Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e14r
(796 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB013341-1|BAA25914.1| 328|Homo sapiens Trad protein. 69 2e-11
Y15572-1|CAA75681.1| 328|Homo sapiens R51H3 protein. 69 3e-11
BC014422-1|AAH14422.1| 328|Homo sapiens RAD51-like 3 (S. cerevi... 69 3e-11
AY623116-1|AAT38112.1| 328|Homo sapiens RAD51-like 3 (S. cerevi... 69 3e-11
AF034956-1|AAC39719.1| 289|Homo sapiens RAD51D protein. 67 8e-11
BC107753-1|AAI07754.1| 376|Homo sapiens RAD51 homolog C (S. cer... 53 1e-06
AY623112-1|AAT38108.1| 376|Homo sapiens RAD51 homolog C (S. cer... 53 1e-06
AF029669-1|AAC39604.1| 376|Homo sapiens Rad51C protein. 53 1e-06
Y15571-1|CAA75680.1| 350|Homo sapiens R51H2 protein. 49 2e-05
U92074-1|AAB63358.1| 350|Homo sapiens RecA-like protein protein. 49 2e-05
U84138-1|AAC39723.1| 350|Homo sapiens DNA repair protein RAD51B... 49 2e-05
DQ160197-1|AAZ85144.1| 350|Homo sapiens RAD51-like 1 (S. cerevi... 49 2e-05
CR536560-1|CAG38797.1| 350|Homo sapiens RAD51L1 protein. 49 2e-05
BC030219-1|AAH30219.1| 384|Homo sapiens RAD51-like 1 (S. cerevi... 49 2e-05
BT019705-1|AAV38511.1| 339|Homo sapiens RAD51 homolog (RecA hom... 43 0.001
D14134-1|BAA03189.1| 339|Homo sapiens RAD51 protein. 42 0.002
D13804-1|BAA02962.1| 339|Homo sapiens HsRad51 protein. 42 0.002
CR536559-1|CAG38796.1| 339|Homo sapiens RAD51 protein. 42 0.002
AY196785-1|AAN87149.1| 339|Homo sapiens RAD51 homolog (RecA hom... 42 0.002
AF233744-1|AAF69145.1| 339|Homo sapiens RAD51 protein. 42 0.002
AF165094-1|AAD49705.1| 339|Homo sapiens Rad51 protein. 42 0.002
BT007417-1|AAP36085.1| 346|Homo sapiens X-ray repair complement... 41 0.004
BC011725-1|AAH11725.1| 346|Homo sapiens X-ray repair complement... 41 0.004
BC001036-1|AAH01036.1| 346|Homo sapiens X-ray repair complement... 41 0.004
AF508041-1|AAM23015.1| 346|Homo sapiens X-ray repair complement... 41 0.004
AF037222-1|AAC04805.1| 346|Homo sapiens XRCC3 protein. 41 0.004
AF035586-1|AAC05368.1| 346|Homo sapiens X-ray repair cross-comp... 41 0.004
BT007339-1|AAP36003.1| 134|Homo sapiens RAD51 homolog C (S. cer... 38 0.032
BC101485-1|AAI01486.1| 134|Homo sapiens RAD51C protein protein. 38 0.032
BC093930-1|AAH93930.1| 134|Homo sapiens RAD51C protein protein. 38 0.032
BC000667-1|AAH00667.1| 134|Homo sapiens RAD51C protein protein. 38 0.032
AF029670-1|AAC39605.1| 135|Homo sapiens Rad51C truncated protei... 38 0.032
AK131299-1|BAD18467.1| 340|Homo sapiens protein ( Homo sapiens ... 37 0.096
U93570-1|AAC51272.1| 338|Homo sapiens p40 protein. 34 0.68
AF370457-1|AAP30718.1| 248|Homo sapiens ovarian epithelial carc... 33 0.90
U93567-1|AAC51266.1| 338|Homo sapiens p40 protein. 33 1.2
U93574-1|AAC51278.1| 338|Homo sapiens p40 protein. 33 1.6
U93573-1|AAC51277.1| 338|Homo sapiens p40 protein. 33 1.6
U93572-1|AAC51275.1| 338|Homo sapiens p40 protein. 33 1.6
U93569-1|AAC51270.1| 338|Homo sapiens p40 protein. 33 1.6
U93568-1|AAC51268.1| 338|Homo sapiens p40 protein. 33 1.6
U93566-1|AAC51265.1| 338|Homo sapiens p40 protein. 33 1.6
U93564-1|AAC51262.1| 338|Homo sapiens p40 protein. 33 1.6
U09116-1|AAB60344.1| 338|Homo sapiens ORF1 protein. 33 1.6
M80343-1|AAB59367.1| 338|Homo sapiens protein ( Human transposo... 33 1.6
M19503-1|AAA36590.1| 338|Homo sapiens protein ( Human Line-1 re... 33 1.6
AF421375-2|AAL50636.1| 338|Homo sapiens unknown protein. 33 1.6
AF149422-1|AAD38784.1| 338|Homo sapiens unknown protein. 33 1.6
AF148856-1|AAD39214.1| 338|Homo sapiens unknown protein. 33 1.6
AB018360-1|BAA33779.1| 95|Homo sapiens TRAD-d4 protein. 33 1.6
AK125132-1|BAC86059.1| 220|Homo sapiens protein ( Homo sapiens ... 31 6.3
U93571-1|AAC51274.1| 337|Homo sapiens p40 protein. 30 8.4
D64108-1|BAA10970.1| 340|Homo sapiens DMC1 homologue protein. 30 8.4
D63882-1|BAA09932.1| 340|Homo sapiens HsLim15 protein. 30 8.4
CR456486-1|CAG30372.1| 340|Homo sapiens DMC1 protein. 30 8.4
BC125164-1|AAI25165.1| 340|Homo sapiens DMC1 dosage suppressor ... 30 8.4
BC125163-1|AAI25164.1| 340|Homo sapiens DMC1 dosage suppressor ... 30 8.4
AY520538-1|AAR89915.1| 340|Homo sapiens DMC1 dosage suppressor ... 30 8.4
AL022320-2|CAB45656.1| 340|Homo sapiens DMC1 dosage suppressor ... 30 8.4
>AB013341-1|BAA25914.1| 328|Homo sapiens Trad protein.
