Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e13f
(631 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 70 2e-12
01_01_1152 + 9170628-9171899 54 7e-08
11_02_0011 - 7337618-7338496,7338596-7338991 54 1e-07
11_02_0012 - 7346282-7347136,7347234-7347593 50 2e-06
11_01_0750 - 6315126-6315896,6316371-6316784 47 1e-05
11_01_0771 + 6453130-6454488 45 4e-05
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 43 2e-04
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 43 2e-04
11_02_0014 - 7352619-7352918,7353173-7353418 38 0.007
11_01_0767 + 6438648-6438809,6439146-6440000 38 0.009
05_06_0044 - 25150322-25151260 35 0.061
03_05_0294 + 22855503-22855946,22856346-22856399 34 0.11
06_01_0059 - 510856-511499,511595-511805 29 2.3
10_08_0355 - 17131178-17131268,17131376-17131429,17131521-171316... 28 5.3
09_02_0226 - 6007656-6008063,6012166-6012678 28 5.3
12_01_1053 - 10840558-10841085,10841363-10841528,10841571-108417... 28 7.0
07_03_1696 - 28779455-28779733,28779813-28780074,28780805-287809... 28 7.0
01_06_1263 + 35840502-35841308,35841763-35841969,35842272-358423... 28 7.0
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 28 7.0
10_08_1042 - 22515298-22515354,22515614-22515709,22515806-225159... 27 9.3
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686... 27 9.3
07_03_1481 + 26860051-26860104,26861114-26861143,26861714-26863174 27 9.3
01_01_0359 + 2829325-2832076,2832223-2832593,2833335-2833695,283... 27 9.3
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 69.7 bits (163), Expect = 2e-12
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Frame = +2
Query: 170 DKNVIASPLGVMLLLSLYESGAGAQSKEEIREILG--GGEAQESSHTYGLLNQRYAEFDP 343
DKN+ SPL + L+L +GA ++ ++I LG GG A + ++ L + P
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGP 90
Query: 344 ------KFLTVANKIYVSDQYKLADAFSRT-ANLFRSEVDNINFGDP-KNAADIINRWAD 499
+ AN ++V +L A++R A+ +R+E ++F D + A IN W +
Sbjct: 91 GDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 500 EQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASET 628
T G IK + +D +D AT + N ++F+G W F+A T
Sbjct: 151 SATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARST 193
>01_01_1152 + 9170628-9171899
Length = 423
Score = 54.4 bits (125), Expect = 7e-08
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Frame = +2
Query: 173 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGG---GEAQESSHTYGLLNQRYAEFDP 343
+N I SPL L+L GA +++ E+ LG E S T + R+ P
Sbjct: 59 RNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHL---P 115
Query: 344 KFLTVANKIYVSDQYKLADAFS-RTANLFRSEVDNINFG-DPKNAADIINRWADEQTQGH 517
+ A ++V L F+ A+ + + + +F P+ A + +N + + T+G
Sbjct: 116 N-TSFACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGL 174
Query: 518 IKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASET 628
I+ + + +D +T V + N + F+G W +PF+ S T
Sbjct: 175 IRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSAT 211
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 53.6 bits (123), Expect = 1e-07
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Frame = +2
Query: 161 LADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTY------GLLNQ 322
++ +KN++ SP + L+L +GA + +E+ +LG + + GL ++
Sbjct: 27 VSSNKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADE 86
Query: 323 RYAEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFG-DPKNAADIINRWA 496
A P+ ++ A ++ + +L A+ + A +++ NF PK + IN+W
Sbjct: 87 S-ASGGPR-VSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWV 144
Query: 497 DEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASET 628
+ T I + + + TA+ + N I+F+G W PF S T
Sbjct: 145 SKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSST 188
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 49.6 bits (113), Expect = 2e-06
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Frame = +2
Query: 143 LKESYNLADD-----KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTY 307
L+ + LADD +NV+ SP+ + L+L SGA + +E+ +LG + +
Sbjct: 16 LRLAKRLADDGDNSNRNVVFSPVSLYAALALVASGARGTTLDELVALLGAASLDDLEESV 75
Query: 308 ------GLLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTANLFRSEVDNINFGDPKN 469
GL ++ +E ++ A ++ ++ L A+ R A+ R PK+
Sbjct: 76 RRAVEVGLADE--SESGGPRVSYACGVWHDERLALKPAY-RAADFQRQ---------PKS 123
