Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e14r
(796 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0163 - 1125364-1125422,1126062-1126205,1126640-1126756,112... 52 5e-07
12_01_0287 - 2152179-2152424,2153300-2153339,2153612-2153831,215... 46 5e-05
09_01_0023 - 434250-434408,435614-435684,436053-436143,436208-43... 46 5e-05
12_02_0419 + 18916995-18917090,18917703-18917851,18917873-189180... 42 6e-04
02_04_0256 + 21331396-21332268 42 6e-04
11_06_0342 - 22523610-22524332 36 0.037
11_06_0395 + 23088737-23088823,23090198-23090346,23090570-230907... 35 0.065
09_02_0569 - 10752756-10753164,10753229-10753644,10754149-107553... 33 0.26
11_01_0772 - 6455042-6458107 33 0.35
01_06_1488 + 37716986-37717076,37717424-37717558,37717755-377178... 33 0.35
11_01_0283 - 2095291-2095566,2095962-2096348,2096523-2096881,209... 31 1.4
04_03_0504 + 16616026-16616137,16616613-16616768,16616884-166170... 31 1.4
11_01_0791 + 6627961-6630702 30 2.4
01_07_0154 - 41532220-41533252,41533786-41533971,41534759-415350... 30 2.4
09_02_0154 + 5055946-5058721,5058754-5058770 29 3.2
04_01_0078 - 879016-881288,884676-885141 29 4.3
01_06_1320 + 36272716-36273339,36274222-36275762,36276349-362764... 29 4.3
09_04_0541 + 18437075-18440062 29 5.6
03_05_0444 + 24396375-24396584,24396968-24397021,24397426-243975... 29 5.6
11_08_0001 + 27467447-27467707,27467831-27468433 28 7.4
09_02_0207 - 5793848-5794276,5794523-5794645,5794742-5795250,579... 28 7.4
04_03_0508 + 16643416-16643530,16643939-16644094,16644244-166444... 28 7.4
03_02_0466 - 8690469-8690522,8691008-8691113,8691216-8691457,869... 28 7.4
11_06_0248 + 21680237-21680392,21680450-21681141,21681397-216817... 28 9.8
08_02_1137 + 24623967-24623991,24625815-24625831,24626100-246262... 28 9.8
05_01_0072 - 486211-486254,486350-486524,486658-486852,487489-48... 28 9.8
>05_01_0163 -
1125364-1125422,1126062-1126205,1126640-1126756,
1126835-1126926,1127942-1128022,1128323-1128378,
1128496-1128559,1128645-1128748,1129578-1129724,
1129876-1129989,1130070-1130153
Length = 353
Score = 52.0 bits (119), Expect = 5e-07
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Frame = -3
Query: 737 SVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI-----NCAKETHKTVLYIDTKG 573
++ LD L+ GIPA +TE+ G +G GKTQ L++A+ C + VLYIDT+
Sbjct: 85 TLRGLDEALHGGIPAGKLTEVVGPSGIGKTQFCLKLALLATLPECYGGLNGRVLYIDTES 144
Query: 572 DFSALRIQKILEK 534
FS+ R+ +I EK
Sbjct: 145 KFSSRRMIEIGEK 157
>12_01_0287 -
2152179-2152424,2153300-2153339,2153612-2153831,
2153917-2153995,2154087-2154155,2154237-2154329,
2154411-2154477,2154579-2154640,2154729-2154774,
2155359-2155404,2155490-2155547,2155717-2155755,
2155849-2155920,2156067-2156158,2157036-2157135
Length = 442
Score = 45.6 bits (103), Expect = 5e-05
Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDFS 564
+LD +L GI ITE G SGKTQLA + ++ H V YIDT+G F
Sbjct: 114 ALDKLLGGGIETLCITEAFGEFRSGKTQLAHTLCVSAQLPIHMHGGNGKVAYIDTEGTFR 173
Query: 563 ALRIQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNL 435
RI I E+ + A++ I + +T E NL L
Sbjct: 174 PERIVPIAERFG---MDANAVLDNIIYARAYTYEHQYNLLLGL 213
>09_01_0023 -
434250-434408,435614-435684,436053-436143,436208-436321,
436523-436657,436832-436913,437095-437195,437425-437490
Length = 272
Score = 45.6 bits (103), Expect = 5e-05
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALR 555