Length = 328
Score = 68.9 bits (161), Expect = 2e-11
Identities = 40/168 (23%), Positives = 82/168 (48%), Gaps = 5/168 (2%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALR 555
+ SLD +L+ G+ +TE+ G GSGKTQ+ L +A N A + VLY+D+ G +A R
Sbjct: 86 IGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVLYVDSNGGLTASR 145
Query: 554 IQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNLKNGEXXXXXXXXXX-----X 390
+ ++L+ +E A + RI + + + + +++++ + L+
Sbjct: 146 LLQLLQAKTQDEEEQAEALQRIQVVHAFDIFQMLDVLQELRGTVAQQVTGSSGTVKVVVV 205
Query: 389 XXLPSLMFQYLGEDNKLGLSLLNSFVNYSRFICKQLNIGIICINMQTR 246
+ +++ LG + GL+L+ + + + L + ++ N TR
Sbjct: 206 DSVTAVVSPLLGGQQREGLALMMQLARELKTLARDLGMAVVVTNHITR 253
>Y15572-1|CAA75681.1| 328|Homo sapiens R51H3 protein.
Length = 328
Score = 68.5 bits (160), Expect = 3e-11
Identities = 40/168 (23%), Positives = 82/168 (48%), Gaps = 5/168 (2%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALR 555
+ SLD +L+ G+ +TE+ G GSGKTQ+ L +A N A + VLY+D+ G +A R
Sbjct: 86 IGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVLYVDSNGGLTASR 145
Query: 554 IQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNLKNGEXXXXXXXXXX-----X 390
+ ++L+ +E A + RI + + + + +++++ + L+
Sbjct: 146 LLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQMLDVLQELRGTVAQQVTGSSGTVKVVVV 205
Query: 389 XXLPSLMFQYLGEDNKLGLSLLNSFVNYSRFICKQLNIGIICINMQTR 246
+ +++ LG + GL+L+ + + + L + ++ N TR
Sbjct: 206 DSVTAVVSPLLGGQQREGLALMMQLARELKTLARDLGMAVVVTNHITR 253
>BC014422-1|AAH14422.1| 328|Homo sapiens RAD51-like 3 (S.
cerevisiae) protein.
Length = 328
Score = 68.5 bits (160), Expect = 3e-11
Identities = 40/168 (23%), Positives = 82/168 (48%), Gaps = 5/168 (2%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALR 555
+ SLD +L+ G+ +TE+ G GSGKTQ+ L +A N A + VLY+D+ G +A R
Sbjct: 86 IGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVLYVDSNGGLTASR 145
Query: 554 IQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNLKNGEXXXXXXXXXX-----X 390
+ ++L+ +E A + RI + + + + +++++ + L+
Sbjct: 146 LLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQMLDVLQELRGTVAQQVTGSSGTVKVVVV 205
Query: 389 XXLPSLMFQYLGEDNKLGLSLLNSFVNYSRFICKQLNIGIICINMQTR 246
+ +++ LG + GL+L+ + + + L + ++ N TR
Sbjct: 206 DSVTAVVSPLLGGQQREGLALMMQLARELKTLARDLGMAVVVTNHITR 253
>AY623116-1|AAT38112.1| 328|Homo sapiens RAD51-like 3 (S.
cerevisiae) protein.
Length = 328
Score = 68.5 bits (160), Expect = 3e-11
Identities = 40/168 (23%), Positives = 82/168 (48%), Gaps = 5/168 (2%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALR 555
+ SLD +L+ G+ +TE+ G GSGKTQ+ L +A N A + VLY+D+ G +A R
Sbjct: 86 IGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVLYVDSNGGLTASR 145
Query: 554 IQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNLKNGEXXXXXXXXXX-----X 390
+ ++L+ +E A + RI + + + + +++++ + L+
Sbjct: 146 LLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQMLDVLQELRGTVAQQVTGSSGTVKVVVV 205
Query: 389 XXLPSLMFQYLGEDNKLGLSLLNSFVNYSRFICKQLNIGIICINMQTR 246
+ +++ LG + GL+L+ + + + L + ++ N TR
Sbjct: 206 DSVTAVVSPLLGGQQREGLALMMQLARELKTLARDLGMAVVVTNHITR 253
>AF034956-1|AAC39719.1| 289|Homo sapiens RAD51D protein.
