Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e14r
(796 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16EQ5 Cluster: Rad51A protein, putative; n=1; Aedes ae... 93 6e-18
UniRef50_UPI0000D56FBB Cluster: PREDICTED: similar to RAD51-like... 85 1e-15
UniRef50_O75771 Cluster: DNA repair protein RAD51 homolog 4; n=4... 69 2e-10
UniRef50_UPI0000E46317 Cluster: PREDICTED: similar to Trad; n=1;... 64 3e-09
UniRef50_Q4SEP3 Cluster: Chromosome undetermined SCAF14615, whol... 62 2e-08
UniRef50_Q54PJ7 Cluster: Putative DNA repair protein; n=1; Dicty... 61 3e-08
UniRef50_Q4E2R1 Cluster: DNA recombination and repair protein RA... 58 2e-07
UniRef50_A5UKT8 Cluster: DNA repair protein, RadB; n=1; Methanob... 58 2e-07
UniRef50_Q8GXF0 Cluster: DNA repair protein RAD51 homolog 3; n=5... 58 3e-07
UniRef50_A7DQP6 Cluster: RecA/RadA recombinase-like protein; n=1... 57 4e-07
UniRef50_Q386Q5 Cluster: Recombinase Rad51, putative; n=1; Trypa... 56 1e-06
UniRef50_A0NCA9 Cluster: ENSANGP00000029732; n=2; Culicidae|Rep:... 54 4e-06
UniRef50_UPI0000D56C94 Cluster: PREDICTED: similar to RAD51 homo... 54 5e-06
UniRef50_O27728 Cluster: DNA repair and recombination protein ra... 54 5e-06
UniRef50_UPI0000E249BA Cluster: PREDICTED: RAD51 homolog C; n=1;... 53 1e-05
UniRef50_Q93YY9 Cluster: RAD51C protein; n=1; Chlamydomonas rein... 53 1e-05
UniRef50_Q17A54 Cluster: Spindle-b recombination protein spn-b; ... 53 1e-05
UniRef50_O43502 Cluster: DNA repair protein RAD51 homolog 3; n=3... 53 1e-05
UniRef50_Q2NHD1 Cluster: RadB; n=1; Methanosphaera stadtmanae DS... 52 1e-05
UniRef50_A2XZT8 Cluster: Putative uncharacterized protein; n=2; ... 52 2e-05
UniRef50_Q4Q3T8 Cluster: Recombinase Rad51, putative; n=3; Leish... 52 2e-05
UniRef50_Q9LQQ2 Cluster: DNA repair protein RAD51 homolog 4; n=6... 52 2e-05
UniRef50_A1Z7R8 Cluster: CG2412-PA; n=3; Sophophora|Rep: CG2412-... 51 3e-05
UniRef50_Q8TUJ3 Cluster: DNA repair protein; n=6; Euryarchaeota|... 51 3e-05
UniRef50_Q8SZF1 Cluster: RE02671p; n=3; Sophophora|Rep: RE02671p... 50 5e-05
UniRef50_UPI0000F2B25B Cluster: PREDICTED: similar to RAD51-like... 50 7e-05
UniRef50_Q3LW29 Cluster: DNA recombination and repair protein; n... 50 7e-05
UniRef50_A5DET9 Cluster: Putative uncharacterized protein; n=1; ... 50 7e-05
UniRef50_A1RYZ3 Cluster: Rad51-like; n=1; Thermofilum pendens Hr... 50 7e-05
UniRef50_UPI0000499144 Cluster: DNA repair protein RAD51C; n=1; ... 50 9e-05
UniRef50_Q7ZTX4 Cluster: Zgc:56581; n=6; Euteleostomi|Rep: Zgc:5... 50 9e-05
UniRef50_O50248 Cluster: DNA repair and recombination protein ra... 50 9e-05
UniRef50_O15315 Cluster: DNA repair protein RAD51 homolog 2; n=2... 49 1e-04
UniRef50_Q2FSR3 Cluster: ATPase; n=4; Methanomicrobiales|Rep: AT... 49 2e-04
UniRef50_UPI0000586FDE Cluster: PREDICTED: similar to RAD51L2/RA... 48 2e-04
UniRef50_UPI0000DB74C1 Cluster: PREDICTED: similar to DNA-repair... 48 3e-04
UniRef50_Q00XV2 Cluster: RAD51-like protein 2; n=2; Ostreococcus... 48 4e-04
UniRef50_Q8TWK1 Cluster: RadA recombinase; n=1; Methanopyrus kan... 48 4e-04
UniRef50_Q55075 Cluster: DNA repair and recombination protein ra... 48 4e-04
UniRef50_Q2IEE4 Cluster: Protein recA; n=1; Anaeromyxobacter deh... 47 5e-04
UniRef50_A4S5M9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 47 5e-04
UniRef50_UPI00006CB33C Cluster: hypothetical protein TTHERM_0045... 47 6e-04
UniRef50_Q8ZYR9 Cluster: DNA repair and recombination protein ra... 47 6e-04
UniRef50_A1CPK9 Cluster: DNA repair protein (Rad57), putative; n... 46 8e-04
UniRef50_UPI0000D55904 Cluster: PREDICTED: similar to Meiotic re... 46 0.001
UniRef50_A1RY65 Cluster: Rad51-like; n=1; Thermofilum pendens Hr... 46 0.001
UniRef50_Q6Q241 Cluster: Putative Rad51B protein; n=1; Chlamydom... 46 0.001
UniRef50_Q69KV4 Cluster: Trad-like protein; n=3; Oryza sativa|Re... 46 0.001
UniRef50_A4S2Y8 Cluster: Predicted protein; n=1; Ostreococcus lu... 46 0.001
UniRef50_Q5JDP8 Cluster: ATPase, RecA superfamily; n=1; Thermoco... 46 0.001
UniRef50_O28184 Cluster: DNA repair and recombination protein ra... 46 0.001
UniRef50_Q8PZN5 Cluster: DNA repair and recombination protein ra... 46 0.001
UniRef50_Q1DS44 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_A3LTU6 Cluster: Predicted protein; n=1; Pichia stipitis... 45 0.002
UniRef50_Q96449 Cluster: Meiotic recombination protein DMC1 homo... 45 0.002
UniRef50_Q6CMV0 Cluster: Similar to sp|P25301 Saccharomyces cere... 45 0.003
UniRef50_Q8TVF0 Cluster: RadA recombinase; n=1; Methanopyrus kan... 45 0.003
UniRef50_O93748 Cluster: DNA repair and recombination protein ra... 45 0.003
UniRef50_Q6BWA8 Cluster: Similar to sp|P25301 Saccharomyces cere... 44 0.003
UniRef50_A5DYZ1 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_A2QR86 Cluster: Remark: alternate names = YDR004W; n=1;... 44 0.004
UniRef50_Q6L2I8 Cluster: DNA repair and recombination protein Ra... 44 0.004
UniRef50_Q9HPF2 Cluster: DNA repair and recombination protein ra... 44 0.004
UniRef50_Q1ZXF0 Cluster: Putative DNA repair protein; n=1; Dicty... 44 0.006
UniRef50_Q5A2U1 Cluster: Putative uncharacterized protein RAD57;... 44 0.006
UniRef50_Q55WG1 Cluster: Putative uncharacterized protein; n=1; ... 44 0.006
UniRef50_Q2USE9 Cluster: Predicted protein; n=6; Trichocomaceae|... 44 0.006
UniRef50_UPI000065EE6A Cluster: DNA-repair protein XRCC3 (X-ray ... 43 0.008
UniRef50_Q01C18 Cluster: Rad51B protein; n=2; Ostreococcus|Rep: ... 43 0.008
UniRef50_Q4N299 Cluster: Putative uncharacterized protein; n=2; ... 43 0.010
UniRef50_UPI0000E47207 Cluster: PREDICTED: hypothetical protein;... 42 0.013
UniRef50_Q49593 Cluster: DNA repair and recombination protein ra... 42 0.013
UniRef50_Q9HMM4 Cluster: DNA repair and recombination protein ra... 42 0.013
UniRef50_Q06609 Cluster: DNA repair protein RAD51 homolog 1; n=2... 42 0.013
UniRef50_Q6YU07 Cluster: Putative XRCC3; n=2; Oryza sativa|Rep: ... 42 0.018
UniRef50_A2ZKR2 Cluster: Putative uncharacterized protein; n=2; ... 42 0.018
UniRef50_Q9PR61 Cluster: Protein recA; n=1; Ureaplasma parvum|Re... 42 0.024
UniRef50_P25454 Cluster: DNA repair protein RAD51; n=111; Eukary... 42 0.024
UniRef50_Q0D0U2 Cluster: Putative uncharacterized protein; n=1; ... 41 0.031
UniRef50_O43542 Cluster: DNA-repair protein XRCC3; n=19; Euteleo... 41 0.031
UniRef50_Q9UUL2 Cluster: DNA repair protein rhp57; n=1; Schizosa... 41 0.031
UniRef50_Q27297 Cluster: DNA repair protein Rad51 homolog; n=12;... 41 0.031
UniRef50_Q9SK02 Cluster: DNA repair protein RAD51 homolog 2; n=6... 41 0.031
UniRef50_A4XGH9 Cluster: RecA-superfamily ATPase implicated in s... 41 0.041
UniRef50_Q8SZ30 Cluster: RE19845p; n=2; Sophophora|Rep: RE19845p... 41 0.041
UniRef50_A2DYQ0 Cluster: Putative uncharacterized protein; n=1; ... 41 0.041
UniRef50_Q8ZTI5 Cluster: DNA repair protein radA; n=5; Pyrobacul... 41 0.041
UniRef50_Q9P6E6 Cluster: Related to RAD57 protein; n=2; Neurospo... 40 0.054
UniRef50_Q2GW05 Cluster: Putative uncharacterized protein; n=1; ... 40 0.054
UniRef50_Q18FI4 Cluster: DNA repair and recombination protein Ra... 40 0.054
UniRef50_Q9HJD3 Cluster: DNA repair and recombination protein ra... 40 0.054
UniRef50_Q9V2F6 Cluster: DNA repair and recombination protein ra... 40 0.054
UniRef50_Q99131 Cluster: REC2 protein; n=1; Ustilago maydis|Rep:... 40 0.072
UniRef50_A7D6F3 Cluster: KaiC domain protein; n=1; Halorubrum la... 40 0.072
UniRef50_A6QWV8 Cluster: Predicted protein; n=1; Ajellomyces cap... 40 0.095
UniRef50_Q9SX38 Cluster: Putative disease resistance protein At1... 40 0.095
UniRef50_Q657A2 Cluster: DNA repair protein radA (RadA)-like; n=... 39 0.13
UniRef50_A6RPX0 Cluster: Putative uncharacterized protein; n=2; ... 39 0.13
UniRef50_Q12V32 Cluster: KaiC; n=1; Methanococcoides burtonii DS... 39 0.13
UniRef50_UPI000023E7C1 Cluster: hypothetical protein FG00844.1; ... 39 0.17
UniRef50_Q02AB2 Cluster: RecA domain protein; n=1; Solibacter us... 39 0.17
UniRef50_Q8I9U4 Cluster: Recombinase Rad51; n=7; Aconoidasida|Re... 39 0.17
UniRef50_A7ATP8 Cluster: Rad51 protein, putative; n=1; Babesia b... 39 0.17
UniRef50_Q30L73 Cluster: Gp72; n=1; Listeria phage P100|Rep: Gp7... 38 0.22
UniRef50_Q1DNF7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.22
UniRef50_A7E7I5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.22
UniRef50_Q2Y4W8 Cluster: Putative uncharacterized protein C5_003... 38 0.22
UniRef50_O14129 Cluster: DNA repair protein rhp55; n=1; Schizosa... 38 0.22
UniRef50_Q189H2 Cluster: Putative phage-related replicative heli... 38 0.29
UniRef50_Q7RD33 Cluster: DNA repair protein rhp51; n=1; Plasmodi... 38 0.29
UniRef50_O61128 Cluster: Dmc1 homolog; n=11; Eukaryota|Rep: Dmc1... 38 0.29
UniRef50_Q0W7M8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.29
UniRef50_P25301 Cluster: DNA repair protein RAD57; n=2; Saccharo... 38 0.29
UniRef50_P25453 Cluster: Meiotic recombination protein DMC1; n=3... 38 0.29
UniRef50_Q3ADP9 Cluster: Conserved domain protein; n=1; Carboxyd... 38 0.38
UniRef50_Q54QU4 Cluster: AAA ATPase domain-containing protein; n... 38 0.38
UniRef50_A0DFA4 Cluster: Chromosome undetermined scaffold_49, wh... 38 0.38
UniRef50_A6R196 Cluster: DNA repair protein RAD51; n=1; Ajellomy... 38 0.38
UniRef50_A4R1B5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.38
UniRef50_A5HL42 Cluster: DNA primase/helicase; n=1; Phormidium p... 37 0.51
UniRef50_A7SD26 Cluster: Predicted protein; n=1; Nematostella ve... 37 0.51
UniRef50_Q6CPZ2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 37 0.51
UniRef50_A7D6B3 Cluster: KaiC domain protein; n=6; cellular orga... 37 0.51
UniRef50_Q4A748 Cluster: Chromosomal replication initiator prote... 37 0.67
UniRef50_A6FAX0 Cluster: Protein kinase domain protein; n=1; Mor... 37 0.67
UniRef50_A4G1Y6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.67
UniRef50_A7IAV9 Cluster: HTR-like protein; n=1; Candidatus Metha... 37 0.67
UniRef50_UPI00005889FA Cluster: PREDICTED: similar to LOC553395 ... 36 0.89
UniRef50_UPI0000585DAC Cluster: PREDICTED: similar to RAD51-like... 36 0.89
UniRef50_Q1VUX3 Cluster: Putative uncharacterized protein; n=3; ... 36 0.89
UniRef50_A6Q0W7 Cluster: Circadian clock protein KaiC; n=1; Nitr... 36 0.89
UniRef50_Q00YW7 Cluster: Meiotic recombination protein DMC1, put... 36 0.89
UniRef50_Q4Z9W4 Cluster: ORF021; n=4; unclassified Myoviridae|Re... 36 0.89
UniRef50_Q6C269 Cluster: Yarrowia lipolytica chromosome F of str... 36 0.89
UniRef50_A6LZR9 Cluster: AAA ATPase; n=8; Clostridium|Rep: AAA A... 36 1.2
UniRef50_A5D4Z4 Cluster: BioD-like N-terminal domain of phosphot... 36 1.2
UniRef50_Q2R1G4 Cluster: RGH2A, putative; n=5; Eukaryota|Rep: RG... 36 1.2
UniRef50_A6STQ0 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_P47581 Cluster: Protein recA; n=2; Mycoplasma|Rep: Prot... 36 1.2
UniRef50_UPI0000DAE4B2 Cluster: hypothetical protein Rgryl_01000... 36 1.5
UniRef50_Q89T73 Cluster: Protein recA; n=9; Bacteria|Rep: Protei... 36 1.5
UniRef50_Q57192 Cluster: L.oenos plasmid p4028 ORF1, ORF2, ORF3,... 36 1.5
UniRef50_Q1QT32 Cluster: Putative circadian clock protein, KaiC;... 36 1.5
UniRef50_Q54G98 Cluster: AAA ATPase domain-containing protein; n... 36 1.5
UniRef50_Q1JSB1 Cluster: Putative uncharacterized protein; n=1; ... 36 1.5
UniRef50_A7TGZ2 Cluster: Putative uncharacterized protein; n=1; ... 36 1.5
UniRef50_Q566S1 Cluster: LOC553395 protein; n=4; Danio rerio|Rep... 35 2.0
UniRef50_A5NQF2 Cluster: KaiC domain protein; n=1; Methylobacter... 35 2.0
UniRef50_Q384W8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_Q0V430 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_Q12VV6 Cluster: KaiC; n=1; Methanococcoides burtonii DS... 35 2.0
UniRef50_Q8EVC7 Cluster: Protein recA; n=2; Mycoplasma|Rep: Prot... 35 2.0
UniRef50_Q48N05 Cluster: Circadian oscillation regulator KaiC ho... 35 2.7
UniRef50_Q0HEC7 Cluster: KAP P-loop domain protein; n=3; Shewane... 35 2.7
UniRef50_A4XK90 Cluster: Putative circadian clock protein, KaiC;... 35 2.7
UniRef50_Q4CYK4 Cluster: DNA repair protein, putative; n=2; Tryp... 35 2.7
UniRef50_Q6FIZ6 Cluster: Similar to sp|P25301 Saccharomyces cere... 35 2.7
UniRef50_Q0W7N5 Cluster: Predicted ATPase; n=1; uncultured metha... 35 2.7
UniRef50_Q7D3Y2 Cluster: AGR_pAT_129p; n=4; Rhizobiaceae|Rep: AG... 34 3.6
UniRef50_Q08XB9 Cluster: KaiC domain protein; n=1; Stigmatella a... 34 3.6
UniRef50_A5ZGX7 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
UniRef50_Q3IA99 Cluster: Disease resistance protein; n=1; Phaseo... 34 3.6
UniRef50_Q5B8N2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
UniRef50_A6SQA9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
UniRef50_Q12XV7 Cluster: KaiC; n=1; Methanococcoides burtonii DS... 34 3.6
UniRef50_Q9FKM5 Cluster: DNA-repair protein XRCC3 homolog; n=18;... 34 3.6
UniRef50_Q0AB05 Cluster: Putative circadian clock protein, KaiC;... 34 4.7
UniRef50_Q08YR0 Cluster: Putative uncharacterized protein; n=1; ... 34 4.7
UniRef50_A5KMI4 Cluster: Putative uncharacterized protein; n=1; ... 34 4.7
UniRef50_Q580V2 Cluster: DNA repair protein, putative; n=1; Tryp... 34 4.7
UniRef50_A3FQK6 Cluster: Putative uncharacterized protein; n=1; ... 34 4.7
UniRef50_Q757K4 Cluster: AER008Wp; n=1; Eremothecium gossypii|Re... 34 4.7
UniRef50_Q74ZR1 Cluster: AGR137Wp; n=1; Eremothecium gossypii|Re... 34 4.7
UniRef50_Q0W053 Cluster: Putative ATPase; n=1; uncultured methan... 34 4.7
UniRef50_A3KGH9 Cluster: RAD51 homolog; n=13; Eukaryota|Rep: RAD... 33 6.2
UniRef50_Q9RVC4 Cluster: DNA repair protein radA; n=4; Deinococc... 33 6.2
UniRef50_Q82J09 Cluster: Putative ATP/GTP-binding protein; n=3; ... 33 6.2
UniRef50_Q73P83 Cluster: ABC transporter, ATP-binding/permease p... 33 6.2
UniRef50_Q6HQL4 Cluster: ABC transporter ATP-binding protein, N-... 33 6.2