+ +D +L G+ +TE+ G + SGKTQ+ L A + A V+Y+DT FS R
Sbjct: 54 LQGVDALLGGGLRQGQLTEITGQSSSGKTQVCLCSASHVAARQLGVVMYLDTSNSFSPSR 113
Query: 554 IQKILE 537
I +I++
Sbjct: 114 IARIVD 119
>12_02_0419 +
18916995-18917090,18917703-18917851,18917873-18918063,
18918178-18918269,18918456-18918550,18918920-18919049,
18919178-18919219
Length = 264
Score = 41.9 bits (94), Expect = 6e-04
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDFSA 561
LD +L+ GI +ITE+ G SGKTQL + + C + LYID +G F
Sbjct: 140 LDKILDGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYIDAEGTFRP 199
Query: 560 LRIQKILEKCQYSFKEVAAIMSRIHIS 480
R+ +I ++ + A + R S
Sbjct: 200 QRLLQIADRFAIMIVDSATALYRTDFS 226
>02_04_0256 + 21331396-21332268
Length = 290
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI 624
LD +L+ G+P ++TE+ G + SGKTQL LQ+A+
Sbjct: 50 LDRLLSGGLPPASVTEIAGESASGKTQLCLQLAL 83
>11_06_0342 - 22523610-22524332
Length = 240
Score = 35.9 bits (79), Expect = 0.037
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3
Query: 758 KSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQI 630
+SVGME ++ L L G+P + + G G GKT LAL +
Sbjct: 119 ESVGMEDAIGKLGAWLTEGLPDLRVLAVVGFGGLGKTTLALAL 161
>11_06_0395 +
23088737-23088823,23090198-23090346,23090570-23090708,
23090795-23090889,23090967-23091080,23091674-23091803,
23091931-23092052,23092889-23093007,23093946-23094034,
23094072-23094245,23094310-23094616,23094726-23095180,
23095334-23096315,23096381-23097396,23097757-23097792,
23098065-23098130
Length = 1359
Score = 35.1 bits (77), Expect = 0.065
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = -3
Query: 704 GIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDFSALRIQKIL 540
GI +ITE+ G SGKTQL + + C + LYID +G F R+ +I
Sbjct: 96 GIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIA 155
Query: 539 EK 534
++
Sbjct: 156 DR 157
>09_02_0569 -
10752756-10753164,10753229-10753644,10754149-10755349,
10756770-10756991,10757615-10757767,10757883-10758034,
10758142-10758222,10758353-10758598,10759394-10759516
Length = 1000
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = -3
Query: 677 LCGIAGSGKTQLALQI--AINCAKETHK--TVLYID 582
+CG+ GSGKT L Q+ +CA ETH+ V+Y++
Sbjct: 480 ICGMGGSGKTTLLKQLNNIFSCAAETHEFDHVIYVE 515
>11_01_0772 - 6455042-6458107
Length = 1021
Score = 32.7 bits (71), Expect = 0.35
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 767 KPHKSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQI 630
K VGME + L + + GI A + + G+ G GKT L L +
Sbjct: 165 KDEDLVGMENNRQHLKQLFSHGISALRVISVWGMGGMGKTTLVLNV 210
>01_06_1488 +
37716986-37717076,37717424-37717558,37717755-37717831,
37717934-37718181,37718503-37718559,37718665-37718800,
37718944-37719001,37719110-37719195,37719270-37719326,
37719537-37719557,37720553-37720954,37721500-37721647,
37721940-37722036,37724065-37724202,37724496-37724598,
37724792-37724828,37724905-37725014,37725141-37725164
Length = 674
Score = 32.7 bits (71), Expect = 0.35
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 10/59 (16%)
Frame = -3
Query: 686 ITELCGIAGSGKTQLALQIAINCA-----KETH-----KTVLYIDTKGDFSALRIQKIL 540
+ E+ G + SGK+QL L A+ C K T+ K V+Y+D F LR+ +IL
Sbjct: 439 VVEIAGPSNSGKSQLLLTAAVQCILPKEWKGTYFGGLGKVVMYLDLDCRFDVLRLAQIL 497
>11_01_0283 -
2095291-2095566,2095962-2096348,2096523-2096881,
2097275-2097398,2097480-2097548,2098536-2098584,
2099185-2099299,2099823-2099872,2099969-2100106,