Length = 289
Score = 66.9 bits (156), Expect = 8e-11
Identities = 40/169 (23%), Positives = 81/169 (47%), Gaps = 5/169 (2%)
Frame = -3
Query: 737 SVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSAL 558
S LD +L+ G+ +TE+ G GSGKTQ+ L +A N A + VLY+D+ G +A
Sbjct: 46 SYKXLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVLYVDSNGGLTAS 105
Query: 557 RIQKILEKCQYSFKEVAAIMSRIHISYIWTMEELVNLFKNLKNGEXXXXXXXXXX----- 393
R+ ++L+ +E A + RI + + + + +++++ + L+
Sbjct: 106 RLLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQMLDVLQELRGTVAQQVTGSSGTVKVVV 165
Query: 392 XXXLPSLMFQYLGEDNKLGLSLLNSFVNYSRFICKQLNIGIICINMQTR 246
+ +++ LG + GL+L+ + + + L + ++ N TR
Sbjct: 166 VDSVTAVVSPLLGGQQREGLALMMQLARELKTLARDLGMAVVVTNHITR 214
>BC107753-1|AAI07754.1| 376|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 376
Score = 52.8 bits (121), Expect = 1e-06
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAIN-----CAKETHKTVLYIDTKGDF 567
S+LD++L G+P TE+CG G GKTQL +Q+A++ C ++IDT+G F
Sbjct: 105 SALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSF 164
Query: 566 SALRIQKILEKC 531
R+ + C
Sbjct: 165 MVDRVVDLATAC 176
>AY623112-1|AAT38108.1| 376|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 376
Score = 52.8 bits (121), Expect = 1e-06
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAIN-----CAKETHKTVLYIDTKGDF 567
S+LD++L G+P TE+CG G GKTQL +Q+A++ C ++IDT+G F
Sbjct: 105 SALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSF 164
Query: 566 SALRIQKILEKC 531
R+ + C
Sbjct: 165 MVDRVVDLATAC 176
>AF029669-1|AAC39604.1| 376|Homo sapiens Rad51C protein.
Length = 376
Score = 52.8 bits (121), Expect = 1e-06
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAIN-----CAKETHKTVLYIDTKGDF 567
S+LD++L G+P TE+CG G GKTQL +Q+A++ C ++IDT+G F
Sbjct: 105 SALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSF 164
Query: 566 SALRIQKILEKC 531
R+ + C
Sbjct: 165 MVDRVVDLATAC 176
>Y15571-1|CAA75680.1| 350|Homo sapiens R51H2 protein.
Length = 350
Score = 49.2 bits (112), Expect = 2e-05
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Frame = -3
Query: 737 SVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKG 573
++S+LD L+ G+ ++TE+ G G GKTQ + ++I T+ V+YIDT+
Sbjct: 86 TLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTES 145
Query: 572 DFSALRIQKILEK--CQYSFKEVAAIM--SRIHISYIWTMEELVNLFKNLK 432
FSA R+ +I E +Y E ++ S++H+ T +E++ ++L+
Sbjct: 146 AFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLE 196
>U92074-1|AAB63358.1| 350|Homo sapiens RecA-like protein protein.
Length = 350
Score = 49.2 bits (112), Expect = 2e-05
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Frame = -3
Query: 737 SVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKG 573
++S+LD L+ G+ ++TE+ G G GKTQ + ++I T+ V+YIDT+
Sbjct: 86 TLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTES 145
Query: 572 DFSALRIQKILEK--CQYSFKEVAAIM--SRIHISYIWTMEELVNLFKNLK 432
FSA R+ +I E +Y E ++ S++H+ T +E++ ++L+
Sbjct: 146 AFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLE 196
>U84138-1|AAC39723.1| 350|Homo sapiens DNA repair protein RAD51B
protein.
Length = 350
Score = 49.2 bits (112), Expect = 2e-05
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Frame = -3
Query: 737 SVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKG 573
++S+LD L+ G+ ++TE+ G G GKTQ + ++I T+ V+YIDT+
Sbjct: 86 TLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTES 145
Query: 572 DFSALRIQKILEK--CQYSFKEVAAIM--SRIHISYIWTMEELVNLFKNLK 432
FSA R+ +I E +Y E ++ S++H+ T +E++ ++L+
Sbjct: 146 AFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLE 196
>DQ160197-1|AAZ85144.1| 350|Homo sapiens RAD51-like 1 (S.
cerevisiae) protein.
Length = 350
Score = 49.2 bits (112), Expect = 2e-05
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Frame = -3
Query: 737 SVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKG 573
++S+LD L+ G+ ++TE+ G G GKTQ + ++I T+ V+YIDT+
Sbjct: 86 TLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTES 145
Query: 572 DFSALRIQKILEK--CQYSFKEVAAIM--SRIHISYIWTMEELVNLFKNLK 432
FSA R+ +I E +Y E ++ S++H+ T +E++ ++L+
Sbjct: 146 AFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLE 196
>CR536560-1|CAG38797.1| 350|Homo sapiens RAD51L1 protein.
