280 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 459
I+CT+GPASR+V ++EK++ GM+VAR NFSHGS+EYH ET+ N R+ A L +
Sbjct: 11 IVCTLGPASRSVPMVEKLLMAGMSVARFNFSHGSYEYHQETLDNLRQ------AMLNTGM 64
Query: 460 SLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSD 582
A+ LDTKGPEIRTG L+ G ++LK+G+ I ++T D
Sbjct: 65 LCAVMLDTKGPEIRTGFLKDG--KPIQLKQGQEITISTDYD 103
>At3g04050.1 68416.m00427 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Nicotiana tabacum]
SWISS-PROT:Q42954
Length = 510
Score = 101 bits (243), Expect = 3e-22
Identities = 53/102 (51%), Positives = 72/102 (70%)
Frame = +1
Query: 280 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 459
I+CT+GPASR+V ++EK+++ GMNVAR NFSHGSH YH ET+ N R A ++ +
Sbjct: 20 IVCTLGPASRSVEMVEKLLKAGMNVARFNFSHGSHSYHQETLDNLRTAMEN------TCI 73
Query: 460 SLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDY 585
A+ LDTKGPEIRTG L+ G VEL +G+ ++T S+DY
Sbjct: 74 PCAVMLDTKGPEIRTGFLKEG--KPVELIQGQ--EITISTDY 111
>At3g55650.1 68416.m06183 pyruvate kinase, putative simlar to
pyruvate kinase, cytosolic isozyme [Nicotiana tabacum]
SWISS-PROT:Q42954
Length = 510
Score = 98.3 bits (234), Expect = 3e-21
Identities = 51/102 (50%), Positives = 69/102 (67%)
Frame = +1
Query: 280 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 459
IICT+GP SR+V ++EK+++ GMNVAR NFSHGSH YH ET+ N R A + +
Sbjct: 20 IICTLGPVSRSVEMIEKLLKAGMNVARFNFSHGSHSYHQETLDNLRTAMDN------TGI 73
Query: 460 SLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDY 585
A+ LDTKGPEIRTG L+ G ++L +G+ ++T S DY
Sbjct: 74 LSAVMLDTKGPEIRTGFLKEG--KPIQLNQGQ--EITISIDY 111
>At3g25960.1 68416.m03235 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Nicotiana tabacum]
SWISS-PROT:Q42954
Length = 497
Score = 96.7 bits (230), Expect = 1e-20
Identities = 50/102 (49%), Positives = 69/102 (67%)
Frame = +1
Query: 280 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 459
I+CT+GPASR+V ++EK+++ GMNVAR NFSHGSH YH ET+ N R A + +
Sbjct: 20 IVCTLGPASRSVEMIEKLLKAGMNVARFNFSHGSHSYHQETLDNLRTAMDN------TGI 73
Query: 460 SLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDY 585
A+ LDTK P IRTG L+ G ++LK+G+ ++T S DY
Sbjct: 74 LCAVMLDTKSPVIRTGFLKEG--KPIQLKQGQ--EITISIDY 111
>At1g32440.1 68414.m04004 pyruvate kinase, putative similar to
pyruvate kinase isozyme G, chloroplast precursor
[Nicotiana tabacum] SWISS-PROT:Q40546
Length = 571
Score = 80.2 bits (189), Expect = 9e-16
Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Frame = +1
Query: 268 RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 447
R + I+CTIGP+S + ++ K+ E GMNVAR+N SHG H H TI +E + K
Sbjct: 99 RKTKIVCTIGPSSSSREMIWKLAEAGMNVARLNMSHGDHASHQITIDLVKEYNSLFVDK- 157
Query: 448 GSPFSLAIALDTKGPEIRTG------LLEGGGSAEVELKKGETIKLTTSSDY 585
++AI LDTKGPE+R+G LE G +K+G ++K T S +Y
Sbjct: 158 ----AIAIMLDTKGPEVRSGDVPQPIFLEEGQEFNFTIKRGVSLKDTVSVNY 205
>At5g52920.1 68418.m06567 pyruvate kinase, putative similar to
pyruvate kinase isozyme G, chloroplast precursor
[Nicotiana tabacum] SWISS-PROT:Q40546
Length = 579
Score = 74.9 bits (176), Expect = 4e-14
Identities = 38/86 (44%), Positives = 55/86 (63%)
Frame = +1
Query: 250 SKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEK 429
SK + R + I+CT+GP++ ++ K+ E GMNVARMN SHG H H + I + K
Sbjct: 104 SKPTVRRKTKIVCTVGPSTNTREMIWKLAEAGMNVARMNMSHGDHASHKKVI----DLVK 159
Query: 430 SYSAKLGSPFSLAIALDTKGPEIRTG 507
Y+A+ ++AI LDTKGPE+R+G
Sbjct: 160 EYNAQT-KDNTIAIMLDTKGPEVRSG 184
>At3g22960.1 68416.m02895 pyruvate kinase, putative similar to
pyruvate kinase isozyme A, chloroplast precursor
[Ricinus communis] SWISS-PROT:Q43117
Length = 596
Score = 67.7 bits (158), Expect = 5e-12
Identities = 37/91 (40%), Positives = 52/91 (57%)