UniRef50_A5D488 Cluster: RecA-superfamily ATPase; n=1; Pelotomac... 33 6.2
UniRef50_A2UBG3 Cluster: Cobyrinic acid a,c-diamide synthase; n=... 33 6.2
UniRef50_Q5ULN8 Cluster: Orf76; n=1; Lactobacillus phage LP65|Re... 33 6.2
UniRef50_Q4CWC1 Cluster: DNA repair protein, putative; n=3; Tryp... 33 6.2
UniRef50_Q24DN8 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_A5K641 Cluster: Putative uncharacterized protein; n=2; ... 33 6.2
UniRef50_Q7S8S8 Cluster: Putative uncharacterized protein NCU088... 33 6.2
UniRef50_Q6FM82 Cluster: Similar to sp|P38953 Saccharomyces cere... 33 6.2
UniRef50_Q4PC21 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_A2BKD6 Cluster: Universally conserved protein; n=1; Hyp... 33 6.2
UniRef50_P08098 Cluster: Mobilization protein A; n=6; Enterobact... 33 6.2
UniRef50_UPI00015B60FD Cluster: PREDICTED: similar to disheveled... 33 8.3
UniRef50_Q5PF37 Cluster: DNA replication; n=18; root|Rep: DNA re... 33 8.3
UniRef50_Q1PXH1 Cluster: Putative uncharacterized protein; n=1; ... 33 8.3
UniRef50_Q1CXY6 Cluster: Putative uncharacterized protein; n=2; ... 33 8.3
UniRef50_Q7RTC3 Cluster: Putative uncharacterized protein PY0007... 33 8.3
UniRef50_Q6FIK9 Cluster: Similar to sp|P36224 Saccharomyces cere... 33 8.3
UniRef50_Q5UXD0 Cluster: Circadian regulator; n=3; Halobacteriac... 33 8.3
>UniRef50_Q16EQ5 Cluster: Rad51A protein, putative; n=1; Aedes
aegypti|Rep: Rad51A protein, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 329
Score = 93.5 bits (222), Expect = 6e-18
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 1/220 (0%)
Frame = -3
Query: 746 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDF 567
++ + LD +L G+ + E+ G + SGKTQ+ + +A N A+ V Y+DTK DF
Sbjct: 82 LKTGIRGLDLLLEGGLLPGHVMEIFGDSSSGKTQICVTMAANIARNHKFDVFYVDTKCDF 141
Query: 566 SALRIQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNLKNGEXXXXXXXXXXXX 387
A RI KILE + S +E+ M RI + I + E L+ ++L
Sbjct: 142 FARRIHKILELNKCSVQEIQETMGRIKVERILSPESLIKTMEDLLIRVDDLKNFKVLIID 201
Query: 386 XLPSLMFQYLGEDNK-LGLSLLNSFVNYSRFICKQLNIGIICINMQTRWVDQDLTDVEDE 210
LP L +QY ++ L +L + R + + I I+ +N++ D T
Sbjct: 202 SLPPLWYQYQNTKSRCYPLGMLTRLIGLLRKLATENLISIVLVNLKITAYDSFSTGGGGS 261
Query: 209 ENSTAYKDSFTEKRYRCLGRYWQHIPTLVLELEKIKENDN 90
+ A + + E Y LGR+W+ PT + + KI+ N +
Sbjct: 262 RRAMANQRNSNE--YPALGRFWETAPTTRILMSKIESNSS 299
>UniRef50_UPI0000D56FBB Cluster: PREDICTED: similar to RAD51-like 3;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
RAD51-like 3 - Tribolium castaneum
Length = 339
Score = 85.4 bits (202), Expect = 1e-15
Identities = 59/228 (25%), Positives = 101/228 (44%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALR 555
+ +D +LN G+ I ELCG SGKT L + N + V DTK DFSA++
Sbjct: 112 IKGVDQLLNGGLFTGNIYELCGPPASGKTHFVLTLIKNVILNMDQNVHIFDTKNDFSAVK 171
Query: 554 IQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNLKNGEXXXXXXXXXXXXXLPS 375
++++L+ C + + + +I ++ +T +L+N +KN LP
Sbjct: 172 MKQMLKNCDEDRRTKS--LGKIIVNRCYTRYDLINSLYEIKNDLENNMKLRLIIVDSLPG 229
Query: 374 LMFQYLGEDNKLGLSLLNSFVNYSRFICKQLNIGIICINMQTRWVDQDLTDVEDEENSTA 195
++ D+ LN N R+I + ++ + N+ T W D ++
Sbjct: 230 VILN--SNDHLTNNLYLNHIANIMRYIATEHHVAFLVTNLITTWTDGGFKTQQE------ 281
Query: 194 YKDSFTEKRYRCLGRYWQHIPTLVLELEKIKENDNENNSGIKITVLHS 51
T + C G+YW +P L +EK+ EN+ G K++VL S
Sbjct: 282 -----TSETITC-GKYWSSVPNTRLRIEKM-----ENSGGCKLSVLRS 318
>UniRef50_O75771 Cluster: DNA repair protein RAD51 homolog 4; n=42;
Euteleostomi|Rep: DNA repair protein RAD51 homolog 4 -
Homo sapiens (Human)
Length = 328
Score = 68.5 bits (160), Expect = 2e-10
Identities = 40/168 (23%), Positives = 82/168 (48%), Gaps = 5/168 (2%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALR 555
+ SLD +L+ G+ +TE+ G GSGKTQ+ L +A N A + VLY+D+ G +A R
Sbjct: 86 IGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVLYVDSNGGLTASR 145
Query: 554 IQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNLKNGEXXXXXXXXXX-----X 390
+ ++L+ +E A + RI + + + + +++++ + L+
Sbjct: 146 LLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQMLDVLQELRGTVAQQVTGSSGTVKVVVV 205
Query: 389 XXLPSLMFQYLGEDNKLGLSLLNSFVNYSRFICKQLNIGIICINMQTR 246
+ +++ LG + GL+L+ + + + L + ++ N TR
Sbjct: 206 DSVTAVVSPLLGGQQREGLALMMQLARELKTLARDLGMAVVVTNHITR 253
>UniRef50_UPI0000E46317 Cluster: PREDICTED: similar to Trad; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
Trad - Strongylocentrotus purpuratus
Length = 208
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/99 (32%), Positives = 57/99 (57%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQ 549
S+D +L+ G+ +TE+ G A GKTQ L +A A + + VL+IDT G F A R+
Sbjct: 51 SIDKLLDGGVYTSELTEIVGQAAVGKTQFCLTLASCVAVSSEQNVLFIDTNGGFHASRLH 110
Query: 548 KILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNLK 432
I+ S K +A + ++H + + + +L++L +++K
Sbjct: 111 DIIAHKSTSEKITSAALHKVHCATTFDLYDLLDLLESIK 149
>UniRef50_Q4SEP3 Cluster: Chromosome undetermined SCAF14615, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14615, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 332
Score = 62.1 bits (144), Expect = 2e-08
Identities = 52/224 (23%), Positives = 92/224 (41%), Gaps = 15/224 (6%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQ 549
SLD +L+ G ITEL G GSGK+Q+ A++ + ++V+++DT G +A R+
Sbjct: 88 SLDKLLDSGFYTGEITELSGGPGSGKSQVCFAAAVHISLHLKQSVVFVDTTGGLTAGRLL 147
Query: 548 KILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNLKNG-----EXXXXXXXXXXXXX 384
++LE E + RIH+ ++ + L++ L+ G
Sbjct: 148 QMLEAESSKRDEQMEALQRIHVFRLFDVFSLLDCLYALRAGTLQQVSVGGGSVKAVIVDS 207
Query: 383 LPSLMFQYLGEDNKLGLSLLNSFVNYSRFICKQLNIGIICINMQTRWVDQDLTDVEDEEN 204
+ +++ LG G+SL+ + I K NI + + + W L D
Sbjct: 208 VSAVIAPVLGGKQNEGMSLMTQVGGVLKTIAKDFNIAAL-VRVSATWAPAGLRDALRVLT 266
Query: 203 STAYKDSFTEKRYRC----------LGRYWQHIPTLVLELEKIK 102
K F + LG W H+P + LE+++
Sbjct: 267 LPDCKRPFQVTNHVTRGVGGEVQPGLGMSWSHVPRTRILLERVE 310
>UniRef50_Q54PJ7 Cluster: Putative DNA repair protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative DNA repair
protein - Dictyostelium discoideum AX4
Length = 381
Score = 61.3 bits (142), Expect = 3e-08
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCA-----KETHKTVLYIDTKGDF 567
S +D MLN G P K ITE+CG+ G GKT +A Q+ +N + +YIDT+G +
Sbjct: 69 SEIDQMLNGGTPLKKITEICGVPGIGKTNMAFQLLVNTSIPFDLGGVQGKAIYIDTEGSY 128
Query: 566 SALRIQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVN 450
S R++++ + V +YI T+E ++N
Sbjct: 129 SCQRVREMATHLVNHLECVLLKNPMTQTTYIPTVETVLN 167
>UniRef50_Q4E2R1 Cluster: DNA recombination and repair protein
RAD51, putative; n=1; Trypanosoma cruzi|Rep: DNA
recombination and repair protein RAD51, putative -
Trypanosoma cruzi
Length = 492
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINC--AKE---THKTVLYIDTKGDFSA 561
+D +L G+P ++E+CG G GKTQ+ +Q+A+NC +E H + L+IDT+G F
Sbjct: 130 IDTLLGGGLPVGAVSEVCGAPGVGKTQMLMQLAVNCLLPRELGGLHGSCLFIDTEGSFVP 189
Query: 560 LRIQKILEKCQYSFKEV 510
R ++I KE+
Sbjct: 190 ERFREIAHAAVMQVKEI 206
>UniRef50_A5UKT8 Cluster: DNA repair protein, RadB; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: DNA repair
protein, RadB - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 234
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/63 (42%), Positives = 45/63 (71%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRI 552
S +DN+L+ G+ T+T++ G GSGK+ ++L +A+N AK+ K V+Y+DT+G S RI
Sbjct: 17 SGIDNLLDGGVEKGTVTQIFGPPGSGKSNISLVLAVNVAKQ-GKKVVYVDTEGGISINRI 75
Query: 551 QKI 543
++I
Sbjct: 76 KQI 78
>UniRef50_Q8GXF0 Cluster: DNA repair protein RAD51 homolog 3; n=5;
Magnoliophyta|Rep: DNA repair protein RAD51 homolog 3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 363
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Frame = -3
Query: 737 SVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAIN------CAKETHKTVLYIDTK 576
S S LDN+L GI + +TE+ G+ G GKTQ+ +Q+++N C K + YIDT+
Sbjct: 108 SCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPRECGGLGGKAI-YIDTE 166
Query: 575 GDFSALRIQKILEKCQYSFKEVAAIMSR 492
G F R +I E C +E M +
Sbjct: 167 GSFMVERALQIAEACVEDMEEYTGYMHK 194
>UniRef50_A7DQP6 Cluster: RecA/RadA recombinase-like protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: RecA/RadA
recombinase-like protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 217
Score = 57.2 bits (132), Expect = 4e-07
Identities = 41/144 (28%), Positives = 67/144 (46%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALR 555
+ LD L GIP I ++ G G+GKTQL LQ+AIN K+ VLY DT G F R
Sbjct: 6 LEKLDKSLFGGIPNGVIVDIFGKNGTGKTQLLLQLAINSIKKGGH-VLYFDTTGGF---R 61
Query: 554 IQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNLKNGEXXXXXXXXXXXXXLPS 375
++IL+ Q + + +++I +S + E +N KN++
Sbjct: 62 PERILD-IQKESESQSDFLNQITVSRLTNTSEQINSIKNIERNFSLIVIDNITDLFSYEY 120
Query: 374 LMFQYLGEDNKLGLSLLNSFVNYS 303
+ + E N L + ++ N++
Sbjct: 121 QKDESIFEKNSLFMKYMHDLANFA 144
>UniRef50_Q386Q5 Cluster: Recombinase Rad51, putative; n=1;
Trypanosoma brucei|Rep: Recombinase Rad51, putative -
Trypanosoma brucei
Length = 507
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCA--KE---THKTVLYIDTKGDFS 564
SLD +L G+ T+TE+CG G GKTQL++Q+A+NC KE L+IDT+G F
Sbjct: 112 SLDILLGGGLQVGTLTEICGPPGVGKTQLSMQLAVNCVLPKELGGLQGGCLFIDTEGSFL 171
Query: 563 ALRIQKILEKCQYSFKEV 510
R ++I +E+
Sbjct: 172 PERFREIASAAVGHVREI 189
>UniRef50_A0NCA9 Cluster: ENSANGP00000029732; n=2; Culicidae|Rep:
ENSANGP00000029732 - Anopheles gambiae str. PEST
Length = 290
Score = 54.0 bits (124), Expect = 4e-06
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINC-----AKETHKTVLYIDTKGDFSA 561
LD L GIP ITELCG GSGKTQL LQ+A+N +Y+DT F
Sbjct: 26 LDLALGSGIPEGMITELCGPPGSGKTQLCLQLAVNVQIPQQLGGLQGRAVYLDTNYGFFP 85
Query: 560 LRIQKILEKCQYSFKEVAAI 501
R+Q++ + C +A +
Sbjct: 86 QRVQEMAKACHNHCANIALL 105
>UniRef50_UPI0000D56C94 Cluster: PREDICTED: similar to RAD51 homolog
C isoform 1; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RAD51 homolog C isoform 1 - Tribolium
castaneum
Length = 221
Score = 53.6 bits (123), Expect = 5e-06
Identities = 28/82 (34%), Positives = 50/82 (60%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALR 555
+ LD +L++ I + +TELCG+ G+G+TQ+ L +A+ A ET ++I T + S R
Sbjct: 71 IPQLDCLLSKEIASGVVTELCGLPGTGRTQICLHLAVGVAGET----VFIHTNNNLSVER 126
Query: 554 IQKILEKCQYSFKEVAAIMSRI 489
+++I EK +V A+M ++
Sbjct: 127 LKEIAEK---FVPDVGALMQKL 145
>UniRef50_O27728 Cluster: DNA repair and recombination protein radB;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: DNA repair and recombination protein radB -
Methanobacterium thermoautotrophicum
Length = 234
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/63 (39%), Positives = 41/63 (65%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRI 552
SS+D +L G+ +TIT+ G GSGKT + +++A+ A+ TV +IDT+G S RI
Sbjct: 17 SSIDRILGGGVERRTITQFYGPPGSGKTNITIKLAVETARRGKNTV-FIDTEGGLSVERI 75
Query: 551 QKI 543
+++
Sbjct: 76 RQV 78
>UniRef50_UPI0000E249BA Cluster: PREDICTED: RAD51 homolog C; n=1;
Pan troglodytes|Rep: PREDICTED: RAD51 homolog C - Pan
troglodytes
Length = 461
Score = 52.8 bits (121), Expect = 1e-05
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAIN-----CAKETHKTVLYIDTKGDF 567
S+LD++L G+P TE+CG G GKTQL +Q+A++ C ++IDT+G F
Sbjct: 150 SALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSF 209
Query: 566 SALRIQKILEKC 531
R+ + C
Sbjct: 210 MVDRVVDLATAC 221
>UniRef50_Q93YY9 Cluster: RAD51C protein; n=1; Chlamydomonas
reinhardtii|Rep: RAD51C protein - Chlamydomonas
reinhardtii
Length = 352
Score = 52.8 bits (121), Expect = 1e-05
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAIN-----CAKETHKTVLYIDTKGDFSA 561
LD +L G+ A +TE CG+ G GKTQL +Q+A+N +YIDT+G F A
Sbjct: 100 LDALLGGGVAAGQVTEFCGVPGVGKTQLGMQLAVNVQIPRSLSGPEGQAVYIDTEGSFMA 159
Query: 560 LRIQKILE 537
R I E
Sbjct: 160 ERCADIAE 167
>UniRef50_Q17A54 Cluster: Spindle-b recombination protein spn-b;
n=1; Aedes aegypti|Rep: Spindle-b recombination protein
spn-b - Aedes aegypti (Yellowfever mosquito)
Length = 266
Score = 52.8 bits (121), Expect = 1e-05
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 3/180 (1%)
Frame = -3
Query: 746 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAK--ETHKTVLYIDTKG 573
++ V +LD + GI ++ I E+ G GSGKTQ+ L +A+ C ET K V+YI T+
Sbjct: 30 IKLGVDALDQLTGGGISSRGIVEIAGDPGSGKTQMCLHLALACQMQCETRKGVVYISTEH 89
Query: 572 DFSALRIQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNLKNGEXXXXXXXXXX 393
F + R+ ++ + + + + M ++ + V L + +
Sbjct: 90 PFPSKRLVQMEQVMKRNLRITEDSMKFTDNIFVEHLNTAVALEECVNQRLPILLENNPIS 149
Query: 392 XXXLPSLMFQYLGEDNKLGLS-LLNSFVNYSRFICKQLNIGIICINMQTRWVDQDLTDVE 216
+ S+ Y E N + + VN + + + G++C N VD D E
Sbjct: 150 LLIIDSITAAYTEEQNFVDRAHSFRRVVNALHSLQDKFDFGVLCTNQVRSVVDSSTLDDE 209
>UniRef50_O43502 Cluster: DNA repair protein RAD51 homolog 3; n=32;
Euteleostomi|Rep: DNA repair protein RAD51 homolog 3 -
Homo sapiens (Human)
Length = 376
Score = 52.8 bits (121), Expect = 1e-05
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAIN-----CAKETHKTVLYIDTKGDF 567
S+LD++L G+P TE+CG G GKTQL +Q+A++ C ++IDT+G F
Sbjct: 105 SALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSF 164
Query: 566 SALRIQKILEKC 531
R+ + C
Sbjct: 165 MVDRVVDLATAC 176
>UniRef50_Q2NHD1 Cluster: RadB; n=1; Methanosphaera stadtmanae DSM
3091|Rep: RadB - Methanosphaera stadtmanae (strain DSM
3091)
Length = 232
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/63 (46%), Positives = 37/63 (58%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRI 552
SSLD +L GI IT+ G GSGKT +AL+I K K + Y+DT+G S RI
Sbjct: 17 SSLDKLLGGGIEKGCITQFYGPPGSGKTNIALKILYEATKNGSKAI-YMDTEGGLSLERI 75
Query: 551 QKI 543
Q+I
Sbjct: 76 QQI 78
>UniRef50_A2XZT8 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 353
Score = 52.0 bits (119), Expect = 2e-05
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Frame = -3
Query: 737 SVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI-----NCAKETHKTVLYIDTKG 573
