Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e16r
(746 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g08310.1 68417.m01372 expressed protein glutamic acid-rich pr... 32 0.46
At4g19230.2 68417.m02837 cytochrome P450 family protein cytochro... 31 0.61
At5g17930.1 68418.m02102 MA3 domain-containing protein low simil... 31 1.1
At5g17240.1 68418.m02020 SET domain-containing protein contains ... 29 3.3
At4g02710.1 68417.m00366 kinase interacting family protein simil... 29 4.3
At5g64710.2 68418.m08135 expressed protein contains Pfam profile... 28 5.7
At5g64710.1 68418.m08134 expressed protein contains Pfam profile... 28 5.7
At5g31412.1 68418.m03722 hypothetical protein contains Pfam doma... 28 5.7
At2g34780.1 68415.m04270 expressed protein 28 5.7
At1g66130.1 68414.m07505 oxidoreductase N-terminal domain-contai... 28 5.7
At2g26780.1 68415.m03212 expressed protein contains Pfam profile... 27 10.0
At2g04230.1 68415.m00410 F-box family protein contains F-box dom... 27 10.0
>At4g08310.1 68417.m01372 expressed protein glutamic acid-rich
protein precursor - Plasmodium falciparum, PIR2:A54514
Length = 504
Score = 31.9 bits (69), Expect = 0.46
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = -3
Query: 717 DEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGK 541
D K +K+H CL+ + DE N L+T + K + P+K+ A L K KDGK
Sbjct: 77 DVHKSFVKQHLVQCLAGAENDETSENSLET-EKKDDVTPVKEAA--ELSKEHTTKKDGK 132
>At4g19230.2 68417.m02837 cytochrome P450 family protein cytochrome
P450, Arabidopsis thaliana; supported by cDNA:
gi_15293092_gb_AY050980.1_
Length = 484
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 381 ERASGLSRGSISHNSRLFGEGCCLCWPGKRQS 476
ERA+G S G +SR C LCWPG R+S
Sbjct: 439 ERATGFSMG----HSRFPKTDCPLCWPGSRRS 466
>At5g17930.1 68418.m02102 MA3 domain-containing protein low
similarity to SP|Q9P6R9 Cell cycle control protein cwf22
{Schizosaccharomyces pombe}; contains Pfam profile
PF02847: MA3 domain
Length = 707
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = -3
Query: 684 ADCLSETKADE--QLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKV 511
A+ ++ET E + LK + + N +K C+++ S+ F+K + L +
Sbjct: 479 AEDIAETMDAEVVEAQKMLKLAEAQRMNTDSRKAIFCVIMSSEDYID--AFEKLLRL-DL 535
Query: 510 PNAEDKLKVEKLIDACLANKGNSPHQTAWNYVKCYHEKDPKHAL 379
P +D+ + L++ CL K + T C H+K+ K L
Sbjct: 536 PGKQDREIMRVLVECCLQEKAFNKFYTVLASKLCEHDKNHKFTL 579
>At5g17240.1 68418.m02020 SET domain-containing protein contains
Pfam profile PF00856: SET domain
Length = 491
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -3
Query: 600 LKKYALCMLI-KSQLMTKDGKFKKDVALAKVPNAEDKLKVEKLIDACLANKGNSPHQTAW 424
LKK L + + + LMT + KD+ L+ N + L +++ CL + + ++ W
Sbjct: 57 LKKGELVLKVPRKALMTTESIIAKDLKLSDAVNLHNSLSSTQILSVCLLYEMSKEKKSFW 116
Query: 423 NYVKCYH 403
Y +H
Sbjct: 117 -YPYLFH 122
>At4g02710.1 68417.m00366 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1111
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 360 DYVFTRKERASGLSRGSISHNSRLFGEGCCL 452
DYVFT +E A +S+G+ + L EG CL
Sbjct: 781 DYVFTHRESAGEVSKGADLMDEFLKLEGMCL 811
>At5g64710.2 68418.m08135 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537
Length = 716
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -3
Query: 741 VVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLI--- 571
VV + + K+N K + + ++ ++ V +K D K + EP+K L +
Sbjct: 237 VVSVEKMCQNMKQNDKDVKEESHQLQESSQEFVQVMKLMDVKAKEEPVKANQLAITAVDD 296
Query: 570 KSQLMTKDGKFKK 532
S KDG KK
Sbjct: 297 VSSFEEKDGFLKK 309
>At5g64710.1 68418.m08134 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537
Length = 841
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -3
Query: 741 VVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLI--- 571
VV + + K+N K + + ++ ++ V +K D K + EP+K L +
Sbjct: 362 VVSVEKMCQNMKQNDKDVKEESHQLQESSQEFVQVMKLMDVKAKEEPVKANQLAITAVDD 421
Query: 570 KSQLMTKDGKFKK 532
S KDG KK
Sbjct: 422 VSSFEEKDGFLKK 434
>At5g31412.1 68418.m03722 hypothetical protein contains Pfam domain,
PF04937: Protein of unknown function (DUF 659)
Length = 433
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -3
Query: 690 HRADCLSETKADEQLVNKLKT-GDFKTENEPLKKYALCMLIKSQLMTKD-GKFKKDVALA 517
H D + E + + K++T GD+K EN L +Y C+L + +D G K + LA
Sbjct: 227 HTVDLMLEAISKLPKMGKMQTFGDYKGENLFLNRYESCVLEWCDVCVEDFGPLMKLLRLA 286
Query: 516 KVPN 505
N
Sbjct: 287 DGEN 290
>At2g34780.1 68415.m04270 expressed protein
Length = 1297
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 137 KRDKQSYDEHRRKLNFGSRSNMLQQLNKIYRTDID 241
+R+ Q + R KL FGS +N + L++ + TD++
Sbjct: 401 RREFQCEELGRLKLEFGSLTNRMNLLDEYFSTDVE 435
>At1g66130.1 68414.m07505 oxidoreductase N-terminal
domain-containing protein similar to AX110P [Daucus
carota] GI:285739; contains Pfam profile PF01408:
Oxidoreductase family NAD-binding Rossmann fold
Length = 364
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 537 KKDVALAKVPNAEDKLKVEKLIDACLANKGNSPHQTAW 424
KK L + P A+D ++EK+++AC N T W
Sbjct: 95 KKKHVLVEKPPAQDATELEKIVEACEYNGVQFMDGTIW 132
>At2g26780.1 68415.m03212 expressed protein contains Pfam profile
TBP (TATA-binding protein) -interacting protein 120
(TIP120); contains TIGRFAM profile TIGR01612:
reticulocyte binding protein
Length = 1866
Score = 27.5 bits (58), Expect = 10.0
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 469 RLPGQQRQQPSPNSLELCEMLPRERPE 389
R P ++R++ +PN+LE LP++ E
Sbjct: 114 RAPAKEREEIAPNTLENVSKLPKQHQE 140
>At2g04230.1 68415.m00410 F-box family protein contains F-box domain
Pfam:PF00646
Length = 448
Score = 27.5 bits (58), Expect = 10.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 507 NAEDKLKVEKLIDACLANKGNSPHQTAWNYVKCYHE 400
++ KL++ KL D L + +P + WN KC E
Sbjct: 333 DSSPKLQILKLTDVYLHDNKTNPDERKWNPPKCAPE 368
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,338,836
Number of Sequences: 28952
Number of extensions: 312176
Number of successful extensions: 762
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -