Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10e15r
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   2.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   2.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   2.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   3.5  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   3.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.7  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 483 GYENSELVPLNALKPSLGNEERTRQIEEALQDNGDDGFGSQS 358
           G+++S   P       LG        +E  QD+GDDG GS +
Sbjct: 155 GHQDSRTSPSGQHLQELGLRLEDANSDE--QDDGDDGQGSST 194


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 483 GYENSELVPLNALKPSLGNEERTRQIEEALQDNGDDGFGSQS 358
           G+++S   P       LG        +E  QD+GDDG GS +
Sbjct: 155 GHQDSRTSPSGQHLQELGLRLEDANSDE--QDDGDDGQGSST 194


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 483 GYENSELVPLNALKPSLGNEERTRQIEEALQDNGDDGFGSQS 358
           G+++S   P       LG        +E  QD+GDDG GS +
Sbjct: 155 GHQDSRTSPSGQHLQELGLRLEDANSDE--QDDGDDGQGSST 194


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 456 MALTLNFHNLKISQHIQ 506
           +ALT   H+L  SQHIQ
Sbjct: 468 LALTSTEHSLSQSQHIQ 484


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 456 MALTLNFHNLKISQHIQ 506
           +ALT   H+L  SQHIQ
Sbjct: 293 LALTSTEHSLSQSQHIQ 309


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
 Frame = -2

Query: 657  HGNKGKLKGKSRPT----SSNKKETEWKAGMPCR 568
            H N  K + + +P+    +S ++  E  AG PCR
Sbjct: 899  HSNGAKEEDEDKPSVSPLTSPRQPAETHAGSPCR 932


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,692
Number of Sequences: 336
Number of extensions: 3545
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)