++ LD L+ GIPA +TE+ G +G GKTQ L++A+ C + VLYIDT+
Sbjct: 85 TLRGLDEALHGGIPAGKLTEVVGPSGIGKTQFCLKLALLATLPECYGGLNGRVLYIDTES 144
Query: 572 DFSALRIQKILEK 534
FS+ R+ +I EK
Sbjct: 145 KFSSRRMIEIGEK 157
>UniRef50_Q4Q3T8 Cluster: Recombinase Rad51, putative; n=3;
Leishmania|Rep: Recombinase Rad51, putative - Leishmania
major
Length = 687
Score = 52.0 bits (119), Expect = 2e-05
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETH-----KTVLYIDTKGDFSA 561
LD +L G+P +TE+ G G GKTQL +Q+A++CA L++DT+G F A
Sbjct: 229 LDGVLGGGVPVGGVTEISGPPGVGKTQLLMQLAVSCAMPVEFGGMGGACLFVDTEGSFVA 288
Query: 560 LRIQKI 543
R++++
Sbjct: 289 ERLEQM 294
>UniRef50_Q9LQQ2 Cluster: DNA repair protein RAD51 homolog 4; n=6;
Arabidopsis thaliana|Rep: DNA repair protein RAD51
homolog 4 - Arabidopsis thaliana (Mouse-ear cress)
Length = 322
Score = 51.6 bits (118), Expect = 2e-05
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = -3
Query: 722 DNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQKI 543
D++L G +TEL G + SGKTQ +Q A + A+ VLY+DT FSA RI +
Sbjct: 97 DSLLQGGFREGQLTELVGPSSSGKTQFCMQAAASVAENHLGRVLYLDTGNSFSARRIAQF 156
Query: 542 LEKCQYSFKEVA-AIMSRIHISYIWTMEELVNLFKNLK 432
+ C S + +MSRI ++ + L + ++L+
Sbjct: 157 I--CSSSDATLGQKVMSRILCHTVYDIYTLFDTLQDLE 192
>UniRef50_A1Z7R8 Cluster: CG2412-PA; n=3; Sophophora|Rep: CG2412-PA
- Drosophila melanogaster (Fruit fly)
Length = 184
Score = 51.2 bits (117), Expect = 3e-05
Identities = 29/83 (34%), Positives = 44/83 (53%)
Frame = -3
Query: 686 ITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQKILEKCQYSFKEVA 507
+ ELCG G GKTQL +A+N + + VL+IDTK +FS RIQ +L + +
Sbjct: 23 VWELCGQPGVGKTQLLYTLALNFVWKHSQAVLFIDTKREFSCKRIQDMLRAREVDEEASE 82
Query: 506 AIMSRIHISYIWTMEELVNLFKN 438
M I + T ++ +L K+
Sbjct: 83 RAMKGIRVVQAATGADINDLLKS 105
>UniRef50_Q8TUJ3 Cluster: DNA repair protein; n=6;
Euryarchaeota|Rep: DNA repair protein - Methanosarcina
acetivorans
Length = 267
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/61 (39%), Positives = 40/61 (65%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQK 546
LD +L G +T++ G AG+GKT + +Q+A+ C K+ K V++IDT+G S +R ++
Sbjct: 57 LDELLGGGFERGIVTQVFGAAGTGKTNICIQLAVECVKQGQK-VIFIDTEG-LSPVRFKQ 114
Query: 545 I 543
I
Sbjct: 115 I 115
>UniRef50_Q8SZF1 Cluster: RE02671p; n=3; Sophophora|Rep: RE02671p -
Drosophila melanogaster (Fruit fly)
Length = 341
Score = 50.4 bits (115), Expect = 5e-05
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Frame = -3
Query: 746 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIA--INCAKE---THKTVLYID 582
+ + S+LD G+ + ITELCG AG GKT+L LQ++ + +E K V YI
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTELLLQLSLCVQLPRELGGLGKGVAYIC 147
Query: 581 TKGDFSALRIQKILEKCQYSFKEV 510
T+ F A R+ ++ + C+ E+
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEM 171
>UniRef50_UPI0000F2B25B Cluster: PREDICTED: similar to RAD51-like 1
(S. cerevisiae),; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to RAD51-like 1 (S. cerevisiae), -
Monodelphis domestica
Length = 396
Score = 50.0 bits (114), Expect = 7e-05
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKET-----HKTVLYIDTKGDFS 564
SLD L+ G+ ++TE+ G +G GKTQ + +++ T V+YIDT+ FS
Sbjct: 89 SLDEALHGGVACGSLTEITGPSGCGKTQFCMMMSVLATLPTGMGGLEGAVIYIDTESAFS 148
Query: 563 ALRIQKILEKCQYSF----KEVAAIMSRIHISYIWTMEELVNLFKNLK 432
A R+ +I E SF +++ ++ S+IH+ T E++ ++L+
Sbjct: 149 AERLIRIAEFRFPSFFNTEEKLLSMSSKIHLYKELTCNEVLKRIESLE 196
>UniRef50_Q3LW29 Cluster: DNA recombination and repair protein; n=1;
Bigelowiella natans|Rep: DNA recombination and repair
protein - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 331
Score = 50.0 bits (114), Expect = 7e-05
Identities = 38/163 (23%), Positives = 75/163 (46%), Gaps = 6/163 (3%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETH-----KTVLYIDTKGDFS 564
++DN+L GI + ++TE+ G + +GKTQ + ++ + + K V+YIDT+G+F
Sbjct: 99 TIDNLLEGGIESSSVTEIFGESKTGKTQFCHILCVSAMVDNYSFVQTKKVIYIDTEGNFR 158
Query: 563 ALRIQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNLKNGEXXXXXXXXXXXXX 384
R+ +I EK + +F +++ + + + E L +
Sbjct: 159 PERLIEISEKFKINFD---FLINNVFYARAFNTEHQFQLLVAAASITAFSNVALIIVDSC 215
Query: 383 LPSLMFQYLGEDNK-LGLSLLNSFVNYSRFICKQLNIGIICIN 258
L +Y+G L +LL F+ + + ++ NI I+ N
Sbjct: 216 TALLRTEYVGRGELFLRQTLLGKFLRNIQRLGEECNIAILLTN 258
>UniRef50_A5DET9 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 504
Score = 50.0 bits (114), Expect = 7e-05
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = -3
Query: 761 HKSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAK--ETHKTVLY 588
H S G+E SLD LN G ITE+ G +G+GK+QL LQ++IN K E+ K+V Y
Sbjct: 88 HVSTGIE----SLDQRLNGGAKVGDITEIFGASGTGKSQLLLQMSINSVKLHESSKSV-Y 142
Query: 587 IDTKGDFSALRIQKI 543
I T+ + R++++
Sbjct: 143 ISTESVIATSRLEEM 157
>UniRef50_A1RYZ3 Cluster: Rad51-like; n=1; Thermofilum pendens Hrk
5|Rep: Rad51-like - Thermofilum pendens (strain Hrk 5)
Length = 315
Score = 50.0 bits (114), Expect = 7e-05
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGD 570
V +LD +L G+ + I E G GSGKTQL Q+++ + V+Y+DT+G
Sbjct: 89 VKALDELLEGGLVTQEIYEFAGEYGSGKTQLCHQLSVTAQLPPSRGGLGGKVVYVDTEGT 148
Query: 569 FSALRIQKILEK 534
FS RI++I E+
Sbjct: 149 FSPSRIERIAER 160
>UniRef50_UPI0000499144 Cluster: DNA repair protein RAD51C; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DNA repair protein
RAD51C - Entamoeba histolytica HM-1:IMSS
Length = 283
Score = 49.6 bits (113), Expect = 9e-05
Identities = 40/180 (22%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKE-----THKTVLYIDTKGDFSA 561
+D LN GI IT++ G GSGK+QL +QIA N + +Y D+ F
Sbjct: 47 IDQFLNGGISLGEITQIVGFPGSGKSQLCMQIACNVQLPEEIGGLNSESIYYDSYSQFCI 106
Query: 560 LRIQKILEKCQYSFKE----VAAIMSRIHISYIWTMEELVNLFKNLKNGEXXXXXXXXXX 393
R+Q++ E S+ E V I+ +IH ++ ++V+L +L +
Sbjct: 107 SRVQRMAECICASYPEYKLNVKEILEKIH---VYQPHDIVSLCSSLLSINNKLNKVKVII 163
Query: 392 XXXLPSLMFQYLGEDNKLGLSLLNSFVNYSRFICKQLNIGIICIN-MQTRWVDQDLTDVE 216
+P+ + + D + L+ L+ + + + ++ +N + T+ ++ + T ++
Sbjct: 164 IDSIPTFYKKAMCNDT-IRLAALHRIIQILSIYSNKYYLSVVIVNHLTTKKINSNYTSID 222
>UniRef50_Q7ZTX4 Cluster: Zgc:56581; n=6; Euteleostomi|Rep:
Zgc:56581 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 373
Score = 49.6 bits (113), Expect = 9e-05
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Frame = -3
Query: 737 SVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI-----NCAKETHKTVLYIDTKG 573
S+ +LD +L+ G+P +TE+ G +G GKTQL + +++ V+YIDT+
Sbjct: 82 SLPALDRLLHGGLPRGALTEVTGPSGCGKTQLCMMLSVLATLPKSLGGLDSGVIYIDTES 141
Query: 572 DFSALRIQKILEKCQYSFKEVAAIMSRI 489
FSA ++++E Q F E ++ R+
Sbjct: 142 AFSA---ERLVEMAQSRFPEFFSVKERL 166
>UniRef50_O50248 Cluster: DNA repair and recombination protein radB;
n=6; Methanococcales|Rep: DNA repair and recombination
protein radB - Methanococcus maripaludis
Length = 216
Score = 49.6 bits (113), Expect = 9e-05
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQK 546
L+ +LN I KTIT++ G G GKT + + I++ A E K V+YIDT+G S RI++
Sbjct: 2 LEELLNGNIEKKTITQIYGPPGVGKTNICI-ISMLKAIENGKNVVYIDTEGSLSIERIKQ 60
Query: 545 ILEK-CQYSFKEV 510
+ K C K +
Sbjct: 61 LSGKDCDELLKNI 73
>UniRef50_O15315 Cluster: DNA repair protein RAD51 homolog 2; n=27;
Deuterostomia|Rep: DNA repair protein RAD51 homolog 2 -
Homo sapiens (Human)
Length = 384
Score = 49.2 bits (112), Expect = 1e-04
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Frame = -3
Query: 737 SVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKG 573
++S+LD L+ G+ ++TE+ G G GKTQ + ++I T+ V+YIDT+
Sbjct: 86 TLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTES 145
Query: 572 DFSALRIQKILEK--CQYSFKEVAAIM--SRIHISYIWTMEELVNLFKNLK 432
FSA R+ +I E +Y E ++ S++H+ T +E++ ++L+
Sbjct: 146 AFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLE 196
>UniRef50_Q2FSR3 Cluster: ATPase; n=4; Methanomicrobiales|Rep:
ATPase - Methanospirillum hungatei (strain JF-1 / DSM
864)
Length = 234
Score = 48.8 bits (111), Expect = 2e-04
Identities = 26/69 (37%), Positives = 43/69 (62%)
Frame = -3
Query: 749 GMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGD 570
G+ ++LD+++ G P K IT++ G GSGK+ L L A++ K+ ++V+Y DT+
Sbjct: 5 GVSSGNAALDDLMGTGYPRKMITQIFGEPGSGKSSLCLMAAVSVLKQ-GESVVYFDTE-S 62
Query: 569 FSALRIQKI 543
FSA R +I
Sbjct: 63 FSAERFSQI 71
>UniRef50_UPI0000586FDE Cluster: PREDICTED: similar to
RAD51L2/RAD51C protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to RAD51L2/RAD51C
protein - Strongylocentrotus purpuratus
Length = 425
Score = 48.4 bits (110), Expect = 2e-04
Identities = 49/175 (28%), Positives = 67/175 (38%), Gaps = 16/175 (9%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAIN-----CAKETHKTVLYIDTKGDFSA 561
LD ML G+P ITE+CG G GKTQ +Q+ ++ +YIDT+G F
Sbjct: 130 LDEMLGGGVPMCKITEICGAPGVGKTQTCIQLCVDVQIPASLGGVEGEAVYIDTEGSFIP 189
Query: 560 LR----IQKILEKC-----QYSFKEVAA--IMSRIHISYIWTMEELVNLFKNLKNGEXXX 414
R Q E C Q K+ I+S IH EL+ L NL
Sbjct: 190 QRAWGIAQAATEHCHTMGDQAELKDFTTEKILSGIHYFRCHNHVELLALV-NLLPEFLSK 248
Query: 413 XXXXXXXXXXLPSLMFQYLGEDNKLGLSLLNSFVNYSRFICKQLNIGIICINMQT 249
+ F++ +D L LLN I Q N+ ++ N T
Sbjct: 249 NPKVKLIIVDSIAFHFRHDFDDMSLRTRLLNGLAQNFIRIATQYNLAVVLTNQMT 303
>UniRef50_UPI0000DB74C1 Cluster: PREDICTED: similar to DNA-repair
protein XRCC3 (X-ray repair cross-complementing protein
3); n=1; Apis mellifera|Rep: PREDICTED: similar to
DNA-repair protein XRCC3 (X-ray repair
cross-complementing protein 3) - Apis mellifera
Length = 169
Score = 48.0 bits (109), Expect = 3e-04
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINC-AKETH----KTVLYIDTKGDF 567
S D +L GI + IT++ G A +GKTQLALQ+ + +T +YI T+ F
Sbjct: 23 SKFDTLLQGGITNRGITQIYGAASTGKTQLALQLCLTVQLPKTEGGLAAGAIYICTESIF 82
Query: 566 SALRIQKILEKCQYSFKEVAAIMSRIHISYIWTMEEL 456
+ R+Q++++K + + K+ + + +I T+EEL
Sbjct: 83 PSRRLQELIQKLEIT-KKHGINGDLVFVEHISTIEEL 118
>UniRef50_Q00XV2 Cluster: RAD51-like protein 2; n=2;
Ostreococcus|Rep: RAD51-like protein 2 - Ostreococcus
tauri
Length = 570
Score = 47.6 bits (108), Expect = 4e-04
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKE-----THKTVLYIDTKGDFS 564
+LD++L+ GI + ITE CG G GKTQ+ Q+ ++ + T +Y+DT+G F
Sbjct: 107 ALDDVLDGGIGSGEITEFCGCPGVGKTQMCTQVCVSASTPEAFGGTDGEAVYVDTEGSFM 166
Query: 563 ALRIQKI 543
A R +
Sbjct: 167 ADRAMDV 173
>UniRef50_Q8TWK1 Cluster: RadA recombinase; n=1; Methanopyrus
kandleri|Rep: RadA recombinase - Methanopyrus kandleri
Length = 316
Score = 47.6 bits (108), Expect = 4e-04
Identities = 33/104 (31%), Positives = 51/104 (49%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALR 555
+ D + G+P I + G G+GK+Q A Q+A + KE ++VLYIDT+ +A R
Sbjct: 93 IQGFDERMGGGLPTGVIVGMYGPPGAGKSQFATQVAAHALKE-GESVLYIDTE---NAFR 148
Query: 554 IQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNLKNGE 423
Q++LE + E+ + R + I L F K GE
Sbjct: 149 PQRLLEIGGFKKDELKEVSDRFVLRRIIDAAALRQYFDE-KEGE 191
>UniRef50_Q55075 Cluster: DNA repair and recombination protein radA;
n=12; Archaea|Rep: DNA repair and recombination protein
radA - Sulfolobus solfataricus
Length = 324
Score = 47.6 bits (108), Expect = 4e-04
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 12/111 (10%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDFS 564
+LD +L GI +T+TE G GSGKTQL Q+++N K +YIDT+G F
Sbjct: 95 ALDGLLAGGIETRTMTEFFGEFGSGKTQLCHQLSVNVQLPPEKGGLSGKAVYIDTEGTFR 154
Query: 563 ALRIQKI-------LEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNLK 432
RI+ + ++ + + AI + I+ + ++ELV+ ++K
Sbjct: 155 WERIENMAKALGLDIDNVMNNIYYIRAINTDHQIAIVDDLQELVSKDPSIK 205
>UniRef50_Q2IEE4 Cluster: Protein recA; n=1; Anaeromyxobacter
dehalogenans 2CP-C|Rep: Protein recA - Anaeromyxobacter
dehalogenans (strain 2CP-C)
Length = 494
Score = 47.2 bits (107), Expect = 5e-04
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDT 579
V LD +L GIPAK+IT + G GSGKT LALQ+ + A++ K LY T
Sbjct: 17 VEGLDQVLGGGIPAKSITVVSGEPGSGKTVLALQMLFHAARQ-GKRSLYFTT 67
Score = 33.9 bits (74), Expect = 4.7
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLY 588
V+ LD + + GIP + T + G G+GKT L L + A+ VL+
Sbjct: 256 VAQLDALFHGGIPPASSTTVMGGTGTGKTLLGLHFLVEGARRGEPGVLF 304
>UniRef50_A4S5M9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 288
Score = 47.2 bits (107), Expect = 5e-04
Identities = 24/62 (38%), Positives = 39/62 (62%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQ 549
++D +L G+ + E+ G + SGKTQL L A + A ++ V+Y+DT G FSA RI+
Sbjct: 47 AIDELLGGGLRQGQLIEITGPSASGKTQLCLSAAASFAALDNR-VVYVDTTGGFSATRIK 105
Query: 548 KI 543
++
Sbjct: 106 QL 107
>UniRef50_UPI00006CB33C Cluster: hypothetical protein
TTHERM_00459230; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00459230 - Tetrahymena
thermophila SB210
Length = 356
Score = 46.8 bits (106), Expect = 6e-04
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETH----KTVLYIDTKGDFSA 561
+LD++LN GI +++ITE G SGKTQ+A + + H VLYIDT+G F
Sbjct: 117 ALDDILNGGIESQSITEFYGEYRSGKTQIAHTACVLAQSQDHCQSPGKVLYIDTEGTFRP 176
Query: 560 LRIQKI 543
RI +I
Sbjct: 177 ERICQI 182
>UniRef50_Q8ZYR9 Cluster: DNA repair and recombination protein radA;
n=19; Archaea|Rep: DNA repair and recombination protein
radA - Pyrobaculum aerophilum
Length = 333
Score = 46.8 bits (106), Expect = 6e-04
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGD 570
V SLD +L GI + +TE+ G GSGKTQL Q+A+ + +YIDT+
Sbjct: 106 VRSLDELLGGGIETRAVTEIVGEFGSGKTQLCHQLAVMVQLPEERGGLGAKAIYIDTENT 165
Query: 569 FSALRIQKI 543
F RI +I
Sbjct: 166 FRPERIMQI 174
>UniRef50_A1CPK9 Cluster: DNA repair protein (Rad57), putative; n=6;
Trichocomaceae|Rep: DNA repair protein (Rad57), putative
- Aspergillus clavatus
Length = 886
Score = 46.4 bits (105), Expect = 8e-04
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQ--LALQIAINC--AKETHKTVLYIDTKGDFSA 561
+LD +LN G+P +TE+ G +GSGKTQ L L +A+ + K +YI T+ +
Sbjct: 449 TLDELLNGGVPVGYLTEVTGESGSGKTQFLLGLLLAVQLPEPRGLGKGAIYISTEAALAT 508
Query: 560 LRIQKILEKCQY 525
R+ ++LE Y
Sbjct: 509 SRLSQLLESHPY 520
