Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e14r
(796 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069531-1|AAC42663.1| 341|Drosophila melanogaster spindle B pr... 52 1e-06
AE014297-1844|AAF55050.1| 341|Drosophila melanogaster CG3325-PA... 52 1e-06
AE013599-813|AAF58973.1| 184|Drosophila melanogaster CG2412-PA ... 51 2e-06
AY070920-1|AAL48542.1| 341|Drosophila melanogaster RE02671p pro... 50 3e-06
L41342-1|AAA64873.1| 336|Drosophila melanogaster protein ( Dros... 41 0.002
D37788-1|BAA07039.1| 336|Drosophila melanogaster RecA protein h... 41 0.002
D17726-1|BAA04580.1| 336|Drosophila melanogaster Rad51 protein. 41 0.002
BT001791-1|AAN71546.1| 284|Drosophila melanogaster RH24133p pro... 41 0.002
AE014297-4533|AAN14213.1| 279|Drosophila melanogaster CG7948-PB... 41 0.002
AE014297-4532|AAF57005.1| 336|Drosophila melanogaster CG7948-PA... 41 0.002
AY257540-1|AAP13056.1| 270|Drosophila melanogaster spindle D pr... 41 0.002
AY071162-1|AAL48784.1| 270|Drosophila melanogaster RE19845p pro... 41 0.002
AE014297-4083|AAN14399.1| 270|Drosophila melanogaster CG31069-P... 41 0.002
AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC... 30 3.2
>AF069531-1|AAC42663.1| 341|Drosophila melanogaster spindle B
protein.
Length = 341
Score = 51.6 bits (118), Expect = 1e-06
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Frame = -3
Query: 746 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIA--INCAKE---THKTVLYID 582
+ + S+LD G+ + ITELCG AG GKTQL LQ++ + +E K V YI
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYIC 147
Query: 581 TKGDFSALRIQKILEKCQYSFKEV 510
T+ F A R+ ++ + C+ E+
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEM 171
>AE014297-1844|AAF55050.1| 341|Drosophila melanogaster CG3325-PA
protein.
Length = 341
Score = 51.6 bits (118), Expect = 1e-06
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Frame = -3
Query: 746 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIA--INCAKE---THKTVLYID 582
+ + S+LD G+ + ITELCG AG GKTQL LQ++ + +E K V YI
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYIC 147
Query: 581 TKGDFSALRIQKILEKCQYSFKEV 510
T+ F A R+ ++ + C+ E+
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEM 171
>AE013599-813|AAF58973.1| 184|Drosophila melanogaster CG2412-PA
protein.
Length = 184
Score = 51.2 bits (117), Expect = 2e-06
Identities = 29/83 (34%), Positives = 44/83 (53%)
Frame = -3
Query: 686 ITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSALRIQKILEKCQYSFKEVA 507
+ ELCG G GKTQL +A+N + + VL+IDTK +FS RIQ +L + +
Sbjct: 23 VWELCGQPGVGKTQLLYTLALNFVWKHSQAVLFIDTKREFSCKRIQDMLRAREVDEEASE 82
Query: 506 AIMSRIHISYIWTMEELVNLFKN 438
M I + T ++ +L K+
Sbjct: 83 RAMKGIRVVQAATGADINDLLKS 105
>AY070920-1|AAL48542.1| 341|Drosophila melanogaster RE02671p
protein.
Length = 341
Score = 50.4 bits (115), Expect = 3e-06
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Frame = -3
Query: 746 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGKTQLALQIA--INCAKE---THKTVLYID 582
+ + S+LD G+ + ITELCG AG GKT+L LQ++ + +E K V YI
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTELLLQLSLCVQLPRELGGLGKGVAYIC 147
Query: 581 TKGDFSALRIQKILEKCQYSFKEV 510
T+ F A R+ ++ + C+ E+
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEM 171
>L41342-1|AAA64873.1| 336|Drosophila melanogaster protein (
Drosophila melanogaster(clone pDmR2210) RAD51 homolog
gene, complete cds. ).
Length = 336
Score = 41.1 bits (92), Expect = 0.002
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINC-----AKETHKTVLYIDTKGDFSA 561
LD +L GI +ITE+ G GKTQL +A+ C K +YIDT+ F
Sbjct: 106 LDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRP 165
Query: 560 LRIQKILEKCQYSFKEV 510
R+ I ++ + + EV
Sbjct: 166 ERLAAIAQRYKLNESEV 182
>D37788-1|BAA07039.1| 336|Drosophila melanogaster RecA protein
homologue protein.