Length = 350
Score = 49.2 bits (112), Expect = 2e-05
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Frame = -3
Query: 737 SVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKG 573
++S+LD L+ G+ ++TE+ G G GKTQ + ++I T+ V+YIDT+
Sbjct: 86 TLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTES 145
Query: 572 DFSALRIQKILEK--CQYSFKEVAAIM--SRIHISYIWTMEELVNLFKNLK 432
FSA R+ +I E +Y E ++ S++H+ T +E++ ++L+
Sbjct: 146 AFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLE 196
>BC030219-1|AAH30219.1| 384|Homo sapiens RAD51-like 1 (S.
cerevisiae) protein.
Length = 384
Score = 49.2 bits (112), Expect = 2e-05
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Frame = -3
Query: 737 SVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKG 573
++S+LD L+ G+ ++TE+ G G GKTQ + ++I T+ V+YIDT+
Sbjct: 86 TLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTES 145
Query: 572 DFSALRIQKILEK--CQYSFKEVAAIM--SRIHISYIWTMEELVNLFKNLK 432
FSA R+ +I E +Y E ++ S++H+ T +E++ ++L+
Sbjct: 146 AFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLE 196
>BT019705-1|AAV38511.1| 339|Homo sapiens RAD51 homolog (RecA
homolog, E. coli) (S. cerevisiae) protein.
Length = 339
Score = 43.2 bits (97), Expect = 0.001
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINC-----AKETHKTVLYIDTKGDFSA 561
LD +L GI +ITE+ G +GKTQ+ +A+ C E +YIDT+G F
Sbjct: 109 LDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGEGEGKAMYIDTEGTFRP 168
Query: 560 LRIQKILEKCQYSFKEV 510
R+ + E+ S +V
Sbjct: 169 ERLLAVAERYGLSGSDV 185
>D14134-1|BAA03189.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 42.3 bits (95), Expect = 0.002
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDFSA 561
LD +L GI +ITE+ G +GKTQ+ +A+ C + +YIDT+G F
Sbjct: 109 LDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRP 168
Query: 560 LRIQKILEKCQYSFKEV 510
R+ + E+ S +V
Sbjct: 169 ERLLAVAERYGLSGSDV 185
>D13804-1|BAA02962.1| 339|Homo sapiens HsRad51 protein.
Length = 339
Score = 42.3 bits (95), Expect = 0.002
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDFSA 561
LD +L GI +ITE+ G +GKTQ+ +A+ C + +YIDT+G F
Sbjct: 109 LDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRP 168
Query: 560 LRIQKILEKCQYSFKEV 510
R+ + E+ S +V
Sbjct: 169 ERLLAVAERYGLSGSDV 185
>CR536559-1|CAG38796.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 42.3 bits (95), Expect = 0.002
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDFSA 561
LD +L GI +ITE+ G +GKTQ+ +A+ C + +YIDT+G F
Sbjct: 109 LDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRP 168
Query: 560 LRIQKILEKCQYSFKEV 510
R+ + E+ S +V
Sbjct: 169 ERLLAVAERYGLSGSDV 185
>AY196785-1|AAN87149.1| 339|Homo sapiens RAD51 homolog (RecA
homolog, E. coli) (S. cerevisiae) protein.
Length = 339
Score = 42.3 bits (95), Expect = 0.002
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDFSA 561
LD +L GI +ITE+ G +GKTQ+ +A+ C + +YIDT+G F
Sbjct: 109 LDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRP 168
Query: 560 LRIQKILEKCQYSFKEV 510
R+ + E+ S +V
Sbjct: 169 ERLLAVAERYGLSGSDV 185
>AF233744-1|AAF69145.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 42.3 bits (95), Expect = 0.002
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDFSA 561
LD +L GI +ITE+ G +GKTQ+ +A+ C + +YIDT+G F
Sbjct: 109 LDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRP 168
Query: 560 LRIQKILEKCQYSFKEV 510
R+ + E+ S +V
Sbjct: 169 ERLLAVAERYGLSGSDV 185
>AF165094-1|AAD49705.1| 339|Homo sapiens Rad51 protein.