>UniRef50_UPI0000D55904 Cluster: PREDICTED: similar to Meiotic
recombination protein DMC1/LIM15 homolog; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to Meiotic
recombination protein DMC1/LIM15 homolog - Tribolium
castaneum
Length = 356
Score = 46.0 bits (104), Expect = 0.001
Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK----TVLYIDTKGDFS 564
++LD +L G+ + +IT++ G AGSGKTQ+A + + T V++IDT+ F
Sbjct: 118 ANLDKLLGGGVESMSITQVFGEAGSGKTQIAHTLCVTTQIPTEDYSGGKVMFIDTERSFR 177
Query: 563 ALRIQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNL 435
RI++I + + E + + + ++I + E + KN+
Sbjct: 178 PNRIRQIARR--FHLSEDSVLQNILYIR-AYNSEHQYQILKNV 217
>UniRef50_A1RY65 Cluster: Rad51-like; n=1; Thermofilum pendens Hrk
5|Rep: Rad51-like - Thermofilum pendens (strain Hrk 5)
Length = 250
Score = 46.0 bits (104), Expect = 0.001
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = -3
Query: 758 KSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLA--LQIAINCAKE---THKTV 594
+S + V SLD++L GI +ITE G G+GKTQ+ L + + K+ +
Sbjct: 26 ESARISTGVRSLDDLLEGGIEVGSITEFIGEFGAGKTQICHQLSVMVQLPKDKGGLNARA 85
Query: 593 LYIDTKGDFSALRIQKI 543
LY+DT+G F RI +I
Sbjct: 86 LYVDTEGTFRPERIVQI 102
>UniRef50_Q6Q241 Cluster: Putative Rad51B protein; n=1;
Chlamydomonas reinhardtii|Rep: Putative Rad51B protein -
Chlamydomonas reinhardtii
Length = 392
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKE-----THKTVLYIDTKGDFS 564
+LD L G+P +ITEL G G GK+QL+ +A+ A V+YIDT+ FS
Sbjct: 89 TLDGALRLGVPVGSITELVGPGGVGKSQLSHMLALAVAMPEALGGLGAGVVYIDTERKFS 148
Query: 563 ALRIQKIL 540
A R+Q+++
Sbjct: 149 APRLQEMV 156
>UniRef50_Q69KV4 Cluster: Trad-like protein; n=3; Oryza sativa|Rep:
Trad-like protein - Oryza sativa subsp. japonica (Rice)
Length = 272
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALR 555
+ +D +L G+ +TE+ G + SGKTQ+ L A + A V+Y+DT FS R
Sbjct: 54 LQGVDALLGGGLRQGQLTEITGQSSSGKTQVCLCSASHVAARQLGVVMYLDTSNSFSPSR 113
Query: 554 IQKILE 537
I +I++
Sbjct: 114 IARIVD 119
>UniRef50_A4S2Y8 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 351
Score = 45.6 bits (103), Expect = 0.001
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETH-----KTVLYIDTKGD 570
+ +D L G+ +TE+ G AG+GKTQL L + A V+Y+D +
Sbjct: 84 IEDVDKALGGGLRVGAVTEVVGAAGAGKTQLCLAACASAAAPARVGGRDGGVIYVDAERK 143
Query: 569 FSALRIQKIL-EKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNL 435
FS R+ +I EK +F++ ++ + ++ T L +L K L
Sbjct: 144 FSGARLAEIAREKFPGAFEDEESVHALARRVHVVTPTSLTDLNKRL 189
>UniRef50_Q5JDP8 Cluster: ATPase, RecA superfamily; n=1;
Thermococcus kodakarensis KOD1|Rep: ATPase, RecA
superfamily - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 448
Score = 45.6 bits (103), Expect = 0.001
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Frame = -3
Query: 746 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDF 567
++ + LD +L G+ +IT + G GSGKT LAL +A N +K + K VLYI +
Sbjct: 238 LKTGILGLDELLGGGLYEGSITLIAGPTGSGKTILALNLASNLSK-SGKKVLYIAYEESL 296
Query: 566 SALRIQKILEK--CQYSFKEVAAI-MSRIHISYIWTMEELV 453
+ALR LEK + +F+ V+ + R + Y +++L+
Sbjct: 297 AALR--DTLEKLGLEENFRIVSMVPEGRTPVEYYALIKDLI 335
Score = 33.9 bits (74), Expect = 4.7
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVL--YIDTKGDF 567
+ SLD LN G + L G GSGKT LA+ + N + K V + +TK F
Sbjct: 8 IPSLDKALNGGFSRGSTILLAGNPGSGKTHLAIHVLYNNMRRGLKGVYVSFAETKKQF 65
>UniRef50_O28184 Cluster: DNA repair and recombination protein radB;
n=1; Archaeoglobus fulgidus|Rep: DNA repair and
recombination protein radB - Archaeoglobus fulgidus
Length = 221
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQK 546
+D++L G+ T+T++ G G+GKT L L +A N A++ V YIDT+G S R+++
Sbjct: 13 IDSLLGGGVETGTVTQIYGHGGTGKTTLCLMLAKNAAEQF--KVAYIDTEG-LSGERVRQ 69
Query: 545 I 543
I
Sbjct: 70 I 70
>UniRef50_Q8PZN5 Cluster: DNA repair and recombination protein radA;
n=21; Archaea|Rep: DNA repair and recombination protein
radA - Methanosarcina mazei (Methanosarcina frisia)
Length = 325
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDF 567
+ D M+ GI + ITEL G GSGKTQ+A Q+A+N + +V+ IDT+ F
Sbjct: 87 TEFDEMMGGGIETQAITELYGEFGSGKTQVAHQLAVNVQMDREHGGLGGSVIIIDTENTF 146
Query: 566 SALRIQKIL 540
RI +++
Sbjct: 147 RPERITQMV 155
>UniRef50_Q1DS44 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 591
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKE----THKTVLYIDTKGDFSAL 558
LD++L+ GI +TE+ G +GSGKTQL L + ++ K LYI T+ D +
Sbjct: 115 LDDVLSGGILTGYVTEIAGESGSGKTQLLLHLLLSVQLPPPYGLRKNALYISTEADLATN 174
Query: 557 RIQKILE 537
R+ ++L+
Sbjct: 175 RLSQLLD 181
>UniRef50_A3LTU6 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 541
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCA--KETHKTVLYIDTKGDFSALR 555
+LD+ L GIP ITE+ G +G GK+ + Q+A+ C + K ++I T+ R
Sbjct: 94 TLDSDLGGGIPTGEITEIFGSSGCGKSHMLAQLAMECQLNEGDCKECIHIGTESFLETKR 153
Query: 554 IQKILEKCQYSFKEVAAIMSRIHISYIWTME 462
+ +I Q S++ + +S +ISYI+ +
Sbjct: 154 LHQI----QQSYESKGSTVSLDNISYIYCQD 180
>UniRef50_Q96449 Cluster: Meiotic recombination protein DMC1
homolog; n=111; Eukaryota|Rep: Meiotic recombination
protein DMC1 homolog - Glycine max (Soybean)
Length = 345
Score = 45.2 bits (102), Expect = 0.002
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDFS 564
+LD +L G+ ITE G SGKTQLA + ++ T+ V YIDT+G F
Sbjct: 115 ALDELLGGGVETSAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFR 174
Query: 563 ALRIQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNL 435
RI I E+ + A++ I + +T E NL L
Sbjct: 175 PDRIVPIAERFG---MDPGAVLDNIIYARAYTYEHQYNLLLGL 214
>UniRef50_Q6CMV0 Cluster: Similar to sp|P25301 Saccharomyces
cerevisiae YDR004w RAD57 DNA repair protein; n=1;
Kluyveromyces lactis|Rep: Similar to sp|P25301
Saccharomyces cerevisiae YDR004w RAD57 DNA repair
protein - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 480
Score = 44.8 bits (101), Expect = 0.003
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVL-----YIDTKGDFSA 561
LD +L GI +K ITE+ G + +GK+QL LQ+A++ L YI T+GD
Sbjct: 96 LDKLLGGGIYSKGITEIFGESSTGKSQLLLQLALSVQLPEDMNGLNGQSVYITTEGDLPT 155
Query: 560 LRIQKILEK 534
R++ I+E+
Sbjct: 156 RRLKSIIEQ 164
>UniRef50_Q8TVF0 Cluster: RadA recombinase; n=1; Methanopyrus
kandleri|Rep: RadA recombinase - Methanopyrus kandleri
Length = 317
Score = 44.8 bits (101), Expect = 0.003
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDF 567
S+LD +L G+P +TE G GSGK+Q+ Q+ +N + ++IDT+G
Sbjct: 82 SALDEILGGGVPCGELTEFAGPFGSGKSQIVFQLCVNVQLPEEEGGLESKAIFIDTEGTV 141
Query: 566 SALRIQKILE 537
S RI+ + E
Sbjct: 142 SPGRIKGMAE 151
>UniRef50_O93748 Cluster: DNA repair and recombination protein radA;
n=2; Thermoprotei|Rep: DNA repair and recombination
protein radA - Cenarchaeum symbiosum
Length = 398
Score = 44.8 bits (101), Expect = 0.003
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Frame = -3
Query: 767 KPHKSVGM-EYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK--- 600
K +S+GM +LD +L GI + ITE+ G GSGKTQ + + K +
Sbjct: 81 KRRQSIGMITTGTDALDALLGGGIETQAITEVFGEFGSGKTQFCHTMCVTTQKPKEEGGL 140
Query: 599 --TVLYIDTKGDFSALRIQKI 543
V+YIDT+G F R+ I
Sbjct: 141 GGGVMYIDTEGTFRPERVVTI 161
>UniRef50_Q6BWA8 Cluster: Similar to sp|P25301 Saccharomyces
cerevisiae YDR004w RAD57 DNA repair protein; n=1;
Debaryomyces hansenii|Rep: Similar to sp|P25301
Saccharomyces cerevisiae YDR004w RAD57 DNA repair
protein - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 569
Score = 44.4 bits (100), Expect = 0.003
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAIN---CAKETHKTVLYIDTKGDFS 564
+ +LD LN GIP ITE+ G +G GK+QL LQ+ I + +YI T+
Sbjct: 101 LEALDRQLNGGIPLGEITEIFGASGCGKSQLLLQLCIYTQLVGDPENNQCIYISTESPLE 160
Query: 563 ALRIQKILEKCQYSFK-EVAAIMSRIHISYIWTME 462
R+ +++ Y+ K + +M I Y +E
Sbjct: 161 TRRLHDMID--HYNAKSDKKVLMDNISCIYCQDIE 193
>UniRef50_A5DYZ1 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 711
Score = 44.0 bits (99), Expect = 0.004
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-TVLYIDTKGDFSALRIQ 549
LD L GIP ++E+ G +G GK+Q QI N + K TV+++ T+ + R++
Sbjct: 208 LDEQLGGGIPIGEVSEVFGASGCGKSQFVYQIIHNSILQGAKNTVVHVATESFMESKRLK 267
Query: 548 KILEKCQYSFKEVAAIMSRIHISYIW 471
I E S +++ + R +SYI+
Sbjct: 268 DIFESDSSSSSSLSSKLDR--MSYIY 291
>UniRef50_A2QR86 Cluster: Remark: alternate names = YDR004W; n=1;
Aspergillus niger|Rep: Remark: alternate names = YDR004W
- Aspergillus niger
Length = 516
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQ----LALQIAINCAKETHKTVLYIDTKGDFSA 561
+LD +L+ GIP +TE+ G +GSGKTQ L L + + K +YI T+ S
Sbjct: 85 TLDALLDGGIPTGYVTEVTGESGSGKTQFLLTLLLAAQLPAPRGLDKCAIYISTEAPLST 144
Query: 560 LRIQKILE 537
R+ +++E
Sbjct: 145 PRLSQLIE 152
>UniRef50_Q6L2I8 Cluster: DNA repair and recombination protein RadB;
n=1; Picrophilus torridus|Rep: DNA repair and
recombination protein RadB - Picrophilus torridus
Length = 228
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = -3
Query: 737 SVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSAL 558
+V +D ++N G+ ITE+ G GSGKT +++ I + K V+YIDT+G FS
Sbjct: 16 NVKCIDELMNGGLEPGIITEIYGQGGSGKTNISM-IFARSVLLSGKRVIYIDTEG-FSTE 73
Query: 557 RIQKI 543
R +I
Sbjct: 74 RFSQI 78
>UniRef50_Q9HPF2 Cluster: DNA repair and recombination protein radB;
n=5; Halobacteriaceae|Rep: DNA repair and recombination
protein radB - Halobacterium salinarium (Halobacterium
halobium)
Length = 236
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQ 549
+LD +L G+ T+T+L G +GKT +AL A+ A V Y+DT+G S R Q
Sbjct: 14 ALDELLGGGVERGTVTQLYGPPAAGKTNVALTTAVTTAAAGGLAV-YVDTEG-LSLARFQ 71
Query: 548 KILE 537
++LE
Sbjct: 72 QLLE 75
>UniRef50_Q1ZXF0 Cluster: Putative DNA repair protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative DNA repair
protein - Dictyostelium discoideum AX4
Length = 354
Score = 43.6 bits (98), Expect = 0.006
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = -3
Query: 767 KPHKSVGMEYSVSSLDNMLN-RGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVL 591
K H S G++ LD +L G + I EL G GKTQ+++ ++N +++ + ++
Sbjct: 86 KTHYSSGIKL----LDQLLGGNGFTSGEIYELVGNTSCGKTQISMCCSLNLSQQYNSNII 141
Query: 590 YIDTKGDFSALRIQKILEKCQYSFKE 513
YID+ FS R+ +I K Y K+
Sbjct: 142 YIDSSNSFSPPRLIEIF-KSNYLIKQ 166
>UniRef50_Q5A2U1 Cluster: Putative uncharacterized protein RAD57;
n=1; Candida albicans|Rep: Putative uncharacterized
protein RAD57 - Candida albicans (Yeast)
Length = 511
Score = 43.6 bits (98), Expect = 0.006
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKE--THKTVLYIDTKGDFSALR 555
S+D L GIP +TE+ G +G GK+ Q+ NC KE T K + YI T+ R
Sbjct: 91 SIDRELGGGIPIGEVTEIFGASGCGKSHFLFQLLSNCGKEFSTSKNI-YISTESFLETKR 149
Query: 554 IQKIL 540
++ +
Sbjct: 150 LKDFI 154
>UniRef50_Q55WG1 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 324
Score = 43.6 bits (98), Expect = 0.006
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = -3
Query: 740 YSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVL-YIDTKGDFS 564
+ V LD +L+ G + E+ G GK+ LAL A+N + + + ++DT+G F+
Sbjct: 85 FGVKGLDELLD-GWEGVGVLEIAGPRKVGKSLLALHAALNVLIDNPEAICTWMDTEGTFA 143
Query: 563 ALRIQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNLKNGE 423
R K+LE + + +++SRI + + ++++ LK +
Sbjct: 144 PERAGKVLE--AWKIENATSVLSRIMVVPCFKLDDMYETLGRLKEAD 188
>UniRef50_Q2USE9 Cluster: Predicted protein; n=6;
Trichocomaceae|Rep: Predicted protein - Aspergillus
oryzae
Length = 375
Score = 43.6 bits (98), Expect = 0.006
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = -3
Query: 710 NRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQKILEK 534
+ GIP +TE+ G G+GKT LAL +A + + K V++IDT +R+ +L+K
Sbjct: 65 SNGIPCGHVTEVYGPPGAGKTSLALSVATSALRNGDK-VIWIDTGSPLPKVRLASMLKK 122
>UniRef50_UPI000065EE6A Cluster: DNA-repair protein XRCC3 (X-ray
repair cross-complementing protein 3).; n=1; Takifugu
rubripes|Rep: DNA-repair protein XRCC3 (X-ray repair
cross-complementing protein 3). - Takifugu rubripes
Length = 346
Score = 43.2 bits (97), Expect = 0.008
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKET-----HKTVLYIDTKGDFSA 561
++ +L G+P ITEL G +G+GKTQLALQ+ + T +YI T+ F
Sbjct: 89 INELLRGGLPVGRITELSGQSGAGKTQLALQLCLCVQYPTDYGGLDSGAVYICTENSFPI 148
Query: 560 LRIQKIL 540
R+Q+++
Sbjct: 149 RRLQQLV 155
>UniRef50_Q01C18 Cluster: Rad51B protein; n=2; Ostreococcus|Rep:
Rad51B protein - Ostreococcus tauri
Length = 618
Score = 43.2 bits (97), Expect = 0.008
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKG 573
++D L G+ + ITE+CG +G+GKT L Q+A+ + + +Y+ T+G
Sbjct: 341 AIDAALRGGVRTRQITEVCGESGTGKTHLCAQLALFAQLDLGGSTVYVHTEG 392
>UniRef50_Q4N299 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 286
Score = 42.7 bits (96), Expect = 0.010
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = -3
Query: 740 YSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI-----NCAKETHKTVLYIDTK 576
+ V +D LN G+ + E+ G +GSGKTQ AL + N VLYI T
Sbjct: 30 FGVKEIDQALNGGLLLGKVCEIYGPSGSGKTQFALSLTSEVLINNLIHSKDYVVLYIYTN 89
Query: 575 GDFSALRIQKIL 540
G F R+ +IL
Sbjct: 90 GTFPIERLNEIL 101
>UniRef50_UPI0000E47207 Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 355
Score = 42.3 bits (95), Expect = 0.013
Identities = 40/182 (21%), Positives = 74/182 (40%), Gaps = 10/182 (5%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDFSA 561
LD L+ GI K ITE+ G + +GKTQL LQ+ + + V+YI T+ F +
Sbjct: 88 LDEFLHGGILVKGITEIAGQSAAGKTQLCLQLCLTAQLPVQQGGLANGVVYICTEDVFPS 147
Query: 560 LRIQKIL----EKCQYSFKEVAAIMSRIHISYIWTMEELVN-LFKNLKNGEXXXXXXXXX 396
R+Q+++ + + + A+ I++ + ++L + L K L
Sbjct: 148 KRLQQLISSFNRRIGPALAKQLAVGDHIYVEHAAEKDQLWHCLEKRLPLLLSRGMVKLAV 207
Query: 395 XXXXLPSLMFQYLGEDNKLGLSLLNSFVNYSRFICKQLNIGIICINMQTRWVDQDLTDVE 216
++ D L + + Q N+ ++C+N T ++ L E
Sbjct: 208 VDSLAAIFRSEFELRDTIRRARELQRVGAHLHRLSSQFNVAVVCVNQVTANMEASLDPTE 267
Query: 215 DE 210
E
Sbjct: 268 SE 269
>UniRef50_Q49593 Cluster: DNA repair and recombination protein radA;
n=11; Archaea|Rep: DNA repair and recombination protein
radA - Methanococcus jannaschii
Length = 352
Score = 42.3 bits (95), Expect = 0.013