Length = 336
Score = 41.1 bits (92), Expect = 0.002
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINC-----AKETHKTVLYIDTKGDFSA 561
LD +L GI +ITE+ G GKTQL +A+ C K +YIDT+ F
Sbjct: 106 LDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRP 165
Query: 560 LRIQKILEKCQYSFKEV 510
R+ I ++ + + EV
Sbjct: 166 ERLAAIAQRYKLNESEV 182
>D17726-1|BAA04580.1| 336|Drosophila melanogaster Rad51 protein.
Length = 336
Score = 41.1 bits (92), Expect = 0.002
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINC-----AKETHKTVLYIDTKGDFSA 561
LD +L GI +ITE+ G GKTQL +A+ C K +YIDT+ F
Sbjct: 106 LDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRP 165
Query: 560 LRIQKILEKCQYSFKEV 510
R+ I ++ + + EV
Sbjct: 166 ERLAAIAQRYKLNESEV 182
>BT001791-1|AAN71546.1| 284|Drosophila melanogaster RH24133p
protein.
Length = 284
Score = 41.1 bits (92), Expect = 0.002
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINC-----AKETHKTVLYIDTKGDFSA 561
LD +L GI +ITE+ G GKTQL +A+ C K +YIDT+ F
Sbjct: 49 LDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRP 108
Query: 560 LRIQKILEKCQYSFKEV 510
R+ I ++ + + EV
Sbjct: 109 ERLAAIAQRYKLNESEV 125
>AE014297-4533|AAN14213.1| 279|Drosophila melanogaster CG7948-PB,
isoform B protein.
Length = 279
Score = 41.1 bits (92), Expect = 0.002
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINC-----AKETHKTVLYIDTKGDFSA 561
LD +L GI +ITE+ G GKTQL +A+ C K +YIDT+ F
Sbjct: 49 LDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRP 108
Query: 560 LRIQKILEKCQYSFKEV 510
R+ I ++ + + EV
Sbjct: 109 ERLAAIAQRYKLNESEV 125
>AE014297-4532|AAF57005.1| 336|Drosophila melanogaster CG7948-PA,
isoform A protein.
Length = 336
Score = 41.1 bits (92), Expect = 0.002
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = -3
Query: 725 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINC-----AKETHKTVLYIDTKGDFSA 561
LD +L GI +ITE+ G GKTQL +A+ C K +YIDT+ F
Sbjct: 106 LDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRP 165
Query: 560 LRIQKILEKCQYSFKEV 510
R+ I ++ + + EV
Sbjct: 166 ERLAAIAQRYKLNESEV 182
>AY257540-1|AAP13056.1| 270|Drosophila melanogaster spindle D
protein.
Length = 270
Score = 40.7 bits (91), Expect = 0.002
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAIN-----CAKETHKTVLYIDTKGDFS 564
+LD GI + EL G +G+GKTQ+ LQ+ +N A + L+IDT+ DF
Sbjct: 52 ALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFIDTRQDFH 111
Query: 563 ALRIQKILEKCQYSF 519
R+ + K + +
Sbjct: 112 PDRLMGLALKLERQY 126
>AY071162-1|AAL48784.1| 270|Drosophila melanogaster RE19845p
protein.
Length = 270
Score = 40.7 bits (91), Expect = 0.002
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAIN-----CAKETHKTVLYIDTKGDFS 564
+LD GI + EL G +G+GKTQ+ LQ+ +N A + L+IDT+ DF
Sbjct: 52 ALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFIDTRQDFH 111
Query: 563 ALRIQKILEKCQYSF 519
R+ + K + +
Sbjct: 112 PDRLMGLALKLERQY 126
>AE014297-4083|AAN14399.1| 270|Drosophila melanogaster CG31069-PA
protein.
Length = 270
Score = 40.7 bits (91), Expect = 0.002
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Frame = -3
Query: 728 SLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAIN-----CAKETHKTVLYIDTKGDFS 564
+LD GI + EL G +G+GKTQ+ LQ+ +N A + L+IDT+ DF
Sbjct: 52 ALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFIDTRQDFH 111
Query: 563 ALRIQKILEKCQYSF 519
R+ + K + +
Sbjct: 112 PDRLMGLALKLERQY 126
>AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC
protein.
Length = 4699
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 305 SRFICKQLNIGIICINMQTRWV-DQDLTDVEDEENSTAYKDSFTEKRYRCLGRYWQ 141
++F C N CIN Q + D D D DE N T + D F+ +C+ W+
Sbjct: 3690 NQFKCAAFNT---CINKQYKCDGDDDCPDGSDEVNCTCHSDHFSCGNGKCIMSRWK 3742
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,682,229
Number of Sequences: 53049
Number of extensions: 693521
Number of successful extensions: 1640
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1634
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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