Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10e13f
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    24   1.2  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      23   2.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.9  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   4.9  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   4.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   6.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   6.4  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 420 ICSEAKWTTLTLEIQRMPLISSTVGR 497
           +  ++KW   +  I+ MPL++  +GR
Sbjct: 413 LAEDSKWRVRSAIIEYMPLLAGQLGR 438


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +3

Query: 204 CCCFPCTSL-EPVHSPRKRSGKSLGEGRLKSH 296
           C C PCT + E    P++ +G +  EG L +H
Sbjct: 125 CMCRPCTGVEESAVIPQEIAGYA-DEGPLSNH 155


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +2

Query: 98  RTRLGDAIDKTSLKILKESYNLADDKNVIASPLGVMLLLSLYESGAG 238
           +  L  A+D     +L   +NL   K+ IA P    ++L L  +  G
Sbjct: 619 KINLKHALDLDRQGLLHRQFNLPPAKDTIAVPNNGYVVLRLRANNPG 665


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/34 (20%), Positives = 18/34 (52%)
 Frame = -2

Query: 582 MTLNIATAVAGSILSSLTGVFMCP*VCSSAQRLM 481
           M + I   +    +++ T +F+C  +C+  Q ++
Sbjct: 257 MIVYIIVVIFWYTVNASTNIFLCDEICNEGQTIL 290


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = -2

Query: 507 VCSSAQRLMISAAFFGSPKLM--LSTSLLNRFAVLENASANLYWSETYILLATVKNFG 340
           VCS  +  MI   FFG P +M  L +SL+    + E  + N  + +   +   V N G
Sbjct: 198 VCSIKELNMIFNEFFGWPIIMIILYSSLMVLNYIDEVFNNNFGYDKKQYIGVVVANVG 255


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/34 (20%), Positives = 18/34 (52%)
 Frame = -2

Query: 582 MTLNIATAVAGSILSSLTGVFMCP*VCSSAQRLM 481
           M + I   +    +++ T +F+C  +C+  Q ++
Sbjct: 257 MIVYIIVVIFWYTVNASTNIFLCDEICNEGQTIL 290


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/26 (23%), Positives = 15/26 (57%)
 Frame = +1

Query: 391 VGRRVLQDSESVQKRSGQH*LWRSKE 468
           +G ++  ++ + ++  G H +W S E
Sbjct: 358 IGVKIALEAATTEREGGYHDIWMSGE 383


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/26 (23%), Positives = 15/26 (57%)
 Frame = +1

Query: 391 VGRRVLQDSESVQKRSGQH*LWRSKE 468
           +G ++  ++ + ++  G H +W S E
Sbjct: 358 IGVKIALEAATTEREGGYHDIWMSGE 383


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,778
Number of Sequences: 336
Number of extensions: 3302
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)