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 21/120 (17%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAIN--CAKE------------THKTVL 591
+LD +L G+ ++++TE G+ GSGKTQ+A Q +N C + +
Sbjct: 117 NLDEILGGGLESQSVTEFAGMFGSGKTQIAHQACVNLQCPERIVADDAIKDEILNEPKAV 176
Query: 590 YIDTKGDFSALRIQKILEKCQYSFKEV-------AAIMSRIHISYIWTMEELVNLFKNLK 432
YIDT+G F RI ++ E EV A S + + Y +E L+ N+K
Sbjct: 177 YIDTEGTFRPERIVQMAEALGLDGNEVLNNIFVARAYNSDMQMLYAENVENLIREGHNIK 236
>UniRef50_Q9HMM4 Cluster: DNA repair and recombination protein radA;
n=160; Halobacteriaceae|Rep: DNA repair and
recombination protein radA - Halobacterium salinarium
(Halobacterium halobium)
Length = 343
Score = 42.3 bits (95), Expect = 0.013
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Frame = -3
Query: 746 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKET-----HKTVLYID 582
+ +++ +D++L G+ ++ITE+ G G+GK+Q+ Q+A+N T H ++ID
Sbjct: 82 LTWNIPEVDDLLGGGVETQSITEVYGEFGAGKSQVTHQLAVNVQLPTEYGGLHGRAVFID 141
Query: 581 TKGDFSALRIQKIL 540
++ F RI ++
Sbjct: 142 SEDTFRPERIDDMV 155
>UniRef50_Q06609 Cluster: DNA repair protein RAD51 homolog 1; n=22;
Eukaryota|Rep: DNA repair protein RAD51 homolog 1 - Homo
sapiens (Human)
Length = 339
Score = 42.3 bits (95), Expect = 0.013
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDFSA 561
LD +L GI +ITE+ G +GKTQ+ +A+ C + +YIDT+G F
Sbjct: 109 LDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRP 168
Query: 560 LRIQKILEKCQYSFKEV 510
R+ + E+ S +V
Sbjct: 169 ERLLAVAERYGLSGSDV 185
>UniRef50_Q6YU07 Cluster: Putative XRCC3; n=2; Oryza sativa|Rep:
Putative XRCC3 - Oryza sativa subsp. japonica (Rice)
Length = 290
Score = 41.9 bits (94), Expect = 0.018
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI 624
LD +L+ G+P ++TE+ G + SGKTQL LQ+A+
Sbjct: 50 LDRLLSGGLPPASVTEIAGESASGKTQLCLQLAL 83
>UniRef50_A2ZKR2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 294
Score = 41.9 bits (94), Expect = 0.018
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDFSA 561
LD +L+ GI +ITE+ G SGKTQL + + C + LYID +G F
Sbjct: 103 LDKILDGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYIDAEGTFRP 162
Query: 560 LRIQKILEKCQYSFKEVAAIMSRIHIS 480
R+ +I ++ + A + R S
Sbjct: 163 QRLLQIADRFAIMIVDSATALYRTDFS 189
>UniRef50_Q9PR61 Cluster: Protein recA; n=1; Ureaplasma parvum|Rep:
Protein recA - Ureaplasma parvum (Ureaplasma urealyticum
biotype 1)
Length = 334
Score = 41.5 bits (93), Expect = 0.024
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = -3
Query: 704 GIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDF 567
GIP ITE+ G SGKT +ALQ C K T TV+ +D +G F
Sbjct: 54 GIPVGKITEIYGNESSGKTTIALQTIAECQK-TGGTVVLLDLEGSF 98
>UniRef50_P25454 Cluster: DNA repair protein RAD51; n=111;
Eukaryota|Rep: DNA repair protein RAD51 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 400
Score = 41.5 bits (93), Expect = 0.024
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKET-----HKTVLYIDTKGDFS 564
+LD +L G+ +ITEL G +GK+QL +A+ C LYIDT+G F
Sbjct: 166 NLDTLLGGGVETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFR 225
Query: 563 ALRIQKILEK 534
+R+ I ++
Sbjct: 226 PVRLVSIAQR 235
>UniRef50_Q0D0U2 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 743
Score = 41.1 bits (92), Expect = 0.031
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQ----LALQIAINCAKETHKTVLYIDTKGDFSA 561
+LD +L+ GIP +TE+ G + SGKTQ L L + + +K +YI T+ +
Sbjct: 292 ALDALLHGGIPTGYLTEVTGESASGKTQFLLTLLLAAQLPAPRGLNKRAIYISTEAPIAT 351
Query: 560 LRIQKILE 537
R+ ++LE
Sbjct: 352 SRLTQMLE 359
>UniRef50_O43542 Cluster: DNA-repair protein XRCC3; n=19;
Euteleostomi|Rep: DNA-repair protein XRCC3 - Homo
sapiens (Human)
Length = 346
Score = 41.1 bits (92), Expect = 0.031
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQ--IAINCAKE---THKTVLYIDTKGDFSA 561
LD +L G+P ITEL G + +GKTQLALQ +A+ ++ +YI T+ F
Sbjct: 89 LDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYICTEDAFPH 148
Query: 560 LRIQKIL 540
R+Q+++
Sbjct: 149 KRLQQLM 155
>UniRef50_Q9UUL2 Cluster: DNA repair protein rhp57; n=1;
Schizosaccharomyces pombe|Rep: DNA repair protein rhp57
- Schizosaccharomyces pombe (Fission yeast)
Length = 354
Score = 41.1 bits (92), Expect = 0.031
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKE-----THKTVLYIDTKGDFSA 561
LD L+ GIP +TE+CG +GSGK+Q +Q+ + +K ++I T+ S
Sbjct: 82 LDETLHGGIPVGQLTEICGESGSGKSQFCMQLCLMVQLPLSLGGMNKAAVFISTE---SG 138
Query: 560 LRIQKILEKCQY 525
L +++ E +Y
Sbjct: 139 LETKRLFELARY 150
>UniRef50_Q27297 Cluster: DNA repair protein Rad51 homolog; n=12;
Fungi/Metazoa group|Rep: DNA repair protein Rad51
homolog - Drosophila melanogaster (Fruit fly)
Length = 336
Score = 41.1 bits (92), Expect = 0.031
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINC-----AKETHKTVLYIDTKGDFSA 561
LD +L GI +ITE+ G GKTQL +A+ C K +YIDT+ F
Sbjct: 106 LDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRP 165
Query: 560 LRIQKILEKCQYSFKEV 510
R+ I ++ + + EV
Sbjct: 166 ERLAAIAQRYKLNESEV 182
>UniRef50_Q9SK02 Cluster: DNA repair protein RAD51 homolog 2; n=6;
Magnoliophyta|Rep: DNA repair protein RAD51 homolog 2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 370
Score = 41.1 bits (92), Expect = 0.031
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = -3
Query: 761 HKSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKET-----HKT 597
H S + + LD+ L GIP +TEL G G GK+Q +++A++ +
Sbjct: 79 HLSGHLPTHLKGLDDTLCGGIPFGVLTELVGPPGIGKSQFCMKLALSASFPVAYGGLDGR 138
Query: 596 VLYIDTKGDFSALRIQKILEKCQYSFKEV 510
V+YID + FS+ ++++E SF EV
Sbjct: 139 VIYIDVESKFSS---RRVIEMGLESFPEV 164
>UniRef50_A4XGH9 Cluster: RecA-superfamily ATPase implicated in
signal transduction-like protein; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
RecA-superfamily ATPase implicated in signal
transduction-like protein - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 214
Score = 40.7 bits (91), Expect = 0.041
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -3
Query: 740 YSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVL 591
+ + LD MLN G+P TIT + G G+GKT AL+ + A+ K +L
Sbjct: 143 FGIRDLDEMLNGGLPEGTITIISGGTGTGKTTFALKFLLEGAEIGEKGLL 192
>UniRef50_Q8SZ30 Cluster: RE19845p; n=2; Sophophora|Rep: RE19845p -
Drosophila melanogaster (Fruit fly)
Length = 270
Score = 40.7 bits (91), Expect = 0.041
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAIN-----CAKETHKTVLYIDTKGDFS 564
+LD GI + EL G +G+GKTQ+ LQ+ +N A + L+IDT+ DF
Sbjct: 52 ALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFIDTRQDFH 111
Query: 563 ALRIQKILEKCQYSF 519
R+ + K + +
Sbjct: 112 PDRLMGLALKLERQY 126
>UniRef50_A2DYQ0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 288
Score = 40.7 bits (91), Expect = 0.041
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = -3
Query: 686 ITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKG 573
+TE+CGI GSG+T L L+ A + TH T L+IDT+G
Sbjct: 107 VTEICGIPGSGRTSLCLRYA-DSISNTHST-LWIDTEG 142
>UniRef50_Q8ZTI5 Cluster: DNA repair protein radA; n=5;
Pyrobaculum|Rep: DNA repair protein radA - Pyrobaculum
aerophilum
Length = 311
Score = 40.7 bits (91), Expect = 0.041
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = -3
Query: 707 RGIPAKTITELCGIAGSGKTQLALQIAINCAKETH-KTVLYIDTKGDFSALRIQKILEKC 531
RGI I E G G+GK+ LA Q ++ +E + V+YIDT+G F+ I+ + +
Sbjct: 95 RGIREAFIYEFAGEFGAGKSMLAHQASVAALREGFTERVVYIDTEGTFNEALIEAVARRF 154
Query: 530 QYSFKEVAAIMSRIHISYIWTMEELV 453
+ + +A + + + +E++V
Sbjct: 155 ELDVERIADSIYVYQPANVVQLEQIV 180
>UniRef50_Q9P6E6 Cluster: Related to RAD57 protein; n=2; Neurospora
crassa|Rep: Related to RAD57 protein - Neurospora crassa
Length = 510
Score = 40.3 bits (90), Expect = 0.054
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINC-AKETH---KTVLYIDTKGDFSAL 558
+D L GIPA +TE+ G +G+GKTQ L + ++ H + LYI T+ S
Sbjct: 114 IDRALGGGIPAGYVTEITGESGAGKTQFLLTLLLSVQLPPPHGLGRPALYISTEAPLSTR 173
Query: 557 RIQKIL 540
R+ ++L
Sbjct: 174 RLAQML 179
>UniRef50_Q2GW05 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 476
Score = 40.3 bits (90), Expect = 0.054
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINC-AKETH---KTVLYIDTKGDFSAL 558
LD L GIPA +TE+ G +G+GKTQ L + + H + LYI T+ S
Sbjct: 134 LDRALGGGIPAGYVTEVTGESGAGKTQFLLSLLLAAQLPPPHGLSRPALYISTEAPLSTR 193
Query: 557 RIQKIL 540
R+ ++L
Sbjct: 194 RLAQML 199
>UniRef50_Q18FI4 Cluster: DNA repair and recombination protein RadB;
n=2; Halobacteriaceae|Rep: DNA repair and recombination
protein RadB - Haloquadratum walsbyi (strain DSM 16790)
Length = 257
Score = 40.3 bits (90), Expect = 0.054
Identities = 22/64 (34%), Positives = 38/64 (59%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQ 549
SLD++L G T+T++ G +GKT + L A++ A T +Y+DT+G S+ R +
Sbjct: 11 SLDSLLGGGFERGTVTQVYGPPAAGKTNIMLSAALHTA-ATDSMAVYVDTEG-ISSDRFR 68
Query: 548 KILE 537
+I +
Sbjct: 69 QIAD 72
>UniRef50_Q9HJD3 Cluster: DNA repair and recombination protein radB;
n=5; Thermoplasmatales|Rep: DNA repair and recombination
protein radB - Thermoplasma acidophilum
Length = 229
Score = 40.3 bits (90), Expect = 0.054
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = -3
Query: 746 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKG 573
++ V +D +LN G+ ITE+ G GSGKT + + IA A V+YID++G
Sbjct: 13 IQTGVGCIDALLNGGLEGGIITEIFGEGGSGKTNICM-IASCSAMSQGLKVIYIDSEG 69
>UniRef50_Q9V2F6 Cluster: DNA repair and recombination protein radB;
n=5; Thermococcaceae|Rep: DNA repair and recombination
protein radB - Pyrococcus abyssi
Length = 239
Score = 40.3 bits (90), Expect = 0.054
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = -3
Query: 758 KSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDT 579
K + + V LD +L G+ I ++ G +GKT A+Q+ + V Y+DT
Sbjct: 9 KGMTLTTGVKGLDELLGGGVARGVILQVYGPFATGKTTFAMQVGLL----NEGKVAYVDT 64
Query: 578 KGDFSALRIQKILE 537
+G FS R++++ E
Sbjct: 65 EGGFSPERLKQMAE 78
>UniRef50_Q99131 Cluster: REC2 protein; n=1; Ustilago maydis|Rep:
REC2 protein - Ustilago maydis (Smut fungus)
Length = 781
Score = 39.9 bits (89), Expect = 0.072
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCA 615
LD++L G+ + +TEL G +GSGKTQ+A+Q+ A
Sbjct: 233 LDDLLGGGVRSAVLTELVGESGSGKTQMAIQVCTYAA 269
>UniRef50_A7D6F3 Cluster: KaiC domain protein; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: KaiC domain protein -
Halorubrum lacusprofundi ATCC 49239
Length = 513
Score = 39.9 bits (89), Expect = 0.072
Identities = 30/105 (28%), Positives = 55/105 (52%)
Frame = -3
Query: 743 EYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFS 564
+ + LD M+ G+P +++ + G AG+GKT ALQ +N A E+ + +YI +
Sbjct: 287 DIGIEGLDEMILGGVPRRSLLSVIGGAGTGKTTFALQF-LNEALESDRKGVYITLEQTRE 345
Query: 563 ALRIQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNLKN 429
+ I E+ +SF+E A R+ + I + E+ N +++N
Sbjct: 346 S--ILSTAEEKGWSFREHAE-ADRLAVVAIDPI-EMANSLASIRN 386
>UniRef50_A6QWV8 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 587
Score = 39.5 bits (88), Expect = 0.095
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKE----THKTVLYIDTKGDFSAL 558
LD +L GI +TEL G +G GKTQ L + ++ T + LY+ T+ +
Sbjct: 118 LDRVLAGGISTGYVTELAGESGCGKTQFLLHLLLSVQLPPPYGTSQKALYLSTESNLPTN 177
Query: 557 RIQKILEK 534
R+ ++LE+
Sbjct: 178 RLSQLLEE 185
>UniRef50_Q9SX38 Cluster: Putative disease resistance protein
At1g50180; n=2; Arabidopsis thaliana|Rep: Putative
disease resistance protein At1g50180 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 839
Score = 39.5 bits (88), Expect = 0.095
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = -3
Query: 761 HKSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQI 630
H VG+E S+ L N L G +T +CG+ G GKT LA QI
Sbjct: 162 HNLVGLEQSLEKLVNDLVSGGEKLRVTSICGMGGLGKTTLAKQI 205
>UniRef50_Q657A2 Cluster: DNA repair protein radA (RadA)-like; n=3;
Oryza sativa|Rep: DNA repair protein radA (RadA)-like -
Oryza sativa subsp. japonica (Rice)
Length = 309
Score = 39.1 bits (87), Expect = 0.13
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = -3
Query: 671 GIAGSGKTQLALQIAINCAKETH-----KTVLYIDTKGDFSALRIQKILEKC 531
G+ G GKTQL +Q+AIN +YIDT+G F R+ +I E C
Sbjct: 75 GVPGVGKTQLGIQLAINVQIPVEYGGLGGKAVYIDTEGSFMVERVYQIAEGC 126
>UniRef50_A6RPX0 Cluster: Putative uncharacterized protein; n=2;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 485
Score = 39.1 bits (87), Expect = 0.13
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINC-AKETH---KTVLYIDTKGDFSAL 558
+D L GIPA ITE+ G +G+GKTQ L + ++ H LYI T+
Sbjct: 116 MDRALGGGIPAGYITEVTGESGAGKTQFLLTLLLSAQLPAPHGLASPTLYISTESSLPIT 175
Query: 557 RIQKIL 540
R+ ++L
Sbjct: 176 RLSQLL 181
>UniRef50_Q12V32 Cluster: KaiC; n=1; Methanococcoides burtonii DSM
6242|Rep: KaiC - Methanococcoides burtonii (strain DSM
6242)
Length = 454
Score = 39.1 bits (87), Expect = 0.13
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = -3
Query: 746 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDF 567
M + +LD +L G P + + G AGSGKT LA+Q +I A E + +Y+ + +
Sbjct: 4 MSSEIDALDTILKGGFPKPSAILIAGPAGSGKTTLAMQ-SIFSASEKKEVCMYVTSLNE- 61
Query: 566 SALRIQKILEKCQY 525
+ K + K +
Sbjct: 62 PITMVNKFMSKLNF 75
Score = 33.9 bits (74), Expect = 4.7
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -3
Query: 764 PHKSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAK--ETHKTVL 591
PH + + + LD M G+ T T + G +G+GKT + Q AK E V
Sbjct: 230 PHFTDRVSTGIEGLDIMTGNGVIRGTSTLISGCSGAGKTTIGTQFIAEGAKAEEPGMIVS 289
Query: 590 YIDTKG 573
+I+++G
Sbjct: 290 FIESEG 295
>UniRef50_UPI000023E7C1 Cluster: hypothetical protein FG00844.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00844.1 - Gibberella zeae PH-1
Length = 445
Score = 38.7 bits (86), Expect = 0.17
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQ----LALQIAINCAKETHKTVLYIDTKGDFSAL 558
LD +L G+P +TE G +G+GKTQ L L + + + LYI T+ +
Sbjct: 96 LDAILGGGVPVGAVTEFTGESGAGKTQALLSLCLAVQLPSPHGLGREALYISTEATMATS 155
Query: 557 RIQKILE 537
R+ ++L+
Sbjct: 156 RLAQMLK 162
>UniRef50_Q02AB2 Cluster: RecA domain protein; n=1; Solibacter