Length = 339
Score = 42.3 bits (95), Expect = 0.002
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDFSA 561
LD +L GI +ITE+ G +GKTQ+ +A+ C + +YIDT+G F
Sbjct: 109 LDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRP 168
Query: 560 LRIQKILEKCQYSFKEV 510
R+ + E+ S +V
Sbjct: 169 ERLLAVAERYGLSGSDV 185
>BT007417-1|AAP36085.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 41.1 bits (92), Expect = 0.004
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQ--IAINCAKE---THKTVLYIDTKGDFSA 561
LD +L G+P ITEL G + +GKTQLALQ +A+ ++ +YI T+ F
Sbjct: 89 LDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYICTEDAFPH 148
Query: 560 LRIQKIL 540
R+Q+++
Sbjct: 149 KRLQQLM 155
>BC011725-1|AAH11725.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 41.1 bits (92), Expect = 0.004
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQ--IAINCAKE---THKTVLYIDTKGDFSA 561
LD +L G+P ITEL G + +GKTQLALQ +A+ ++ +YI T+ F
Sbjct: 89 LDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYICTEDAFPH 148
Query: 560 LRIQKIL 540
R+Q+++
Sbjct: 149 KRLQQLM 155
>BC001036-1|AAH01036.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 41.1 bits (92), Expect = 0.004
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQ--IAINCAKE---THKTVLYIDTKGDFSA 561
LD +L G+P ITEL G + +GKTQLALQ +A+ ++ +YI T+ F
Sbjct: 89 LDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYICTEDAFPH 148
Query: 560 LRIQKIL 540
R+Q+++
Sbjct: 149 KRLQQLM 155
>AF508041-1|AAM23015.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 41.1 bits (92), Expect = 0.004
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQ--IAINCAKE---THKTVLYIDTKGDFSA 561
LD +L G+P ITEL G + +GKTQLALQ +A+ ++ +YI T+ F
Sbjct: 89 LDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYICTEDAFPH 148
Query: 560 LRIQKIL 540
R+Q+++
Sbjct: 149 KRLQQLM 155
>AF037222-1|AAC04805.1| 346|Homo sapiens XRCC3 protein.
Length = 346
Score = 41.1 bits (92), Expect = 0.004
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQ--IAINCAKE---THKTVLYIDTKGDFSA 561
LD +L G+P ITEL G + +GKTQLALQ +A+ ++ +YI T+ F
Sbjct: 89 LDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYICTEDAFPH 148
Query: 560 LRIQKIL 540
R+Q+++
Sbjct: 149 KRLQQLM 155
>AF035586-1|AAC05368.1| 346|Homo sapiens X-ray repair
cross-complementing protein 3 protein.
Length = 346
Score = 41.1 bits (92), Expect = 0.004
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQ--IAINCAKE---THKTVLYIDTKGDFSA 561
LD +L G+P ITEL G + +GKTQLALQ +A+ ++ +YI T+ F
Sbjct: 89 LDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYICTEDAFPH 148
Query: 560 LRIQKIL 540
R+Q+++
Sbjct: 149 KRLQQLM 155
>BT007339-1|AAP36003.1| 134|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 134
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQL 642
S+LD++L G+P TE+CG G GKTQL
Sbjct: 105 SALDDILGGGVPLMKTTEICGAPGVGKTQL 134
>BC101485-1|AAI01486.1| 134|Homo sapiens RAD51C protein protein.
Length = 134
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQL 642
S+LD++L G+P TE+CG G GKTQL
Sbjct: 105 SALDDILGGGVPLMKTTEICGAPGVGKTQL 134
>BC093930-1|AAH93930.1| 134|Homo sapiens RAD51C protein protein.
Length = 134
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQL 642
S+LD++L G+P TE+CG G GKTQL
Sbjct: 105 SALDDILGGGVPLMKTTEICGAPGVGKTQL 134
>BC000667-1|AAH00667.1| 134|Homo sapiens RAD51C protein protein.
Length = 134
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQL 642
S+LD++L G+P TE+CG G GKTQL
Sbjct: 105 SALDDILGGGVPLMKTTEICGAPGVGKTQL 134
>AF029670-1|AAC39605.1| 135|Homo sapiens Rad51C truncated protein
protein.
Length = 135
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3
Query: 731 SSLDNMLNRGIPAKTITELCGIAGSGKTQL 642
S+LD++L G+P TE+CG G GKTQL
Sbjct: 105 SALDDILGGGVPLMKTTEICGAPGVGKTQL 134
>AK131299-1|BAD18467.1| 340|Homo sapiens protein ( Homo sapiens
cDNA FLJ16262 fis, clone IMR322008651, highly similar
to DNA REPAIR PROTEIN RAD51. ).
Length = 340
Score = 36.7 bits (81), Expect = 0.096
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = -3
Query: 704 GIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDFSALRIQKIL 540
GI +ITE+ G +GKTQ+ +A+ C + +YIDT+G F R+ +
Sbjct: 117 GIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVA 176
Query: 539 EKCQYSFKEV 510
E+ S +V
Sbjct: 177 ERYGLSGSDV 186
>U93570-1|AAC51272.1| 338|Homo sapiens p40 protein.
Length = 338
Score = 33.9 bits (74), Expect = 0.68
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -3
Query: 266 CINMQTRW--VDQDLTDVEDEENSTAYKDSFTEKRYR----CLGRYWQHIPTLVLELEKI 105
C ++++R +++ ++ +EDE N + F EKR + L W ++ L L +
Sbjct: 104 CRSLRSRCDQLEERVSAMEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGV 163
Query: 104 KENDNENNSGIKITVLHSIDSDYEN 30
E+D EN + ++ T+ I ++ N
Sbjct: 164 PESDEENGTKLENTLQDIIQENFPN 188
>AF370457-1|AAP30718.1| 248|Homo sapiens ovarian epithelial
carcinoma-related protein protein.
Length = 248
Score = 33.5 bits (73), Expect = 0.90
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -3
Query: 266 CINMQTRW--VDQDLTDVEDEENSTAYKDSFTEKRYR----CLGRYWQHIPTLVLELEKI 105
C ++++R +++ ++ +EDE N + F EKR + L W ++ L L +
Sbjct: 14 CRSLRSRCDQLEERVSAMEDEMNEMKQEGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGV 73
Query: 104 KENDNENNSGIKITVLHSIDSDYEN 30
E+D EN + ++ T+ I ++ N
Sbjct: 74 PESDAENGTKLENTLQDIIQENFPN 98
>U93567-1|AAC51266.1| 338|Homo sapiens p40 protein.