2101136-2101197,2102066-2102180,2103433-2103664,
2103748-2103826,2103925-2103993,2104079-2104171,
2104577-2104622,2105223-2105268,2105354-2105411,
2105577-2105615,2105712-2105783,2105930-2106021,
2106824-2106923
Length = 889
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAIN 621
+LD +L GI ITE G SGKTQLA + ++
Sbjct: 114 ALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVS 149
>04_03_0504 +
16616026-16616137,16616613-16616768,16616884-16617045,
16618152-16618480
Length = 252
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 158 LGRYWQHIPTLVLELEKIKE-NDNENNSGIKITVLHSIDSD 39
+G WQH+ VL++EKI+E +ENN ++ + +D
Sbjct: 121 VGNLWQHVDLKVLKMEKIRELLQDENNEEEEVNSFEAKKAD 161
>11_01_0791 + 6627961-6630702
Length = 913
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 752 VGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQI 630
VG+EY+ L +L P + + G+ G GKT LAL +
Sbjct: 172 VGIEYNRKRLLELLYPEEPGHKVITVSGMGGLGKTTLALDV 212
>01_07_0154 -
41532220-41533252,41533786-41533971,41534759-41535039,
41535184-41535318,41535427-41535573,41535841-41536010,
41536110-41536197,41536999-41537219,41537725-41537810,
41537916-41537962
Length = 797
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -3
Query: 704 GIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFS 564
G+P + EL G SGKT LAL + + A++ YID + F+
Sbjct: 115 GLPKGRMVELFGKEASGKTTLALHV-VKEAQKKGGCCAYIDAENAFN 160
>09_02_0154 + 5055946-5058721,5058754-5058770
Length = 930
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 752 VGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQI 630
VG + + +L G +T+ +CG+ G GKT LA I
Sbjct: 177 VGNKEESEKVMKLLIHGEETRTVISICGMGGLGKTTLARAI 217
>04_01_0078 - 879016-881288,884676-885141
Length = 912
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Frame = -3
Query: 689 TITELCGIAGSGKTQLALQIAINCAKETH-KTVLYIDTKGDFSALRI-QKILE----KCQ 528
T + GIAGSGKT LA + ++ H V+++D FS +I +++LE +
Sbjct: 45 TTIGIYGIAGSGKTILAQYVCEYEKEDGHFSPVMWVDVSQSFSVDKIYRQMLEGAIGRPS 104
Query: 527 YSFKEVAAIMSRI 489
Y ++ + A+ +++
Sbjct: 105 YKYQNLDALENKL 117
>01_06_1320 + 36272716-36273339,36274222-36275762,36276349-36276490,
36276622-36276729,36276814-36277026,36277113-36277223,
36278056-36278250,36278874-36279048,36279189-36279226
Length = 1048
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Frame = -3
Query: 767 KPH-KSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVL 591
KPH +SV +E + M + + + + G + ++ + + E L
Sbjct: 920 KPHERSVIIEKLAGQIIQMSQQKFASNVVEKCLTFGGPAEREVLINEMLGTTDENEP--L 977
Query: 590 YIDTKGDFSALRIQKILEKCQYSFKEVAAIMSRIHIS 480
K F +QK+LE C +E+ ++H+S
Sbjct: 978 QAMMKDQFGNYVVQKVLETCDDQQRELILSRVKVHLS 1014
>09_04_0541 + 18437075-18440062
Length = 995
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = -3
Query: 671 GIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQKILEKCQYSFKEVAA 504
G +G GKT+LAL+ A + + +K VL+I G+ LR Q IL Y +++A
Sbjct: 467 GASGIGKTELALEFAYRYS-QRYKMVLWIG--GEARYLR-QNILNLSMYLGLDISA 518
>03_05_0444 +
24396375-24396584,24396968-24397021,24397426-24397517,
24397610-24397685,24397838-24397900,24398002-24398094,
24398694-24398819,24398895-24398999,24399071-24399127,
24399149-24399274,24399348-24399424,24400312-24400384,
24400430-24400492
Length = 404
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDF 567
+LD L G+P + E+ G SGKT LAL AI ++ + +D + F