Query: 470 AADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASET 628
+ IN+W + T I+ + + + TA+ + N I+F+G W PF T
Sbjct: 124 SRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERT 176
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 46.8 bits (106), Expect = 1e-05
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Frame = +2
Query: 176 NVIASPLGVMLLLSLYESGAGAQSKEEIREILG------GGEAQE----SSHTYGLLNQR 325
N S V + L+L GA ++ ++ + LG GG A S +L R
Sbjct: 33 NAAVSAPAVHVSLALAAGGARGATRRQVLQALGCGGGGRGGAADAANVASRVVKRVLRDR 92
Query: 326 YAEFDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFGD-PKNAADIINRWAD 499
P+ L A ++ L+ F A N++ S +F + P++A D IN W
Sbjct: 93 STSGGPR-LAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVK 151
Query: 500 EQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHW 601
+ T+G + T + ID T + + + ++F+G W
Sbjct: 152 DSTKGTVTTLLPAGTIDQNTGLVLGSALYFRGRW 185
>11_01_0771 + 6453130-6454488
Length = 452
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +2
Query: 482 INRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETE 631
IN WA T I + + P TAV + N I+F+G W PFN S+TE
Sbjct: 177 INAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTE 226
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 173 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQE 292
+N+ SPL V LSL +GA + +EI +LG +
Sbjct: 37 RNLAFSPLSVHAALSLAAAGAAGGTLDEILAVLGAASRDD 76
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 473 ADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETE 631
A +N W D T G IK + +D T + + N ++F+G W F+AS+T+
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTK 58
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 455 GDPKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETE 631
G A +N W ++ T G IK + +D T + + N ++F+G W F+AS+T+
Sbjct: 208 GKAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTK 266
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 482 INRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETE 631
+N W D T G IK + I+ T + + N ++F+G W F+ S+TE
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTE 518
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 173 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTY 307
+NV SPL + + LSL +GAG +++++ LGG + E H +
Sbjct: 35 RNVAFSPLSLHVALSLVAAGAGGATRDQLASALGGPGSAEGLHAF 79
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 458 DPKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASET 628
+PK + IN W + T I + + + T + + N I+F+G W PF T
Sbjct: 82 EPKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPREST 138
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +2
Query: 371 YVSDQYKLADAF-SRTANLFRSEVDNINFGD-PKNAADIINRWADEQTQGHIKTPVSEDK 544
++ Y L A+ ++ ++F + P A IN W T+ I + +
Sbjct: 23 WLDASYSLKPAYRDAIVGTYKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPES 82
Query: 545 IDPATAVAMFNVIFFQGHWHVPFNASET 628
T + N I+F+G W PF+ S+T
Sbjct: 83 QSVDTRHVVGNAIYFKGEWLAPFDKSDT 110
>05_06_0044 - 25150322-25151260
Length = 312
Score = 34.7 bits (76), Expect = 0.061
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Frame = +2
Query: 368 IYVSDQYKLADAFSRTA-NLFRSEVDNINFGDPKNAADIINRWADEQTQGHIKTPVSEDK 544
++V +L AF+ TA ++F++ V + G+P A IN W QT G +K +S
Sbjct: 3 VWVDASLRLNPAFADTAASVFKAAVRSA--GNPAAARAEINEWFSSQTGGFVKDILSNSI 60
Query: 545 IDP-----------ATAVAMFNVIFFQGHWHVPFNASETE 631
D + +V + N ++F +W PF TE
Sbjct: 61 DDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLTE 100
>03_05_0294 + 22855503-22855946,22856346-22856399
Length = 165
Score = 33.9 bits (74), Expect = 0.11
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Frame = +2
Query: 164 ADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILG--GGEAQESSHTYG--LLNQRYA 331
A NV SPL + + LSL +GAG +++++ +LG G E H + ++ A
Sbjct: 41 AGGSNVAFSPLSLHVALSLVAAGAGGATRDQLVSLLGVPGRGTAEGLHAFAEQVVQLVLA 100
Query: 332 EFDP---KFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINF 454
+ P + A+ +++ L +F A +++E +++F
Sbjct: 101 DSSPAGGPRVAFADGVFIDSSLSLMKSFKDVAVGKYKAETHSVDF 145
>06_01_0059 - 510856-511499,511595-511805
Length = 284
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 203 MLLLSLYESGAGAQSKEEIREILGGGEAQESSHTYGLLNQRYAEFD-PKFLTVANKIYVS 379
+LL + GAG S ++ GGG +++H +G+ Q +A D LTV Y +
Sbjct: 197 LLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQVFAALDNSDGLTVKLTTYST 256