Length = 338
Score = 33.1 bits (72), Expect = 1.2
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -3
Query: 266 CINMQTRW--VDQDLTDVEDEENSTAYKDSFTEKRYR----CLGRYWQHIPTLVLELEKI 105
C ++++R +++ ++ +EDE N + F EKR + L W ++ L L +
Sbjct: 104 CRSLRSRCDQLEERVSAMEDEMNEMKQEGKFREKRIKRNEQSLQEIWDYVKRPNLHLIGV 163
Query: 104 KENDNENNSGIKITVLHSIDSDYEN 30
E+D EN + ++ T+ I ++ N
Sbjct: 164 PESDVENGTKLENTLQDIIQENFPN 188
>U93574-1|AAC51278.1| 338|Homo sapiens p40 protein.
Length = 338
Score = 32.7 bits (71), Expect = 1.6
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -3
Query: 266 CINMQTRW--VDQDLTDVEDEENSTAYKDSFTEKRYR----CLGRYWQHIPTLVLELEKI 105
C ++++R +++ ++ +EDE N + F EKR + L W ++ L L +
Sbjct: 104 CRSLRSRCDQLEERVSAMEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGV 163
Query: 104 KENDNENNSGIKITVLHSIDSDYEN 30
E+D EN + ++ T+ I ++ N
Sbjct: 164 PESDVENGTKLENTLQDIIQENFPN 188
>U93573-1|AAC51277.1| 338|Homo sapiens p40 protein.
Length = 338
Score = 32.7 bits (71), Expect = 1.6
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -3
Query: 266 CINMQTRW--VDQDLTDVEDEENSTAYKDSFTEKRYR----CLGRYWQHIPTLVLELEKI 105
C ++++R +++ ++ +EDE N + F EKR + L W ++ L L +
Sbjct: 104 CRSLRSRCDQLEERVSAMEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGV 163
Query: 104 KENDNENNSGIKITVLHSIDSDYEN 30
E+D EN + ++ T+ I ++ N
Sbjct: 164 PESDVENGTKLENTLQDIIQENFPN 188
>U93572-1|AAC51275.1| 338|Homo sapiens p40 protein.
Length = 338
Score = 32.7 bits (71), Expect = 1.6
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -3
Query: 266 CINMQTRW--VDQDLTDVEDEENSTAYKDSFTEKRYR----CLGRYWQHIPTLVLELEKI 105
C ++++R +++ ++ +EDE N + F EKR + L W ++ L L +
Sbjct: 104 CRSLRSRCDQLEERVSAMEDEMNEMKREGKFREKRIKRNEQTLQEIWDYVKRPNLRLIGV 163
Query: 104 KENDNENNSGIKITVLHSIDSDYEN 30
E+D EN + ++ T+ I ++ N
Sbjct: 164 PESDVENGTKLENTLQDIIQENFPN 188
>U93569-1|AAC51270.1| 338|Homo sapiens p40 protein.
Length = 338
Score = 32.7 bits (71), Expect = 1.6
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -3
Query: 266 CINMQTRW--VDQDLTDVEDEENSTAYKDSFTEKRYR----CLGRYWQHIPTLVLELEKI 105
C ++++R +++ ++ +EDE N + F EKR + L W ++ L L +
Sbjct: 104 CRSLRSRCDQLEERVSAMEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGV 163
Query: 104 KENDNENNSGIKITVLHSIDSDYEN 30
E+D EN + ++ T+ I ++ N
Sbjct: 164 PESDVENGTKLENTLQDIIQENFPN 188
>U93568-1|AAC51268.1| 338|Homo sapiens p40 protein.
Length = 338
Score = 32.7 bits (71), Expect = 1.6
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -3
Query: 266 CINMQTRW--VDQDLTDVEDEENSTAYKDSFTEKRYR----CLGRYWQHIPTLVLELEKI 105
C ++++R +++ ++ +EDE N + F EKR + L W ++ L L +
Sbjct: 104 CRSLRSRCDQLEERVSAMEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGV 163
Query: 104 KENDNENNSGIKITVLHSIDSDYEN 30
E+D EN + ++ T+ I ++ N
Sbjct: 164 PESDVENGTKLENTLQDIIQENFPN 188
>U93566-1|AAC51265.1| 338|Homo sapiens p40 protein.
Length = 338
Score = 32.7 bits (71), Expect = 1.6
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -3
Query: 266 CINMQTRW--VDQDLTDVEDEENSTAYKDSFTEKRYR----CLGRYWQHIPTLVLELEKI 105
C ++++R +++ ++ +EDE N + F EKR + L W ++ L L +
Sbjct: 104 CRSLRSRCDQLEERVSAMEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGV 163
Query: 104 KENDNENNSGIKITVLHSIDSDYEN 30
E+D EN + ++ T+ I ++ N
Sbjct: 164 PESDVENGTKLENTLQDIIQENFPN 188
>U93564-1|AAC51262.1| 338|Homo sapiens p40 protein.
