Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10e13r
         (758 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   4.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   4.1  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   5.4  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   7.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.5  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -2

Query: 271 GVSKIFQEPAPGIVKNDQVVVSRAFQEAFVKVDEEGAT 158
           G+ +IF  PA   +K+D V + + F   F+++D    T
Sbjct: 515 GMMRIFLGPAFDEIKHDMVYLQKYFY-LFMEMDRFAVT 551


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -2

Query: 271 GVSKIFQEPAPGIVKNDQVVVSRAFQEAFVKVDEEGAT 158
           G+ +IF  PA   +K+D V + + F   F+++D    T
Sbjct: 515 GMMRIFLGPAFDEIKHDMVYLQKYFY-LFMEMDRFAVT 551


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +2

Query: 173 VDFHES-FLESSRDYNLVILNNARCWLLE 256
           +DFHES F+ES  ++ ++  N  +C  LE
Sbjct: 784 LDFHESGFMESLDNHWILRSNVQQCEQLE 812


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 605 VERNVPVPLEENDVKHCNGRGG 670
           +ERN  VP   N V +  G+GG
Sbjct: 86  IERNNGVPSSLNVVTNKKGKGG 107


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 364 NLSPAGRDIELEIPKFEIRSGLDL 293
           N+ P G  + +EIP+    S LD+
Sbjct: 169 NVVPEGARVPIEIPRDYTASDLDV 192


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,107
Number of Sequences: 438
Number of extensions: 3801
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)