Sbjct: 128 TLDFALGGGLPKGRVVEVYGPESSGKTTLALH-AIAEVQKLGGNAMLVDAEHAF 180
>11_08_0001 + 27467447-27467707,27467831-27468433
Length = 287
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 239 DQDLTDVED-EENSTAYKDSFTEKRYRCLGRYWQHIPTLVLELEKIKE 99
DQ+L E E +S A D F RCL R + PT+ +E++K+
Sbjct: 222 DQELLSTEALETHSIARIDRFAAIAVRCLKRIVEKRPTMAEVVEELKQ 269
>09_02_0207 -
5793848-5794276,5794523-5794645,5794742-5795250,
5795543-5795648,5795798-5795959,5796094-5796144,
5796229-5796394,5796624-5797093
Length = 671
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 116 LEKIKENDNENNSGIKITVLHSIDSDYENRPLYF 15
LEK KE +EN + + T +S +D++N + F
Sbjct: 434 LEKTKETKSENKTNVHATNFNSFVADFDNLKVNF 467
>04_03_0508 +
16643416-16643530,16643939-16644094,16644244-16644405,
16644964-16645121,16645241-16645294,16645950-16646105,
16646241-16646582
Length = 380
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3
Query: 146 WQHIPTLVLELEKIKENDNENNSGIKITVLHSIDSDYENR 27
WQH+ VL++EKIK D G K T + ++S EN+
Sbjct: 126 WQHLDIKVLKMEKIK--DMLQGVGDKSTCANEMNSFPENQ 163
>03_02_0466 -
8690469-8690522,8691008-8691113,8691216-8691457,
8691477-8691546,8692224-8692499,8693058-8693137,
8693408-8693489,8693566-8693663,8693868-8693936,
8694015-8694113,8694681-8694737,8694874-8695039,
8695152-8695196,8695286-8695347,8695425-8695532,
8695719-8695769,8695843-8695944,8696362-8696448,
8696560-8696823,8696977-8697189,8697337-8697398,
8697517-8697849,8697943-8698138
Length = 973
Score = 28.3 bits (60), Expect = 7.4
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -3
Query: 698 PAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQ-KILEKCQ 528
P + + LCG G GKT LA A +C V+ I+ D SA I+ KIL+ Q
Sbjct: 353 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYH----VVEINASDDRSASSIEPKILDVIQ 406
>11_06_0248 +
21680237-21680392,21680450-21681141,21681397-21681724,
21681945-21682801,21682928-21683378,21683761-21684066,
21684136-21684456,21684539-21684745,21685568-21685810
Length = 1186
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 752 VGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQI 630
+GM+ + L +LN G + + G+ G GKT LA ++
Sbjct: 182 LGMDKDMDKLVGLLNDGQQECKVIAIIGLCGVGKTTLAEEL 222
>08_02_1137 +
24623967-24623991,24625815-24625831,24626100-24626216,
24626399-24626440,24627246-24629705
Length = 886
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = -3
Query: 710 NRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYI 585
++G + ++ + G +G GKT+LAL+ A + + +K VL+I
Sbjct: 346 SKGYGSASVLCITGSSGIGKTELALEFAYRYS-QRYKMVLWI 386
>05_01_0072 - 486211-486254,486350-486524,486658-486852,487489-487599,
487693-487905,488432-488539,488621-488762,489157-490418,
490460-490480,490842-491228
Length = 885
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = -3
Query: 767 KPH-KSVGMEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVL 591
KPH +S +E + + M + + I + + Q+ + + E+ L
Sbjct: 755 KPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGNPVERQILISEMLGSTNESEH--L 812
Query: 590 YIDTKGDFSALRIQKILEKCQYSFKEVAAIMSRI 489
+ K F+ +QK+LE C +E AI++RI
Sbjct: 813 EVMMKDQFANYVVQKVLETCDDQQRE--AILTRI 844
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,236,680
Number of Sequences: 37544
Number of extensions: 374697
Number of successful extensions: 802
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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