Length = 338
Score = 32.7 bits (71), Expect = 1.6
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -3
Query: 266 CINMQTRW--VDQDLTDVEDEENSTAYKDSFTEKRYR----CLGRYWQHIPTLVLELEKI 105
C ++++R +++ ++ +EDE N + F EKR + L W ++ L L +
Sbjct: 104 CRSLRSRCDQLEERVSAMEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGV 163
Query: 104 KENDNENNSGIKITVLHSIDSDYEN 30
E+D EN + ++ T+ I ++ N
Sbjct: 164 PESDVENGTKLENTLQDIIQENFPN 188
>U09116-1|AAB60344.1| 338|Homo sapiens ORF1 protein.
Length = 338
Score = 32.7 bits (71), Expect = 1.6
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -3
Query: 266 CINMQTRW--VDQDLTDVEDEENSTAYKDSFTEKRYR----CLGRYWQHIPTLVLELEKI 105
C ++++R +++ ++ +EDE N + F EKR + L W ++ L L +
Sbjct: 104 CRSLRSRCDQLEERVSAMEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGV 163
Query: 104 KENDNENNSGIKITVLHSIDSDYEN 30
E+D EN + ++ T+ I ++ N
Sbjct: 164 PESDVENGTKLENTLQDIIQENFPN 188
>M80343-1|AAB59367.1| 338|Homo sapiens protein ( Human transposon
L1.2. ).
Length = 338
Score = 32.7 bits (71), Expect = 1.6
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -3
Query: 266 CINMQTRW--VDQDLTDVEDEENSTAYKDSFTEKRYR----CLGRYWQHIPTLVLELEKI 105
C ++++R +++ ++ +EDE N + F EKR + L W ++ L L +
Sbjct: 104 CRSLRSRCDQLEERVSAMEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGV 163
Query: 104 KENDNENNSGIKITVLHSIDSDYEN 30
E+D EN + ++ T+ I ++ N
Sbjct: 164 PESDVENGTKLENTLQDIIQENFPN 188
>M19503-1|AAA36590.1| 338|Homo sapiens protein ( Human Line-1
repeat mRNA with 2 open reading frames. ).
Length = 338
Score = 32.7 bits (71), Expect = 1.6
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = -3
Query: 263 INMQTRWVDQDLTDVEDEENSTAYKDSFTEKRYR----CLGRYWQHIPTLVLELEKIKEN 96
+ Q +++ ++ +EDE N + F EKR + L W ++ L L + E+
Sbjct: 107 LRSQCDQLEERVSAMEDEMNEMKQEGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVPES 166
Query: 95 DNENNSGIKITVLHSIDSDYEN 30
D EN + ++ T+ I + N
Sbjct: 167 DAENGTKLENTLQDIIQETFPN 188
>AF421375-2|AAL50636.1| 338|Homo sapiens unknown protein.
Length = 338
Score = 32.7 bits (71), Expect = 1.6
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -3
Query: 266 CINMQTRW--VDQDLTDVEDEENSTAYKDSFTEKRYR----CLGRYWQHIPTLVLELEKI 105
C ++++R +++ ++ +EDE N + F EKR + L W ++ L L +
Sbjct: 104 CRSLRSRCDQLEERVSAMEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGV 163
Query: 104 KENDNENNSGIKITVLHSIDSDYEN 30
E+D EN + ++ T+ I ++ N
Sbjct: 164 PESDVENGTKLENTLQDIIQENFPN 188
>AF149422-1|AAD38784.1| 338|Homo sapiens unknown protein.
Length = 338
Score = 32.7 bits (71), Expect = 1.6
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -3
Query: 266 CINMQTRW--VDQDLTDVEDEENSTAYKDSFTEKRYR----CLGRYWQHIPTLVLELEKI 105
C ++++R +++ ++ +EDE N + F EKR + L W ++ L L +
Sbjct: 104 CRSLRSRCDQLEERVSAMEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGV 163
Query: 104 KENDNENNSGIKITVLHSIDSDYEN 30
E+D EN + ++ T+ I ++ N
Sbjct: 164 PESDVENGTKLENTLQDIIQENFPN 188
>AF148856-1|AAD39214.1| 338|Homo sapiens unknown protein.
Length = 338
Score = 32.7 bits (71), Expect = 1.6
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -3
Query: 266 CINMQTRW--VDQDLTDVEDEENSTAYKDSFTEKRYR----CLGRYWQHIPTLVLELEKI 105
C ++++R +++ ++ +EDE N + F EKR + L W ++ L L +
Sbjct: 104 CRSLRSRCDQLEERVSAMEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGV 163
Query: 104 KENDNENNSGIKITVLHSIDSDYEN 30
E+D EN + ++ T+ I ++ N
Sbjct: 164 PESDVENGTKLENTLQDIIQENFPN 188
>AB018360-1|BAA33779.1| 95|Homo sapiens TRAD-d4 protein.