usitatus Ellin6076|Rep: RecA domain protein - Solibacter
usitatus (strain Ellin6076)
Length = 248
Score = 38.7 bits (86), Expect = 0.17
Identities = 24/71 (33%), Positives = 33/71 (46%)
Frame = -3
Query: 773 P*KPHKSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTV 594
P P + +LD L G+P + E G +G GKT LA+QIA + A+ T
Sbjct: 19 PHSPARDTCFSSGFQALDEALGGGLPRGQMVEFYGPSGCGKTTLAIQIAAH-AQAGGLTC 77
Query: 593 LYIDTKGDFSA 561
+ID F A
Sbjct: 78 AWIDADRTFDA 88
>UniRef50_Q8I9U4 Cluster: Recombinase Rad51; n=7; Aconoidasida|Rep:
Recombinase Rad51 - Plasmodium falciparum
Length = 350
Score = 38.7 bits (86), Expect = 0.17
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKT-----VLYIDTKGDFSA 561
LD +L GI ITEL G +GK+QL +AI C ++ L+IDT+G F
Sbjct: 119 LDALLKGGIETGGITELFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLWIDTEGTFRP 178
Query: 560 LRIQKILEK 534
RI I ++
Sbjct: 179 ERIVAIAKR 187
>UniRef50_A7ATP8 Cluster: Rad51 protein, putative; n=1; Babesia
bovis|Rep: Rad51 protein, putative - Babesia bovis
Length = 346
Score = 38.7 bits (86), Expect = 0.17
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKT-----VLYIDTKGDF 567
++LD +L GI + +ITE+ G +GKTQL +AI + L+IDT+ F
Sbjct: 110 TALDALLQGGIESGSITEIIGDFSTGKTQLCHTLAITSQLPIEQNGGEGKCLWIDTQNSF 169
Query: 566 SALRIQKILEKCQYSFKEVAAIMSRIHIS 480
R+ I + S E A + + +S
Sbjct: 170 RPERLGPIANRFGLSHAECVANIVYVKVS 198
>UniRef50_Q30L73 Cluster: Gp72; n=1; Listeria phage P100|Rep: Gp72 -
Listeria phage P100
Length = 414
Score = 38.3 bits (85), Expect = 0.22
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALR 555
+ LD +L GIP +TE+ G SGK+ LA+ + A + V++IDT+G R
Sbjct: 42 IPQLDYILGGGIPFGRLTEIMGKNASGKSTLAVHLT-KVALQLDCKVIWIDTEGTADPSR 100
Query: 554 IQKI 543
+ ++
Sbjct: 101 LSQL 104
>UniRef50_Q1DNF7 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 436
Score = 38.3 bits (85), Expect = 0.22
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = -3
Query: 704 GIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQKIL 540
G+ +TEL G SGKT LA+ +A + + ++V+++DT G R++ +L
Sbjct: 84 GVQRGEVTELVGPRASGKTVLAMSLAAEVLR-SQRSVVWVDTAGPMCVSRLESLL 137
>UniRef50_A7E7I5 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 493
Score = 38.3 bits (85), Expect = 0.22
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKET----HKTVLYIDTKGDFSAL 558
+D L GIP ITE+ G +G+GKTQ L + ++ LYI T+
Sbjct: 116 MDRALGGGIPTGYITEITGESGAGKTQFLLTLLLSAQLPAPYGLTAPTLYISTESSLPTT 175
Query: 557 RIQKIL 540
R+ +IL
Sbjct: 176 RLSQIL 181
>UniRef50_Q2Y4W8 Cluster: Putative uncharacterized protein C5_0035;
n=2; environmental samples|Rep: Putative uncharacterized
protein C5_0035 - uncultured archaeon
Length = 241
Score = 38.3 bits (85), Expect = 0.22
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALR 555
+ LD L GIP +I+ +CG+AG K+ A I N A LYI + +L+
Sbjct: 14 IERLDEQLEGGIPKGSISLICGVAGCMKSSFAYSILYNNAVVGDLKGLYITLEQAVPSLK 73
Query: 554 IQ-KILEKCQYSFK 516
Q K LE + S K
Sbjct: 74 QQMKTLEMVEESDK 87
>UniRef50_O14129 Cluster: DNA repair protein rhp55; n=1;
Schizosaccharomyces pombe|Rep: DNA repair protein rhp55
- Schizosaccharomyces pombe (Fission yeast)
Length = 350
Score = 38.3 bits (85), Expect = 0.22
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = -3
Query: 749 GMEYSVSSLDNMLN-RGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKG 573
G ++ LD+ G+ I+E+CG G GKT LALQI N A + V++++T
Sbjct: 24 GFGFNSKLLDDAFGGSGLKRGYISEVCGAPGMGKTSLALQITAN-ALLSGSRVIWVETCQ 82
Query: 572 DFSALRIQKILE 537
R++++L+
Sbjct: 83 PIPMERLRQLLD 94
>UniRef50_Q189H2 Cluster: Putative phage-related replicative
helicase; n=1; Clostridium difficile 630|Rep: Putative
phage-related replicative helicase - Clostridium
difficile (strain 630)
Length = 433
Score = 37.9 bits (84), Expect = 0.29
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = -3
Query: 758 KSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTV 594
K +G ++ + LD + G+ +T + +G GKT LALQI +N K+ KT+
Sbjct: 163 KDIGFKFGIKLLDTTIG-GLFKGELTTIAAKSGVGKTALALQIMLNSFKQGKKTL 216
>UniRef50_Q7RD33 Cluster: DNA repair protein rhp51; n=1; Plasmodium
yoelii yoelii|Rep: DNA repair protein rhp51 - Plasmodium
yoelii yoelii
Length = 365
Score = 37.9 bits (84), Expect = 0.29
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINC-----AKETHKTVLYIDTKGDF 567
S LD L G + +ITEL G GKTQ+ +A+ + + V YIDT+G F
Sbjct: 114 SVLDKTLGGGFESMSITELFGENRCGKTQVCHTLAVTAQLPKSMQGGNGKVCYIDTEGTF 173
Query: 566 SALRIQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNL 447
+I KI ++ + ++V + I + +T E L L
Sbjct: 174 RPEKICKIAQRFGLNSEDV---LDNILYARAFTHEHLYQL 210
>UniRef50_O61128 Cluster: Dmc1 homolog; n=11; Eukaryota|Rep: Dmc1
homolog - Leishmania major
Length = 364
Score = 37.9 bits (84), Expect = 0.29
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Frame = -3
Query: 731 SSLDNMLNRG-IPAKTITELCGIAGSGKTQLALQIAINCAKET-----HKTVLYIDTKGD 570
++LD +L G I +++ITE G +GKTQ+ + + C + +Y+DT+G
Sbjct: 131 TALDQLLGGGGIESRSITEAFGEFRTGKTQIGHTLCVTCQLPLEMGGGNGKAVYVDTEGT 190
Query: 569 FSALRIQKILEK 534
F RI+ I E+
Sbjct: 191 FRPERIRPIAER 202
>UniRef50_Q0W7M8 Cluster: Putative uncharacterized protein; n=1;
uncultured methanogenic archaeon RC-I|Rep: Putative
uncharacterized protein - Uncultured methanogenic
archaeon RC-I
Length = 231
Score = 37.9 bits (84), Expect = 0.29
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTV 594
V LD +L G P K + + G G+GK+ LALQ +N K K+V
Sbjct: 8 VQGLDELLQGGFPEKHMIVVVGGMGTGKSTLALQFLVNGLKNGEKSV 54
>UniRef50_P25301 Cluster: DNA repair protein RAD57; n=2;
Saccharomyces cerevisiae|Rep: DNA repair protein RAD57 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 460
Score = 37.9 bits (84), Expect = 0.29
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINC-----AKETHKTVLYIDTKGDFS 564
++D +L GI ITE+ G + +GK+QL +Q+A++ A +YI T+GD
Sbjct: 106 AMDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYITTEGDLP 165
Query: 563 ALRIQKIL 540
R++ +L
Sbjct: 166 TQRLESML 173
>UniRef50_P25453 Cluster: Meiotic recombination protein DMC1; n=39;
Eukaryota|Rep: Meiotic recombination protein DMC1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 334
Score = 37.9 bits (84), Expect = 0.29
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLA--LQIAINCAKET---HKTVLYIDTKGDFSA 561
LD++L GI +ITE+ G GKTQ++ L + +E V YIDT+G F
Sbjct: 103 LDSILGGGIMTMSITEVFGEFRCGKTQMSHTLCVTTQLPREMGGGEGKVAYIDTEGTFRP 162
Query: 560 LRIQKILE 537
RI++I E
Sbjct: 163 ERIKQIAE 170
>UniRef50_Q3ADP9 Cluster: Conserved domain protein; n=1;
Carboxydothermus hydrogenoformans Z-2901|Rep: Conserved
domain protein - Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008)
Length = 296
Score = 37.5 bits (83), Expect = 0.38
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = -3
Query: 758 KSVGME----YSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK 600
K +G+E + + LDN+L GI + T L G G+GKT +L+ A+ A+ K
Sbjct: 236 KGLGLEVRDNFGIEGLDNLLGGGIYRGSSTLLAGATGTGKTLFSLKFALEAAQRGEK 292
Score = 35.5 bits (78), Expect = 1.5
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDT 579
+ + D +L GIP +I + G GSGKT L I N A+ K+ LY T
Sbjct: 8 IENFDEVLGGGIPLYSINIIAGNPGSGKTILVQNILFNAARRGLKS-LYFTT 58
>UniRef50_Q54QU4 Cluster: AAA ATPase domain-containing protein; n=1;
Dictyostelium discoideum AX4|Rep: AAA ATPase
domain-containing protein - Dictyostelium discoideum AX4
Length = 564
Score = 37.5 bits (83), Expect = 0.38
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = -3
Query: 755 SVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKE-----THKTVL 591
S+ + +D L GI ITE+ G +GSGKTQL +Q+++ + L
Sbjct: 164 SIKLSTGCKIMDKCLGGGISPIGITEIAGESGSGKTQLCIQLSLQVQLPFEMGGLNGACL 223
Query: 590 YIDTKGDFSALRIQKI 543
YI T+ F R+ ++
Sbjct: 224 YITTEPPFPTKRLNQM 239
>UniRef50_A0DFA4 Cluster: Chromosome undetermined scaffold_49, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_49,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 256
Score = 37.5 bits (83), Expect = 0.38
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = -3
Query: 794 EQQWHHIP*KPHKSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCA 615
E ++ H+ P ++Y++S +++ GI +TEL G AG GKT + + + IN
Sbjct: 10 ESKFEHLSIIPIFDEILKYTLS----LISGGIQTGILTELYGEAGCGKTHVCMTLMINTI 65
Query: 614 KETHKT--VLYIDTKGDFSALRIQKILEKCQY 525
+KT V+YI T R ++L K Y
Sbjct: 66 -INYKTSRVIYISTAKQLQQDRFNQLLCKISY 96
>UniRef50_A6R196 Cluster: DNA repair protein RAD51; n=1; Ajellomyces
capsulatus NAm1|Rep: DNA repair protein RAD51 -
Ajellomyces capsulatus NAm1
Length = 297
Score = 37.5 bits (83), Expect = 0.38
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKE-----THKTVLYIDTKGDFSA 561
LD +L GI +ITE+ G +GK+Q+ +A+ C LYIDT+G F
Sbjct: 83 LDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDTEGTFRP 142
Query: 560 LRIQKILEK 534
R+ + ++
Sbjct: 143 TRLLAVAQR 151
>UniRef50_A4R1B5 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 548
Score = 37.5 bits (83), Expect = 0.38
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQ--LALQIAINCAKE--THKTVLYIDTKGDFSAL 558
LD L GIP +TE+ G +G+GKTQ L+L +A+ + +YI T+ S
Sbjct: 144 LDAALGGGIPTGYVTEITGESGAGKTQFLLSLLLAVQLPPPHGLGRKAMYIPTEAALSTR 203
Query: 557 RIQKIL 540
R+ ++L
Sbjct: 204 RVAQML 209
>UniRef50_A5HL42 Cluster: DNA primase/helicase; n=1; Phormidium
phage Pf-WMP3|Rep: DNA primase/helicase - Phormidium
phage Pf-WMP3
Length = 682
Score = 37.1 bits (82), Expect = 0.51
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Frame = -3
Query: 752 VGMEYSVSSLDNMLNRGIPAKTITELCGIAGS---GKTQLALQIAINCAKETHK-TVLYI 585
V + +SL++ML G+ +TELCG+ G GK+Q A Q+A N A+ +LYI
Sbjct: 220 VSYDTGFASLNSMLGGGLH---VTELCGLVGHTGRGKSQFAAQVAYNLAEHNEDLKMLYI 276
Query: 584 DTK 576
T+
Sbjct: 277 CTE 279
>UniRef50_A7SD26 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 264
Score = 37.1 bits (82), Expect = 0.51
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Frame = -3
Query: 752 VGMEYSVSSLDNML----NRGIPAKTITELCGIAGSGKTQLALQIAINC--AKETHK--- 600
+G + S+ LD L GI A + E G G GKT++ L +A NC + H+
Sbjct: 6 LGSKQSLDGLDKKLFVDIPDGIKAGDVVEFYGKEGCGKTEMLLHLAANCIMPRSWHELYL 65
Query: 599 -----TVLYIDTKGDFSALRIQKILE 537
+V++IDT F LR+ I+E
Sbjct: 66 GGKGVSVIFIDTDYHFQILRLIAIME 91
>UniRef50_Q6CPZ2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome E of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 413
Score = 37.1 bits (82), Expect = 0.51
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDT 579
+ SLD+ LN G ++I E+ G G GKT+ A+Q+ N + L+IDT
Sbjct: 22 IESLDDSLNDGFQPQSIYEVYGPPGIGKTKFAVQLVNN--NQNRMKCLWIDT 71
>UniRef50_A7D6B3 Cluster: KaiC domain protein; n=6; cellular
organisms|Rep: KaiC domain protein - Halorubrum
lacusprofundi ATCC 49239
Length = 499
Score = 37.1 bits (82), Expect = 0.51
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYI--DTKGDFSA 561
+ D +L+ GI T+T + G G GKT L+ Q A ++V+Y+ + KG F
Sbjct: 249 IPEFDELLHGGIERGTVTVVSGPTGVGKTTLSTQFMKEAAGRGERSVIYLFEENKGTFLT 308
Query: 560 ------LRIQKILEKCQYSFKEVAAI 501
+ + +++EK EV A+
Sbjct: 309 RSRAVNIPVDEMMEKGTLQVNEVEAL 334
>UniRef50_Q4A748 Cluster: Chromosomal replication initiator protein
dnaA; n=1; Mycoplasma synoviae 53|Rep: Chromosomal
replication initiator protein dnaA - Mycoplasma synoviae
(strain 53)
Length = 456
Score = 36.7 bits (81), Expect = 0.67
Identities = 24/58 (41%), Positives = 32/58 (55%)
Frame = -3
Query: 758 KSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYI 585
KS E ++ L N LN I LCG +GSGK+ L IA N AK+ +K+ +YI
Sbjct: 129 KSTFNELALEVLKNSLNETGEFNNIYFLCGKSGSGKSHLLSAIA-NEAKKQNKSCVYI 185
>UniRef50_A6FAX0 Cluster: Protein kinase domain protein; n=1;
Moritella sp. PE36|Rep: Protein kinase domain protein -
Moritella sp. PE36
Length = 1316
Score = 36.7 bits (81), Expect = 0.67
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = -3
Query: 767 KPHKSVGMEYSVSSLDNMLNRGIPAKT-ITELCGIAGSGKTQLALQIAINCAKETHKTVL 591
K + +G E + L +LN T + +CG AG GK++L ++ K H
Sbjct: 526 KNYAFIGREQELEQLSELLNDSEQNTTNLVHVCGEAGIGKSRLVFELRHTALKMRHHIAQ 585
Query: 590 YIDTKGDFSALRIQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKN 438
+ + + I KIL K +YS ++A ++ ++ EL L N
Sbjct: 586 CLPEHKNNALYPILKIL-KYRYSLNDIAPQVALQRLTQAMQTMELRTLENN 635
>UniRef50_A4G1Y6 Cluster: Putative uncharacterized protein; n=1;
Herminiimonas arsenicoxydans|Rep: Putative
uncharacterized protein - Herminiimonas arsenicoxydans
Length = 480
Score = 36.7 bits (81), Expect = 0.67
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLY 588
V LD++L G+P + L G GSGKT LA QI + A + + +
Sbjct: 14 VPGLDDLLGGGLPEFSFNLLAGTPGSGKTTLAHQIMFSLANPDRRALFF 62
Score = 33.1 bits (72), Expect = 8.3
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -3
Query: 746 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQ 633
+ V +LD M+ G+PA L G +GSGKT LA Q
Sbjct: 251 LSMGVPALDEMMGGGLPAGYSLLLVGPSGSGKTVLATQ 288
>UniRef50_A7IAV9 Cluster: HTR-like protein; n=1; Candidatus
Methanoregula boonei 6A8|Rep: HTR-like protein -
Methanoregula boonei (strain 6A8)
Length = 275
Score = 36.7 bits (81), Expect = 0.67
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 746 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK 600
M ++SLD +L+ G+P T+T L G G+G + A +N E H+
Sbjct: 9 MPTGIASLDPILDGGVPPGTLTLLFGDIGAGHYEFAYSSTVNSLAEMHR 57
>UniRef50_UPI00005889FA Cluster: PREDICTED: similar to LOC553395
protein; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC553395 protein -
Strongylocentrotus purpuratus
Length = 365
Score = 36.3 bits (80), Expect = 0.89
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 10/61 (16%)
Frame = -3
Query: 686 ITELCGIAGSGKTQLALQIAINC-AKETHKT---------VLYIDTKGDFSALRIQKILE 537
+ E+ G +GSGKT+L L +A C E KT V++IDT FS LR+ +LE
Sbjct: 34 VVEIYGNSGSGKTELLLNLAAMCILPERWKTIDIGGLGTSVVFIDTDHQFSMLRLFALLE 93
Query: 536 K 534
+
Sbjct: 94 R 94
>UniRef50_UPI0000585DAC Cluster: PREDICTED: similar to RAD51-like 1
(S. cerevisiae), partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to RAD51-like 1 (S.
