Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10e14f
         (636 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070920-1|AAL48542.1|  341|Drosophila melanogaster RE02671p pro...    33   0.32 
AF069531-1|AAC42663.1|  341|Drosophila melanogaster spindle B pr...    33   0.32 
AE014297-1844|AAF55050.1|  341|Drosophila melanogaster CG3325-PA...    33   0.32 
AE014296-331|AAF47547.2|  685|Drosophila melanogaster CG13930-PA...    28   9.2  

>AY070920-1|AAL48542.1|  341|Drosophila melanogaster RE02671p
           protein.
          Length = 341

 Score = 33.1 bits (72), Expect = 0.32
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 527 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGK 622
           + +  S+LD     G+  + ITELCG AG GK
Sbjct: 88  VSFGCSALDRCTGGGVVTRGITELCGAAGVGK 119


>AF069531-1|AAC42663.1|  341|Drosophila melanogaster spindle B
           protein.
          Length = 341

 Score = 33.1 bits (72), Expect = 0.32
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 527 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGK 622
           + +  S+LD     G+  + ITELCG AG GK
Sbjct: 88  VSFGCSALDRCTGGGVVTRGITELCGAAGVGK 119


>AE014297-1844|AAF55050.1|  341|Drosophila melanogaster CG3325-PA
           protein.
          Length = 341

 Score = 33.1 bits (72), Expect = 0.32
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 527 MEYSVSSLDNMLNRGIPAKTITELCGIAGSGK 622
           + +  S+LD     G+  + ITELCG AG GK
Sbjct: 88  VSFGCSALDRCTGGGVVTRGITELCGAAGVGK 119


>AE014296-331|AAF47547.2|  685|Drosophila melanogaster CG13930-PA
           protein.
          Length = 685

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 352 TCGKAYCQPVWAIIIILPISVTLQ 423
           TCG  +C  +W   I+LPI VTLQ
Sbjct: 537 TCGSDWCIRIWLAGILLPI-VTLQ 559


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,926,987
Number of Sequences: 53049
Number of extensions: 530695
Number of successful extensions: 1245
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)