Query: 380 DQYKL--ADAFS 409
Q + +DA S
Sbjct: 257 PQQTIIVSDAIS 268
>10_08_0355 -
17131178-17131268,17131376-17131429,17131521-17131663,
17131812-17132096,17132168-17132301,17132383-17132556,
17132639-17132707,17132814-17132878,17133441-17133589,
17133747-17133989,17134119-17134255,17134340-17134561,
17134661-17134827,17136680-17136819
Length = 690
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 381 TSISWPTRSPGQRICSEAKWTTLTLEIQRMPLISSTVGRTNR 506
T++S P+R P +C WT TL + + V R R
Sbjct: 28 TNLSHPSRGPVDHLCGRDSWTAKTLRNEAQIDCTRGVSREQR 69
>09_02_0226 - 6007656-6008063,6012166-6012678
Length = 306
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 400 RVLQDSESVQKRSGQH*LWRSKECR*YHQPLGGRTDSRTHKDSCQRR 540
R L+D ++Q + + CR +PL R D RTH+ +C RR
Sbjct: 218 RPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKNCGRR 264
>12_01_1053 -
10840558-10841085,10841363-10841528,10841571-10841787,
10842321-10842420
Length = 336
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 580 DVKHCNGRGGVNFVFADRSLYVSLSLFVRPTVDDISGILW 461
D+KHC R G+ + + S SL + +V DI+ LW
Sbjct: 244 DIKHCQSR-GITVLLSIGSQGGGYSLHINASVADIADNLW 282
>07_03_1696 -
28779455-28779733,28779813-28780074,28780805-28780956,
28781765-28781961,28782258-28782462,28782737-28782982,
28783603-28783719,28784206-28784397,28784480-28784693,
28784835-28784926,28784952-28785001,28785494-28785812,
28785908-28786068,28786407-28786650,28787212-28787467,
28787634-28787834,28788568-28788910,28789003-28789064,
28789645-28789851,28790170-28790978
Length = 1535
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 248 KEEIREILGGGEAQESSHTYGLLNQRYAEFDPKFLTVANK 367
KE+ E+ G + +E+S LN +Y + K+ VANK
Sbjct: 847 KEQTSEVHGARKRKETSPADSGLNSQYGVTESKYELVANK 886
>01_06_1263 +
35840502-35841308,35841763-35841969,35842272-35842370,
35843361-35843464,35844521-35844698,35844774-35845244,
35845383-35845523,35846290-35846349,35846427-35846490,
35847295-35847524,35847606-35847704
Length = 819
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +3
Query: 264 KSLGEGRLKSHHTHTDY*ISVTQNSTRNS*LSPIKYTFPTSISWPTRSPGQRICSEAKWT 443
K+ +G L + + + + + +N T + S K P S S RSP +R ++++W
Sbjct: 375 KATADGILHTKNWDIEPLVPLPENITSTNLTSSAKDLSPFSFSTSRRSPSRR--AKSRWE 432
Query: 444 TLTLE--IQRMPLISSTVGRTN 503
+ E ++ LIS +TN
Sbjct: 433 PVVEEKVANKVELISKESAKTN 454
>01_01_0128 -
1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 383 QYKLADAFSRTANLFRSEVDNIN-FGDPKNAADIINRWADEQTQGHIKTPVSEDKIDPAT 559
QYK F R + R+ + N+N + D ++ D+ A E Q ++ T V + KI AT
Sbjct: 188 QYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLT---APESLQLYLDTRVEQLKI--AT 242
Query: 560 AVAMFNVIF 586
++++ F
Sbjct: 243 ELSLWQEAF 251
>10_08_1042 -
22515298-22515354,22515614-22515709,22515806-22515988,
22516277-22516365,22516481-22516722,22517008-22518116
Length = 591
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 431 SEVDNI--NFGDPKNAADIINRWADEQTQGHIKTPVSEDKID--PATAVAMFNVIF 586
SEV ++ + G P + + +N A GH + P+ DK++ P+T F+++F
Sbjct: 463 SEVSSLILSSGSPDSVSQDMNLQASPALGGHYEAPMLGDKVERAPSTPWMPFSMLF 518
>09_06_0317 -
22265786-22267618,22267874-22268446,22268546-22268677,
22268931-22269137,22269287-22269388,22270742-22271032
Length = 1045
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 293 TLEPPLPQGFP*SLPWTVHRLQTRTRKAAAS 201
+L PPLP G P S P+ QT + A S
Sbjct: 751 SLRPPLPPGLPLSSPFVCPTTQTSEKAAPLS 781
>07_03_1481 + 26860051-26860104,26861114-26861143,26861714-26863174
Length = 514
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 616 VERNVPVPLEENDVKHCNG-RGGVNFVFADRSLYVSLSLFVRPTVDDI 476
VE + +PL+E KHC G RGG + + A S+ L + DD+
Sbjct: 339 VEEEMSIPLKELIEKHCGGVRGGWDNLLAIIPGGSSVPLLPKHICDDV 386
>01_01_0359 +
2829325-2832076,2832223-2832593,2833335-2833695,
2833799-2833868,2834021-2834108,2834325-2834580,
2834758-2834883,2835217-2835425
Length = 1410
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -2
Query: 504 CSSAQRLMISAAFFGS--PKLMLSTSLLNRFAVLENAS 397
CS Q LM+S FFG P+ +++ S+ + LEN S
Sbjct: 341 CSQLQELMLSHNFFGGQLPRSIVNLSMTLQMLDLENNS 378
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,779,993
Number of Sequences: 37544
Number of extensions: 417324
Number of successful extensions: 1267
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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