cerevisiae), partial - Strongylocentrotus purpuratus
Length = 128
Score = 36.3 bits (80), Expect = 0.89
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = -3
Query: 737 SVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI 624
S+++LD +L G+ TITE+ G G GKTQ + +++
Sbjct: 85 SLTTLDQLLQGGLLLGTITEIAGPPGCGKTQFCMMLSV 122
>UniRef50_Q1VUX3 Cluster: Putative uncharacterized protein; n=3;
Flavobacteriaceae|Rep: Putative uncharacterized protein
- Psychroflexus torquis ATCC 700755
Length = 525
Score = 36.3 bits (80), Expect = 0.89
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = -3
Query: 677 LCGIAGSGKTQLALQIAINCAKETHKTV--LYIDTKGDFSALRIQKILEKCQYSFKEV 510
+ G+AGSGKTQL I +K T+ + ++ D KG+ + +++ L+ Q F ++
Sbjct: 191 IAGMAGSGKTQLIKDILYQISKNTNNELKFIFFDYKGEGNPEQLKPFLDATQCKFVDI 248
>UniRef50_A6Q0W7 Cluster: Circadian clock protein KaiC; n=1;
Nitratiruptor sp. SB155-2|Rep: Circadian clock protein
KaiC - Nitratiruptor sp. (strain SB155-2)
Length = 462
Score = 36.3 bits (80), Expect = 0.89
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI-NCAKETHKTVLY 588
+ D M G+P + + G GSGKT +LQIA N KE KT+L+
Sbjct: 8 IFGFDEMSYGGLPKYSNIIIGGAPGSGKTTFSLQIAFENAKKEKKKTILF 57
>UniRef50_Q00YW7 Cluster: Meiotic recombination protein DMC1,
putative; n=2; Ostreococcus|Rep: Meiotic recombination
protein DMC1, putative - Ostreococcus tauri
Length = 371
Score = 36.3 bits (80), Expect = 0.89
Identities = 33/165 (20%), Positives = 75/165 (45%), Gaps = 7/165 (4%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETH-----KTVLYIDTKGDF 567
+++D +LN G + ITE+ G GKTQ+ +A+ V +IDT+ F
Sbjct: 140 AAVDAILNGGFETRAITEIFGEWRCGKTQICHTLAVTTQMPIEMGGGCSKVAWIDTENTF 199
Query: 566 SALRIQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVN--LFKNLKNGEXXXXXXXXXX 393
+ R++ I ++ + A++S + ++ + T+++++ + K E
Sbjct: 200 RSDRLEAIADRFGL---DRDAVLSNVMVARVDTVDQMMQALIAIGAKMAEEPFKLLIVDS 256
Query: 392 XXXLPSLMFQYLGEDNKLGLSLLNSFVNYSRFICKQLNIGIICIN 258
+ + + GE ++ LN F++ R + ++ N+ ++ N
Sbjct: 257 IMAIFRVDYVARGELSE-RQQTLNQFLSRLRKLAEEFNVAVVLTN 300
>UniRef50_Q4Z9W4 Cluster: ORF021; n=4; unclassified Myoviridae|Rep:
ORF021 - Staphylococcus phage G1
Length = 418
Score = 36.3 bits (80), Expect = 0.89
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALR 555
V D +L GIP +TE+ G+ GSGK+ A+ ++ A + ++ID +G R
Sbjct: 45 VPQYDYILGGGIPLGRLTEVYGLTGSGKSTFAVHLS-RIATQLGVITIWIDIEGTADNNR 103
Query: 554 IQKI 543
++++
Sbjct: 104 MEQL 107
>UniRef50_Q6C269 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 421
Score = 36.3 bits (80), Expect = 0.89
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKE-----THKTVLYIDTKGD 570
V +D ++N G P T+ E+ G + +GK+ LQ+ +N K ++I T+
Sbjct: 95 VRKIDTVMNGGFPTGTLCEVAGESAAGKSHFLLQLCVNVQLARGEGGLGKKAVFISTE-- 152
Query: 569 FSALRIQKILEKCQYSFKEVAAIMSRIHISYI 474
S L +++++ + K +S H+S+I
Sbjct: 153 -SGLETRRLVQMMDHVIKLGHDNISLHHVSFI 183
>UniRef50_A6LZR9 Cluster: AAA ATPase; n=8; Clostridium|Rep: AAA
ATPase - Clostridium beijerinckii NCIMB 8052
Length = 161
Score = 35.9 bits (79), Expect = 1.2
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = -3
Query: 677 LCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQKILEKCQY 525
LCG GSGKT +AL +A N K K V+Y+ + ++L+ Q IL+K Y
Sbjct: 25 LCGNPGSGKTHIALALANNFLKNNIK-VVYMPYRDVITSLK-QNILDKEYY 73
>UniRef50_A5D4Z4 Cluster: BioD-like N-terminal domain of
phosphotransacetylase; n=5; Peptococcaceae|Rep:
BioD-like N-terminal domain of phosphotransacetylase -
Pelotomaculum thermopropionicum SI
Length = 363
Score = 35.9 bits (79), Expect = 1.2
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = -3
Query: 677 LCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSAL 558
+ G+AGSGKT +AL IA+N KE ++ V Y G+ S L
Sbjct: 17 ITGVAGSGKTAIALGIALNLKKEGYR-VTYFKPVGNRSRL 55
>UniRef50_Q2R1G4 Cluster: RGH2A, putative; n=5; Eukaryota|Rep:
RGH2A, putative - Oryza sativa subsp. japonica (Rice)
Length = 240
Score = 35.9 bits (79), Expect = 1.2
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3
Query: 758 KSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQI 630
+SVGME ++ L L G+P + + G G GKT LAL +
Sbjct: 119 ESVGMEDAIGKLGAWLTEGLPDLRVLAVVGFGGLGKTTLALAL 161
>UniRef50_A6STQ0 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 383
Score = 35.9 bits (79), Expect = 1.2
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -3
Query: 704 GIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQKILEK 534
GIP +TE+ G G GKT L + +A + ++ V+++D S R +IL++
Sbjct: 50 GIPRGKVTEIYGPPGVGKTTLGMHLAARVLHQ-NENVVWVDASHPISGPRFSQILQE 105
>UniRef50_P47581 Cluster: Protein recA; n=2; Mycoplasma|Rep: Protein
recA - Mycoplasma genitalium
Length = 340
Score = 35.9 bits (79), Expect = 1.2
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 728 SLDNMLNRG-IPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKG 573
+LD L G +P I EL G SGKT +AL A+ ++ KT YID +G
Sbjct: 47 NLDEALGSGGLPLGRIVELYGNESSGKTTIALN-AVASFQKAGKTACYIDAEG 98
>UniRef50_UPI0000DAE4B2 Cluster: hypothetical protein
Rgryl_01000436; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000436 - Rickettsiella
grylli
Length = 2238
Score = 35.5 bits (78), Expect = 1.5
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = -3
Query: 683 TELCGIAGSGKTQLALQIAINCAKETHKTVLYI--DTKGD 570
T L G+ G GKTQLAL+ A A+ V++I DTKGD
Sbjct: 647 TALSGLGGIGKTQLALRYAELYARHYDNNVIWINADTKGD 686
>UniRef50_Q89T73 Cluster: Protein recA; n=9; Bacteria|Rep: Protein
recA - Bradyrhizobium japonicum
Length = 506
Score = 35.5 bits (78), Expect = 1.5
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKG 573
LD +L G+ T L G AG GK+ LAL AI A ++V++ +G
Sbjct: 264 LDTLLGGGLERGTNVLLIGAAGVGKSSLALTYAIAAAARNERSVIFAFDEG 314
>UniRef50_Q57192 Cluster: L.oenos plasmid p4028 ORF1, ORF2, ORF3,
ORF4, ORF5 genes; n=1; Oenococcus oeni|Rep: L.oenos
plasmid p4028 ORF1, ORF2, ORF3, ORF4, ORF5 genes -
Oenococcus oeni (Leuconostoc oenos)
Length = 397
Score = 35.5 bits (78), Expect = 1.5
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = -3
Query: 671 GIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALR-IQKILEKCQYSFKEVAAIMS 495
G +G+GKT L + AK TVLYID KGD + IQ+I ++ +F V I
Sbjct: 71 GTSGTGKTTAILSLIKQRAK-AGSTVLYIDGKGDQGTRKDIQRIAQEYGRNFIPV-DIND 128
Query: 494 RIHISYIWTMEELVN 450
I SY W +LVN
Sbjct: 129 PIQ-SYEWDPLKLVN 142
>UniRef50_Q1QT32 Cluster: Putative circadian clock protein, KaiC;
n=1; Chromohalobacter salexigens DSM 3043|Rep: Putative
circadian clock protein, KaiC - Chromohalobacter
salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 483
Score = 35.5 bits (78), Expect = 1.5
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLY 588
+ LD + GI T+T + G G GKT L LQ A+ ++V+Y
Sbjct: 245 IGELDRLSGGGITRGTVTIISGPTGVGKTSLGLQYMHEAARRGERSVVY 293
>UniRef50_Q54G98 Cluster: AAA ATPase domain-containing protein; n=1;
Dictyostelium discoideum AX4|Rep: AAA ATPase
domain-containing protein - Dictyostelium discoideum AX4
Length = 388
Score = 35.5 bits (78), Expect = 1.5
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Frame = -3
Query: 686 ITELCGIAGSGKTQLALQIAIN-----CA--KETHKTVLYIDTKGDFSALRIQKILEK 534
+ EL G +GSGKT++AL+I +N C K V+Y D F L+++ +L+K
Sbjct: 130 VIELYGPSGSGKTEMALEILVNSILPSCEPFKGNEIGVIYFDNDFKFDILKLEILLQK 187
>UniRef50_Q1JSB1 Cluster: Putative uncharacterized protein; n=1;
Toxoplasma gondii|Rep: Putative uncharacterized protein
- Toxoplasma gondii
Length = 481
Score = 35.5 bits (78), Expect = 1.5
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQI 630
++D+ LN G+P + E+ G AG GKTQ AL +
Sbjct: 103 AVDHHLNGGVPRGMLVEISGKAGCGKTQFALSL 135
>UniRef50_A7TGZ2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 422
Score = 35.5 bits (78), Expect = 1.5
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIA---INCAKETHKTVLYIDT 579
+ LD L G +++I E+ G G GKT+L LQ+ +N + VL+I+T
Sbjct: 22 IEELDECLEDGFQSRSIYEIYGPPGIGKTRLGLQVMSNFVNDKSRADEKVLWIET 76
>UniRef50_Q566S1 Cluster: LOC553395 protein; n=4; Danio rerio|Rep:
LOC553395 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 299
Score = 35.1 bits (77), Expect = 2.0
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = -3
Query: 686 ITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDFSALRIQKILE 537
+ E G+ GSGKT+ + C TH V++IDT F LR ILE
Sbjct: 43 VVEFHGMEGSGKTETLYHLITRCLTPTHSGGLEVGVVFIDTDYHFDMLRFVSILE 97
>UniRef50_A5NQF2 Cluster: KaiC domain protein; n=1; Methylobacterium
sp. 4-46|Rep: KaiC domain protein - Methylobacterium sp.
4-46
Length = 501
Score = 35.1 bits (77), Expect = 2.0
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQ 633
V +LD ML+ G+P + T L G +G GKT L LQ
Sbjct: 262 VPALDGMLDGGLPLHSTTLLAGPSGIGKTTLGLQ 295
>UniRef50_Q384W8 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 423
Score = 35.1 bits (77), Expect = 2.0
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIA 627
LD++L G+ +TE+ G +G+GKT LAL +A
Sbjct: 140 LDDVLAGGVKCGLVTEITGASGTGKTALALNLA 172
>UniRef50_Q0V430 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 551
Score = 35.1 bits (77), Expect = 2.0
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKE----THKTVLYIDTKGDFSAL 558
LD L GIP + E+ G +G+GKTQL L + + K+ +Y+ T+ S
Sbjct: 218 LDAALGGGIPPGYLVEVTGESGAGKTQLLLTLLLAVQLPPPYGLAKSAVYVSTEAVLSTK 277
Query: 557 RIQKIL 540
R+ ++L
Sbjct: 278 RLAQLL 283
>UniRef50_Q12VV6 Cluster: KaiC; n=1; Methanococcoides burtonii DSM
6242|Rep: KaiC - Methanococcoides burtonii (strain DSM
6242)
Length = 459
Score = 35.1 bits (77), Expect = 2.0
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALR 555
+ LD +L G + + + G AG GKT +ALQ+ N AK K VLYI ++ R
Sbjct: 11 IEGLDEILG-GFKSPSTILVAGTAGVGKTTMALQMLSNAAKSGEK-VLYIPLT-TVTSER 67
Query: 554 IQKILEKCQYSFKEVA 507
+K+ + F+ ++
Sbjct: 68 FEKLQAVFPFIFENIS 83
>UniRef50_Q8EVC7 Cluster: Protein recA; n=2; Mycoplasma|Rep: Protein
recA - Mycoplasma penetrans
Length = 329
Score = 35.1 bits (77), Expect = 2.0
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 725 LDNMLN-RGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTK 576
LDN + G P I E+ G SGKT +ALQ C KE +V YID +
Sbjct: 44 LDNAIGVGGYPKGKIIEIYGNESSGKTTIALQCVKECIKE-GGSVAYIDAE 93
>UniRef50_Q48N05 Cluster: Circadian oscillation regulator KaiC
homolog; n=12; Proteobacteria|Rep: Circadian oscillation
regulator KaiC homolog - Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6)
Length = 515
Score = 34.7 bits (76), Expect = 2.7
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 782 HHIP*KPHKSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLAL-QIAINCAKET 606
HH+P K+ + V LD++L G T T + G AGSGKT + L +A CA+
Sbjct: 258 HHVP---FKAEPVPSGVKELDDLLVGGPLRGTSTLVTGPAGSGKTTVTLAYLAAACARGE 314
Query: 605 HKTVLYIDTK 576
T+ D +
Sbjct: 315 KCTIYEFDER 324
>UniRef50_Q0HEC7 Cluster: KAP P-loop domain protein; n=3;
Shewanella|Rep: KAP P-loop domain protein - Shewanella
sp. (strain MR-4)
Length = 489
Score = 34.7 bits (76), Expect = 2.7
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Frame = -3
Query: 686 ITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDT-KGDFS----ALRIQKILEKCQYS 522
+ L GI GSGKT+ ++ I AK H V+YID + DFS A+ +++++ ++
Sbjct: 43 VINLDGIYGSGKTEFIRRLYIELAKRNH-PVVYIDIWESDFSTNPLAVICSELIQQIEFI 101
Query: 521 FKE 513
KE
Sbjct: 102 LKE 104
>UniRef50_A4XK90 Cluster: Putative circadian clock protein, KaiC;
n=2; Bacteria|Rep: Putative circadian clock protein,
KaiC - Caldicellulosiruptor saccharolyticus (strain ATCC
43494 / DSM 8903)
Length = 298
Score = 34.7 bits (76), Expect = 2.7
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = -3
Query: 704 GIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYI--DTKGDF 567
GIPA ++ L G+A +GK+ A Q A+ A E + +VLYI +T +F
Sbjct: 60 GIPAYSVINLSGVADTGKSLFAEQFAVTQANEGN-SVLYITVETPAEF 106
>UniRef50_Q4CYK4 Cluster: DNA repair protein, putative; n=2;
Trypanosoma cruzi|Rep: DNA repair protein, putative -
Trypanosoma cruzi
Length = 400
Score = 34.7 bits (76), Expect = 2.7
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK 600
LD L G+ ITE+ G G+GKT AL +A+ A K
Sbjct: 125 LDGALRGGLGCGLITEITGATGAGKTAFALNLAMRAASYPKK 166
>UniRef50_Q6FIZ6 Cluster: Similar to sp|P25301 Saccharomyces
cerevisiae YDR004w RAD57; n=2; Saccharomycetales|Rep:
Similar to sp|P25301 Saccharomyces cerevisiae YDR004w
RAD57 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 466
Score = 34.7 bits (76), Expect = 2.7
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKE-----THKTVLYIDTKGDFSA 561
+D +L GI ITE+ G + +GK+QL +Q+ ++ + ++I T+GD
Sbjct: 93 IDEVLGGGISTNCITEIFGESSTGKSQLLMQLCLSVQLPISEGGLNAKCVFITTEGDLPT 152
Query: 560 LRIQKILE 537
R+ ++E
Sbjct: 153 NRLAGMIE 160
>UniRef50_Q0W7N5 Cluster: Predicted ATPase; n=1; uncultured
methanogenic archaeon RC-I|Rep: Predicted ATPase -
Uncultured methanogenic archaeon RC-I
Length = 491
Score = 34.7 bits (76), Expect = 2.7
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDT 579
+ LD +L G+P + L G G+GKT LALQ A A + VL++ T
Sbjct: 22 IEGLDELLCGGLPKGSTVLLSGPPGAGKTVLALQYAFYHASRGER-VLFVST 72
>UniRef50_Q7D3Y2 Cluster: AGR_pAT_129p; n=4; Rhizobiaceae|Rep:
AGR_pAT_129p - Agrobacterium tumefaciens (strain C58 /
ATCC 33970)
Length = 504
Score = 34.3 bits (75), Expect = 3.6
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQ 633
++ LD +L G+PA + L G GSGKT ALQ
Sbjct: 38 IAGLDEILRGGLPASNLYILQGAPGSGKTTAALQ 71
>UniRef50_Q08XB9 Cluster: KaiC domain protein; n=1; Stigmatella
aurantiaca DW4/3-1|Rep: KaiC domain protein -
Stigmatella aurantiaca DW4/3-1
Length = 491
Score = 34.3 bits (75), Expect = 3.6
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -3
Query: 740 YSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTV 594
+ ++ D ++ G+P+ + T L G G GKT LA A A+E +T+
Sbjct: 248 FGLTEFDALMEGGLPSLSTTLLAGSMGIGKTLLATHFAAQGAREGEQTL 296
>UniRef50_A5ZGX7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides caccae ATCC 43185|Rep: Putative
uncharacterized protein - Bacteroides caccae ATCC 43185
Length = 656
Score = 34.3 bits (75), Expect = 3.6
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = -3
Query: 749 GMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYI 585
G+ Y +S ++L + + G+AGSGKT + + A+N K TH VL +
Sbjct: 214 GLGYKLSKEQDLLAKSEEGAR-KRIKGVAGSGKTLVLAERAVNAHKRTHNCVLIL 267
>UniRef50_Q3IA99 Cluster: Disease resistance protein; n=1; Phaseolus
vulgaris|Rep: Disease resistance protein - Phaseolus
vulgaris (Kidney bean) (French bean)
Length = 753
Score = 34.3 bits (75), Expect = 3.6
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = -3
Query: 752 VGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKG 573
+G+E ++ + ++L+ P I +CG+ G GKT + QI A + + L +D +
Sbjct: 181 IGIEKNIGGIQSLLHLESPDVRIIGICGMGGIGKTTICDQIYQKLALQFDSSSLVLDVQD 240
Query: 572 DFSALRIQKILEK 534
I I K
Sbjct: 241 KIQRDGIDSIRTK 253
>UniRef50_Q5B8N2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 775
Score = 34.3 bits (75), Expect = 3.6
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = -3
Query: 677 LCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQKILEKCQYSFKEVAAIM 498
L G GSGKT LA QIA++ K V D G A +IQ IL ++K +++
Sbjct: 561 LNGPPGSGKTALAAQIALDSGAPFIKMVCPEDVAGYNEAAKIQHILRVFNDAYKSQTSVV 620