Length = 95
Score = 32.7 bits (71), Expect = 1.6
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -3
Query: 734 VSSLDNMLNRGIPAKTITELCGIAGSGKTQ 645
+ SLD +L+ G+ +TE+ G GSGKTQ
Sbjct: 53 IGSLDKLLDAGLYTGEVTEIVGGPGSGKTQ 82
>AK125132-1|BAC86059.1| 220|Homo sapiens protein ( Homo sapiens
cDNA FLJ43142 fis, clone CTONG3007870. ).
Length = 220
Score = 30.7 bits (66), Expect = 6.3
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = -3
Query: 221 VEDEENSTAYKDSFTEKRYR----CLGRYWQHIPTLVLELEKIKENDNENNSGIKITVLH 54
+ED+ N ++ F EKR + L W ++ L L + E+D EN + ++ T+
Sbjct: 1 MEDQMNEMKCEEKFREKRIKRNEQSLQEIWDYVKRPNLRLIAVPESDGENGTKLENTLRD 60
Query: 53 SIDSDY 36
I ++
Sbjct: 61 IIQENF 66
>U93571-1|AAC51274.1| 337|Homo sapiens p40 protein.
Length = 337
Score = 30.3 bits (65), Expect = 8.4
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -3
Query: 266 CINMQTRW--VDQDLTDVEDEENSTAYKDSFTEKRYR----CLGRYWQHIPTLVLELEKI 105
C ++++R +++ ++ +EDE N + F EKR + L W ++ L L +
Sbjct: 104 CRSLRSRCDQLEERVSAMEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLHLIGV 163
Query: 104 KENDNENNSGIKITVLHSIDSDYEN 30
E+D EN + ++ T L I ++ N
Sbjct: 164 PESDVENGTKLENT-LQDIIQNFPN 187
>D64108-1|BAA10970.1| 340|Homo sapiens DMC1 homologue protein.
Length = 340
Score = 30.3 bits (65), Expect = 8.4
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = -3
Query: 722 DNMLNRGIPAKTITELCGIAGSGKTQLALQIAI-----NCAKETHKTVLYIDTKGDFSAL 558
D +L GI + ITE G +GKTQL+ + + +++IDT+ F
Sbjct: 109 DKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPD 168
Query: 557 RIQKILEK 534
R++ I ++
Sbjct: 169 RLRDIADR 176
>D63882-1|BAA09932.1| 340|Homo sapiens HsLim15 protein.
Length = 340
Score = 30.3 bits (65), Expect = 8.4
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = -3
Query: 722 DNMLNRGIPAKTITELCGIAGSGKTQLALQIAI-----NCAKETHKTVLYIDTKGDFSAL 558
D +L GI + ITE G +GKTQL+ + + +++IDT+ F
Sbjct: 109 DKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPD 168
Query: 557 RIQKILEK 534
R++ I ++
Sbjct: 169 RLRDIADR 176
>CR456486-1|CAG30372.1| 340|Homo sapiens DMC1 protein.
Length = 340
Score = 30.3 bits (65), Expect = 8.4
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = -3
Query: 722 DNMLNRGIPAKTITELCGIAGSGKTQLALQIAI-----NCAKETHKTVLYIDTKGDFSAL 558
D +L GI + ITE G +GKTQL+ + + +++IDT+ F
Sbjct: 109 DKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPD 168
Query: 557 RIQKILEK 534
R++ I ++
Sbjct: 169 RLRDIADR 176
>BC125164-1|AAI25165.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 30.3 bits (65), Expect = 8.4
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = -3
Query: 722 DNMLNRGIPAKTITELCGIAGSGKTQLALQIAI-----NCAKETHKTVLYIDTKGDFSAL 558
D +L GI + ITE G +GKTQL+ + + +++IDT+ F
Sbjct: 109 DKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPD 168
Query: 557 RIQKILEK 534
R++ I ++
Sbjct: 169 RLRDIADR 176
>BC125163-1|AAI25164.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 30.3 bits (65), Expect = 8.4
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = -3
Query: 722 DNMLNRGIPAKTITELCGIAGSGKTQLALQIAI-----NCAKETHKTVLYIDTKGDFSAL 558
D +L GI + ITE G +GKTQL+ + + +++IDT+ F
Sbjct: 109 DKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPD 168
Query: 557 RIQKILEK 534
R++ I ++
Sbjct: 169 RLRDIADR 176
>AY520538-1|AAR89915.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 30.3 bits (65), Expect = 8.4
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = -3
Query: 722 DNMLNRGIPAKTITELCGIAGSGKTQLALQIAI-----NCAKETHKTVLYIDTKGDFSAL 558
D +L GI + ITE G +GKTQL+ + + +++IDT+ F
Sbjct: 109 DKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPD 168
Query: 557 RIQKILEK 534
R++ I ++
Sbjct: 169 RLRDIADR 176
>AL022320-2|CAB45656.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 30.3 bits (65), Expect = 8.4
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = -3
Query: 722 DNMLNRGIPAKTITELCGIAGSGKTQLALQIAI-----NCAKETHKTVLYIDTKGDFSAL 558
D +L GI + ITE G +GKTQL+ + + +++IDT+ F
Sbjct: 109 DKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPD 168
Query: 557 RIQKILEK 534
R++ I ++
Sbjct: 169 RLRDIADR 176
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,185,185
Number of Sequences: 237096
Number of extensions: 2331818
Number of successful extensions: 7607
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 7493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7571
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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