Frame = +1
Query: 268 RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 447
R + +ICTIGPA+ LE + GMNVAR+N HG+ ++H IR+ R +
Sbjct: 117 RRTKLICTIGPATCGFEQLEALAVGGMNVARLNMCHGTRDWHRGVIRSVRRLNEE----- 171
Query: 448 GSPFSLAIALDTKGPEIRTGLLEGGGSAEVE 540
F++AI +DT+G EI G L G SA+ E
Sbjct: 172 -KGFAVAIMMDTEGSEIHMGDLGGEASAKAE 201
>At3g52990.1 68416.m05841 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Glycine max]
SWISS-PROT:Q42806
Length = 527
Score = 63.7 bits (148), Expect = 9e-11
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Frame = +1
Query: 250 SKSSYI-RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAE 426
SKSS+ L+ I+ T+GP SR+V L ++ GM+VAR +FS G +YH ET+ N + A
Sbjct: 21 SKSSFFPALTKIVGTLGPKSRSVEALSGCLKAGMSVARFDFSWGDADYHQETLDNLKVAV 80
Query: 427 KSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSD 582
+S + KL A+ LDT GPE++ + + LK + LT + D
Sbjct: 81 RS-TKKL-----CAVMLDTVGPELQ---VINKSEKAITLKADGLVTLTPNQD 123
>At2g36580.1 68415.m04486 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Glycine max]
SWISS-PROT:Q42806
Length = 527
Score = 62.9 bits (146), Expect = 2e-10
Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Frame = +1
Query: 250 SKSSYI-RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAE 426
SKSS+ L+ I+ T+GP SR+V V+ ++ GM+VAR +FS +YH ET+ N + A
Sbjct: 21 SKSSFFPALTKIVGTLGPKSRSVEVIAGCLKAGMSVARFDFSWCDADYHQETLENLKIAV 80
Query: 427 KSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSD 582
KS + KL A+ LDT GPE++ + + LK + LT S D
Sbjct: 81 KS-TKKL-----CAVMLDTVGPELQ---VINKTEKAISLKADGLVTLTPSQD 123
>At3g55810.1 68416.m06201 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Nicotiana tabacum]
SWISS-PROT:Q42954
Length = 492
Score = 47.6 bits (108), Expect = 6e-06
Identities = 36/102 (35%), Positives = 55/102 (53%)
Frame = +1
Query: 280 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 459
I+CT+GP SR+V ++EK+++ AET+ N R A + +
Sbjct: 20 IVCTLGPVSRSVEMIEKLLK------------------AETLDNLRTAMNN------TGI 55
Query: 460 SLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDY 585
A+ LDTKGPEIRTG L+ G ++L +G+ ++T S DY
Sbjct: 56 LCAVMLDTKGPEIRTGFLKEG--KPIQLNQGQ--EITISIDY 93
>At3g49160.1 68416.m05373 pyruvate kinase family protein similar to
SP|Q92122 Pyruvate kinase, muscle isozyme (EC 2.7.1.40)
(Cytosolic thyroid hormone binding protein) (CTHBP)
{Xenopus laevis}; contains Pfam profile PF00224:
Pyruvate kinase, barrel domain
Length = 710
Score = 37.1 bits (82), Expect = 0.009
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +1
Query: 268 RLSGIICTIGP-ASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAK 444
R + I+ TIG A+ + + +++ G +V R+N +HG E I+ R S
Sbjct: 234 RSTHIMVTIGEEATLSETFITDILKAGTSVIRINCAHGDPSIWGEIIKRVRRT----SQM 289
Query: 445 LGSPFSLAIALDTKGPEIRTGLLEGG 522
L P + +D GP++RTG L+ G
Sbjct: 290 LEMP--CRVHMDLAGPKLRTGTLKPG 313
>At4g19440.1 68417.m02860 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 825
Score = 32.3 bits (70), Expect = 0.24
Identities = 28/92 (30%), Positives = 44/92 (47%)
Frame = +1
Query: 97 RELTDKYLHYNPLKMVYPTIHDGEIEAGAVEKPTVANVGSQLQHMCGLDIDSKSSYIRLS 276
+E+T K + P +VY + D IEAG++ K L GL + S S+Y L
Sbjct: 354 KEMTKK--GFPPNVIVYNNLIDSFIEAGSLNKAIEIK---DLMVSKGLSLTS-STYNTLI 407
Query: 277 GIICTIGPASRNVAVLEKMMETGMNVARMNFS 372
C G A +L++M+ G NV + +F+
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 439
>At5g17170.1 68418.m02012 rubredoxin family protein contains Pfam
profile PF00301: Rubredoxin
Length = 271
Score = 31.1 bits (67), Expect = 0.57
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 421 AEKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTS 576
A K+ ++ P L + G + TG+ GG +A+ LK G+ + T+S