>UniRef50_A6SQA9 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1052
Score = 34.3 bits (75), Expect = 3.6
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -3
Query: 752 VGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKG 573
VG + ++ + L +I L G+ G GKTQ+AL+ I+ + +K V +ID
Sbjct: 170 VGRKDVLNRIQTALEASHNDPSIVVLTGVGGQGKTQIALEF-IHQHMKLYKGVFWIDASS 228
Query: 572 DFSALR-IQKILE 537
SA R ++IL+
Sbjct: 229 QKSASRGFERILK 241
>UniRef50_Q12XV7 Cluster: KaiC; n=1; Methanococcoides burtonii DSM
6242|Rep: KaiC - Methanococcoides burtonii (strain DSM
6242)
Length = 301
Score = 34.3 bits (75), Expect = 3.6
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLY 588
V+ LD+ML G+P + + G G+GKT L +Q + K K + +
Sbjct: 66 VAGLDDMLEGGVPKGSSVIVTGPPGTGKTTLCMQFLMEGVKADEKCLFF 114
>UniRef50_Q9FKM5 Cluster: DNA-repair protein XRCC3 homolog; n=18;
core eudicotyledons|Rep: DNA-repair protein XRCC3
homolog - Arabidopsis thaliana (Mouse-ear cress)
Length = 304
Score = 34.3 bits (75), Expect = 3.6
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI 624
LD L GI ++TE+ +G GKTQL LQ+++
Sbjct: 28 LDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSL 61
>UniRef50_Q0AB05 Cluster: Putative circadian clock protein, KaiC;
n=1; Alkalilimnicola ehrlichei MLHE-1|Rep: Putative
circadian clock protein, KaiC - Alkalilimnicola
ehrlichei (strain MLHE-1)
Length = 492
Score = 33.9 bits (74), Expect = 4.7
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLY 588
++ D ML+ G+ TIT + G +G GK+ +A IA A + H+ ++
Sbjct: 261 AAFDEMLHGGLENGTITLITGPSGIGKSTVAAMIAAAAAHDGHRASVF 308
>UniRef50_Q08YR0 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 429
Score = 33.9 bits (74), Expect = 4.7
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAK 612
V LD ML G+ A + T + G GSGKT LALQ + K
Sbjct: 218 VKGLDTMLQGGVWAGSSTLIEGRTGSGKTTLALQFILEGLK 258
>UniRef50_A5KMI4 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 529
Score = 33.9 bits (74), Expect = 4.7
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = -3
Query: 659 SGKTQLALQIAINCAKETHK-TVLYIDTKGDFSALRIQKILEKCQYSFKEVAAIMSRIHI 483
+G T+L L A+ +E K T +I + D +IQK+L++C+Y ++ M I
Sbjct: 164 TGGTELDLSGAVQILREKRKKTDRFIREEADKEERKIQKMLQECEYLEQD----MDEIQR 219
Query: 482 SYIWTMEELVNLFKNLKNGE 423
Y +E L K +KN E
Sbjct: 220 EYEERKQEWELLEKTIKNQE 239
>UniRef50_Q580V2 Cluster: DNA repair protein, putative; n=1;
Trypanosoma brucei|Rep: DNA repair protein, putative -
Trypanosoma brucei
Length = 477
Score = 33.9 bits (74), Expect = 4.7
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = -3
Query: 713 LNRGIPAKTITELCGIAGSGKTQLALQIAINC 618
L G A +TE+ G AGSGKTQL LQ C
Sbjct: 183 LEGGFCAGLLTEVHGEAGSGKTQLVLQCLFQC 214
>UniRef50_A3FQK6 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 133
Score = 33.9 bits (74), Expect = 4.7
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = -3
Query: 701 IPAKTITELCGIAGSGKTQLALQIAINCAKETH-----KTVLYI-DTKGDFSALRIQKI 543
I K I ELCG+ GSGKT L +A+N +YI D++G FS R+++I
Sbjct: 6 IIGKGIIELCGVPGSGKTLLCKILALNIQIPKSIGGPGLNAIYIGDSEGGFSDNRLREI 64
>UniRef50_Q757K4 Cluster: AER008Wp; n=1; Eremothecium gossypii|Rep:
AER008Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 510
Score = 33.9 bits (74), Expect = 4.7
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQ--IAINCAKETHKTV---LYIDTKGDFSA 561
+D +LN GI ITE+ G + SGK+Q +Q +A+ E + ++I T+ D
Sbjct: 94 IDALLNGGIYTHGITEVFGESSSGKSQFLMQLSLAVQLPLELDGSAGQCVFITTESDLPT 153
Query: 560 LRIQKILE 537
RI+ +++
Sbjct: 154 KRIESMIK 161
>UniRef50_Q74ZR1 Cluster: AGR137Wp; n=1; Eremothecium gossypii|Rep:
AGR137Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 503
Score = 33.9 bits (74), Expect = 4.7
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDT 579
+ LD+ L G+ ++I E+ G G GKT LQ+ I C + K VL +DT
Sbjct: 22 IPQLDDALGAGLDPRSIYEVFGPPGIGKTLFGLQV-IRCNR--GKRVLVVDT 70
>UniRef50_Q0W053 Cluster: Putative ATPase; n=1; uncultured
methanogenic archaeon RC-I|Rep: Putative ATPase -
Uncultured methanogenic archaeon RC-I
Length = 254
Score = 33.9 bits (74), Expect = 4.7
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDT 579
V LD +L+ G + + G GSGKT LALQ A A+ K VLY+ T
Sbjct: 17 VDGLDILLSGGFVKGSTILISGSYGSGKTLLALQYAFYQAQRGDK-VLYVST 67
>UniRef50_A3KGH9 Cluster: RAD51 homolog; n=13; Eukaryota|Rep: RAD51
homolog - Mus musculus (Mouse)
Length = 236
Score = 33.5 bits (73), Expect = 6.2
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = -3
Query: 686 ITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDFSALRIQKILEKCQYS 522
ITE+ G +GKTQ+ +A+ C + +YIDT+G F R+ + E+ S
Sbjct: 1 ITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLS 60
Query: 521 FKEV 510
+V
Sbjct: 61 GSDV 64
>UniRef50_Q9RVC4 Cluster: DNA repair protein radA; n=4;
Deinococci|Rep: DNA repair protein radA - Deinococcus
radiodurans
Length = 503
Score = 33.5 bits (73), Expect = 6.2
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALR 555
+ LD +L G+ A +T + G G GK+ L LQ+A A TVLY+ + +R
Sbjct: 136 IPELDRVLGGGLVAGGVTLIGGEPGIGKSTLLLQVADKVASR-GGTVLYVAGEESLEQIR 194
Query: 554 IQ 549
++
Sbjct: 195 LR 196
>UniRef50_Q82J09 Cluster: Putative ATP/GTP-binding protein; n=3;
Streptomyces|Rep: Putative ATP/GTP-binding protein -
Streptomyces avermitilis
Length = 1330
Score = 33.5 bits (73), Expect = 6.2
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = -3
Query: 785 WHHIP*KPHKSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKET 606
W +P + + G E +S ++L P + L G++G GKTQLA++ + E
Sbjct: 500 WGGVPRRNTRFTGRESLLSDAYSLLKGAEPGAGVLTLHGMSGVGKTQLAVEYVYRFSSE- 558
Query: 605 HKTVLYI--DTKGDF 567
+ V ++ D +G F
Sbjct: 559 YDVVWWVGADNRGVF 573
>UniRef50_Q73P83 Cluster: ABC transporter, ATP-binding/permease
protein; n=1; Treponema denticola|Rep: ABC transporter,
ATP-binding/permease protein - Treponema denticola
Length = 581
Score = 33.5 bits (73), Expect = 6.2
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -3
Query: 758 KSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIA 627
+ V Y+ + + ++ +P KT+T L G++GSGKT + +A
Sbjct: 348 EDVSFAYAEKEVLHNISFSVPEKTVTALAGLSGSGKTTIVNLLA 391
>UniRef50_Q6HQL4 Cluster: ABC transporter ATP-binding protein,
N-terminus; n=13; Bacillus cereus group|Rep: ABC
transporter ATP-binding protein, N-terminus - Bacillus
anthracis
Length = 169
Score = 33.5 bits (73), Expect = 6.2
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = -3
Query: 278 IGIICINMQTRWVDQDLTDVEDEENSTAYKDSFTEKRYRCLGRYWQHIPTLVLELEKIKE 99
IG+ NM T V Q + + D+ N K SF+EKR +GR H P LV+ LE+ ++
Sbjct: 93 IGLYKSNMSTEEVVQSV-GLLDKLNVKIEKLSFSEKRRLHIGRVMIHNPDLVI-LEEPEQ 150
Query: 98 N-DNENNSGIKITVL 57
N D E+ I+ ++
Sbjct: 151 NVDTESTIIIRKAIM 165
>UniRef50_A5D488 Cluster: RecA-superfamily ATPase; n=1;
Pelotomaculum thermopropionicum SI|Rep: RecA-superfamily
ATPase - Pelotomaculum thermopropionicum SI
Length = 460
Score = 33.5 bits (73), Expect = 6.2
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 767 KPHKSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQ 633
+ H++ + V LDN+L G+P + G +G+GKT L +Q
Sbjct: 231 RAHENELLHTGVPGLDNLLRGGLPRGACVTVVGGSGTGKTLLGMQ 275
>UniRef50_A2UBG3 Cluster: Cobyrinic acid a,c-diamide synthase; n=1;
Bacillus coagulans 36D1|Rep: Cobyrinic acid a,c-diamide
synthase - Bacillus coagulans 36D1
Length = 286
Score = 33.5 bits (73), Expect = 6.2
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -3
Query: 713 LNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLY 588
+ GIPAKT+ G G GK+ +++ +A+ A+ K +L+
Sbjct: 14 MQHGIPAKTLAVASGKGGVGKSNISVNLAMALAERGKKVLLF 55
>UniRef50_Q5ULN8 Cluster: Orf76; n=1; Lactobacillus phage LP65|Rep:
Orf76 - Lactobacillus phage LP65
Length = 496
Score = 33.5 bits (73), Expect = 6.2
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKG 573
+S+LD L G+ I +CG +G GKT + +A + ++ VLY+ +G
Sbjct: 190 LSTLDIALKGGLQPGEIGLICGASGFGKTAILTNLAAYYSLVSNNNVLYVYLEG 243
>UniRef50_Q4CWC1 Cluster: DNA repair protein, putative; n=3;
Trypanosoma cruzi|Rep: DNA repair protein, putative -
Trypanosoma cruzi
Length = 453
Score = 33.5 bits (73), Expect = 6.2
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -3
Query: 704 GIPAKTITELCGIAGSGKTQLALQIAINCAKE 609
G A ++E+ G AGSGKTQL LQ ++C +
Sbjct: 175 GFRAGFVSEVYGEAGSGKTQLVLQSLLHCVAQ 206
>UniRef50_Q24DN8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 318
Score = 33.5 bits (73), Expect = 6.2
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = -3
Query: 746 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDF 567
+ + LD++L G+ + EL G SGK+ LA ++ K K Y+D F
Sbjct: 83 LTFGEKELDDLLEGGLQIGKVYELSGYPCSGKSILAQKLISQNFKCNQKGAWYLDISNQF 142
Query: 566 SALRIQKI 543
+ R K+
Sbjct: 143 NLKRFLKM 150
>UniRef50_A5K641 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 333
Score = 33.5 bits (73), Expect = 6.2
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = -3
Query: 746 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCA-----KETHKTVLYID 582
+++ L+ G+ ++ E+ G+ GSGKTQ AL + +E V Y+
Sbjct: 30 LQFEDKKLNRFFENGMLNYSLVEVVGVPGSGKTQFALTLCAELLLKMIDEERQAIVFYVY 89
Query: 581 TKGDFSALRIQKILE 537
F R+++I+E
Sbjct: 90 FNRMFPMRRLEEIIE 104
>UniRef50_Q7S8S8 Cluster: Putative uncharacterized protein
NCU08806.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU08806.1 - Neurospora crassa
Length = 298
Score = 33.5 bits (73), Expect = 6.2
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 728 SLD-NMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKE 609
SLD ++ GI +TE+ G G GKT +Q+A NC E
Sbjct: 58 SLDIEIVTGGIQKGQVTEIWGPPGVGKTAFGIQLAANCLSE 98
>UniRef50_Q6FM82 Cluster: Similar to sp|P38953 Saccharomyces
cerevisiae YDR076w RAD55 DNA repair protein; n=1;
Candida glabrata|Rep: Similar to sp|P38953 Saccharomyces
cerevisiae YDR076w RAD55 DNA repair protein - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 337
Score = 33.5 bits (73), Expect = 6.2
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-TVLYIDTKG 573
+++LDN L+ G K+ E+ GI G GKT LA + +E VL+I T G
Sbjct: 22 LTALDNELDGGFRYKSSYEIYGIPGIGKTWLASETVKTYLQENDDGKVLWITTSG 76
>UniRef50_Q4PC21 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 857
Score = 33.5 bits (73), Expect = 6.2
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = -3
Query: 710 NRGIPAKTITELCGIAGSGKTQLALQIAI 624
+RG+P+ +I E+ G GSGK+ L LQ AI
Sbjct: 350 DRGLPSGSILEVLGPPGSGKSSLLLQFAI 378
>UniRef50_A2BKD6 Cluster: Universally conserved protein; n=1;
Hyperthermus butylicus DSM 5456|Rep: Universally
conserved protein - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 250
Score = 33.5 bits (73), Expect = 6.2
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = -3
Query: 746 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYI 585
+++ V LD +L RGIP +++ + G +G+GK+ L Q+ + + V+Y+
Sbjct: 6 VKFGVPILDKLLPRGIPRRSLVIMVGDSGTGKS-LITQLMAGSFLQRGEKVIYV 58
>UniRef50_P08098 Cluster: Mobilization protein A; n=6;
Enterobacteriaceae|Rep: Mobilization protein A -
Escherichia coli
Length = 529
Score = 33.5 bits (73), Expect = 6.2
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 692 KTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSAL 558
KT ++ G+ GSGK+ +A I ++ V+Y D +G +AL
Sbjct: 196 KTNIQILGLPGSGKSVMATNALIRSVRDFGDAVVYFDQRGPVAAL 240
>UniRef50_UPI00015B60FD Cluster: PREDICTED: similar to disheveled
associated activator of morphogenesis; n=2;
Apocrita|Rep: PREDICTED: similar to disheveled
associated activator of morphogenesis - Nasonia
vitripennis
Length = 2325
Score = 33.1 bits (72), Expect = 8.3
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +1
Query: 244 HLVCMFIQIIPIFSCLQINRL*FTNEFNNDKPSLLSSPRY*NIREGKESMTSNTKLSITN 423
HL+ + II FS L IN +EF+N SLL + + +++ K+ + N K ++ N
Sbjct: 612 HLIFIVPPIIDEFSSLYINENLNGSEFSNKIESLLENSFFEHLKV-KKLVVENIKTAVVN 670
Query: 424 SPFFR 438
S FR
Sbjct: 671 SANFR 675
>UniRef50_Q5PF37 Cluster: DNA replication; n=18; root|Rep: DNA
replication - Salmonella paratyphi-a
Length = 478
Score = 33.1 bits (72), Expect = 8.3
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -3
Query: 749 GMEYSVSSLDNMLN-RGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVL 591
GM + SLD ML+ +G+ ++ + GKT L Q+AINCA K L
Sbjct: 190 GMSTGIPSLDRMLSPKGLVKGSLFVIGARPKMGKTTLYSQMAINCAVHEKKPAL 243
>UniRef50_Q1PXH1 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 762
Score = 33.1 bits (72), Expect = 8.3
Identities = 25/70 (35%), Positives = 37/70 (52%)
Frame = -3
Query: 698 PAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQKILEKCQYSF 519
P++ I L GI GSGKT+L LQ I E K L++ + ++ IQ+I E+ F
Sbjct: 243 PSQGIILLHGITGSGKTELYLQ-TIAKLLEQGKKALFLVPEISLTSQSIQRIKER----F 297
Query: 518 KEVAAIMSRI 489
VA + S +
Sbjct: 298 NNVAVLHSHL 307
>UniRef50_Q1CXY6 Cluster: Putative uncharacterized protein; n=2;
Cystobacterineae|Rep: Putative uncharacterized protein -
Myxococcus xanthus (strain DK 1622)
Length = 500
Score = 33.1 bits (72), Expect = 8.3
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -3
Query: 764 PHKSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYI 585
P + + + LD +L+ G L G+ GSGKT A Q+ + AK VLY+
Sbjct: 6 PRVAERISTGIPGLDTVLHGGFRKARTYMLMGLPGSGKTIFANQVCFHHAKRHGGRVLYL 65
>UniRef50_Q7RTC3 Cluster: Putative uncharacterized protein PY00071;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY00071 - Plasmodium yoelii yoelii
Length = 2736
Score = 33.1 bits (72), Expect = 8.3
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 7/116 (6%)
Frame = -3
Query: 353 EDNKLGLSL-LNSFVNYSRFICKQLNIGIICINM--QTRWVDQDLTDVEDEEN----STA 195
E N L S +N N I K+ N I N + +++D D D+ ST
Sbjct: 1683 EYNNLNASTSINPNNNIENLINKEENDNSILTNQKFEDKYIDNLNNDKHDKNQIECTSTT 1742
Query: 194 YKDSFTEKRYRCLGRYWQHIPTLVLELEKIKENDNENNSGIKITVLHSIDSDYENR 27
KD + R C + + + + +K K+N N+N++ + I H I D EN+
Sbjct: 1743 KKDKNKKNRPNC-NKKGKICKNELSKHQKDKDNPNDNSNNMNIQSEHIITEDIENK 1797
>UniRef50_Q6FIK9 Cluster: Similar to sp|P36224 Saccharomyces
cerevisiae YMR294w JNM1 mitosis protein; n=1; Candida
glabrata|Rep: Similar to sp|P36224 Saccharomyces
cerevisiae YMR294w JNM1 mitosis protein - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 346
Score = 33.1 bits (72), Expect = 8.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 185 SFTEKRYRCLGRYWQHIPTLVLELEKIKENDNE 87
++ K YR L Y +H PTLV LE + DN+
Sbjct: 260 TYLMKMYRLLDEYTEHFPTLVKRLESYNDIDNK 292
>UniRef50_Q5UXD0 Cluster: Circadian regulator; n=3;
Halobacteriaceae|Rep: Circadian regulator - Haloarcula
marismortui (Halobacterium marismortui)
Length = 389
Score = 33.1 bits (72), Expect = 8.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -3
Query: 746 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQ 633
++ + LD M+ GIP + + G AG+GKT LQ
Sbjct: 163 VDIGIEGLDQMIQGGIPQRHLIVTIGSAGTGKTTFGLQ 200
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,517,587
Number of Sequences: 1657284
Number of extensions: 15075682
Number of successful extensions: 37600
Number of sequences better than 10.0: 197
Number of HSP's better than 10.0 without gapping: 35957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37530
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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