Sbjct: 82 ASKTIEVEVDKPLGLTLGQKQGGGVVITGVDGGGNAAKAGLKSGDQVVYTSS 133
>At2g16770.1 68415.m01923 expressed protein
Length = 249
Score = 30.3 bits (65), Expect = 0.99
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 160 DGEIEAGAVEKPTVANVG-SQLQHMCGLDIDSKSSYIRLSG 279
DGEI A +KP V NV S + H C + D + Y +G
Sbjct: 145 DGEIGAFPYQKPAVTNVPYSYMMHPCNMQCDVDNLYCLQNG 185
>At1g49190.1 68414.m05515 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver domain
;contains similarity to two-component response regulator
protein (ARR2) GI:4210451 from [Arabidopsis thaliana]
Length = 608
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 34 GIQFFTRKGSSRSRKPPVSRNRELTDKYLHYNPLKMVYPTIHDGEIEAGAVEKPTVANVG 213
GIQ +K + RKP ++ EL K+L + P + ++ +E T +NV
Sbjct: 406 GIQNMEKKQGKKPRKPRMTWTEELHQKFLEAIEIIGANPKVLVECLQEMRIEGITRSNVA 465
Query: 214 SQLQ-HMCGLD 243
S LQ H L+
Sbjct: 466 SHLQKHRINLE 476
>At5g67190.1 68418.m08470 AP2 domain-containing transcription
factor, putative similar to AP2 domain containing
protein RAP2.1 (GI:21555563) {Arabidopsis thaliana}
Length = 184
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 241 RDRTYAGAGSRRWRLWAFQLHPPRFRHR 158
RDR Y G R+W W ++ P R R
Sbjct: 17 RDRPYKGIRMRKWGKWVAEIREPNKRSR 44
>At5g51920.1 68418.m06441 expressed protein ; expression supported
by MPSS
Length = 570
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 563 FIVSPFFSSTSAEPPPSKSPVLISGPLVSN 474
F SPF +TS+E PP +P + S L N
Sbjct: 19 FSSSPFHGTTSSEHPPHSTPTVTSATLRRN 48
>At5g44820.1 68418.m05493 expressed protein similar to unknown
protein (pir||T04881)
Length = 367
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/69 (20%), Positives = 33/69 (47%)
Frame = +1
Query: 88 SRNRELTDKYLHYNPLKMVYPTIHDGEIEAGAVEKPTVANVGSQLQHMCGLDIDSKSSYI 267
S NR + + Y ++ ++ YP +HD ++ +P ++ +G Q++ +
Sbjct: 254 SNNRSI-EFYKFWHKSRLDYPDLHDQDVFNRIKHEPFISEIGIQMRFFDTVYFGGFCQTS 312
Query: 268 RLSGIICTI 294
R ++CT+
Sbjct: 313 RDINLVCTM 321
>At4g36900.1 68417.m05231 AP2 domain-containing protein RAP2.10
(RAP2.10) Identical to GP:2632063 and GP:7270639
[Arabidopsis thaliana]; identical to cDNA TINY-like
protein GI:2632062
Length = 196
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -3
Query: 241 RDRTYAGAGSRRWRLWAFQLHPPRFRHR 158
RD+ Y G R+W W ++ P R R
Sbjct: 26 RDKPYKGIRMRKWGKWVAEIREPNKRSR 53
>At5g23020.1 68418.m02691 2-isopropylmalate synthase 2 (IMS2)
identical to 2-isopropylmalate synthase (IMS2)
[Arabidopsis thaliana] GI:12330689
Length = 503
Score = 27.5 bits (58), Expect = 7.0
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Frame = +1
Query: 61 SSRSRKPPVSRNRE-LTDKYLHYNPLKMVYPTIHDGEIEAG-AVEKPTVANVGSQLQHM- 231
S+ KP + R E + +K H N ++++ T+ DGE G A+ P + QL +
Sbjct: 60 SATDLKPIMERRPEYIPNKLPHKNYVRVLDTTLRDGEQSPGAALTPPQKLEIARQLAKLR 119
Query: 232 -----CGLDIDSKSSYIRLSGIICTIG 297
G + S+ + + I T+G
Sbjct: 120 VDIMEVGFPVSSEEEFEAIKTIAKTVG 146
>At2g31270.1 68415.m03818 hydroxyproline-rich glycoprotein family
protein
Length = 571
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 19 ALSRRGIQFFTRKGSSRSRKPPVSRNRELTDKYLHYNPLKMVYPTIHDGEIEAGAV-EKP 195
A S + FF SS S++ ++N E Y L + + + + + KP
Sbjct: 80 ASSAKSRLFFDSSSSSPSKRKSSNKNAEKEKLPEKYENLGKFFEALDNSMLLSKLRGSKP 139
Query: 196 TVANVGSQLQHM 231
T +N+ Q++H+
Sbjct: 140 TFSNISKQIEHL 151
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.131 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,372,396
Number of Sequences: 28952
Number of extensions: 248917
Number of successful extensions: 695
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1151426952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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