Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e11r
(745 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 329 1e-90
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 329 1e-90
SB_56| Best HMM Match : Actin (HMM E-Value=0) 329 1e-90
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 329 1e-90
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 327 7e-90
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 324 3e-89
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 259 1e-69
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 7e-27
SB_54| Best HMM Match : Actin (HMM E-Value=0) 106 2e-23
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 85 4e-17
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 69 4e-12
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 47 1e-05
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.007
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.56
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 2.3
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 29 3.0
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 4.0
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 28 7.0
SB_8051| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 28 9.2
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 28 9.2
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25) 28 9.2
SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26) 28 9.2
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 28 9.2
SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 329 bits (809), Expect = 1e-90
Identities = 154/161 (95%), Positives = 158/161 (98%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GI
Sbjct: 178 KLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGI 237
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 385
HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAPPE
Sbjct: 238 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPE 297
Query: 384 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 262
RKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 298 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 329 bits (809), Expect = 1e-90
Identities = 154/161 (95%), Positives = 158/161 (98%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GI
Sbjct: 216 KLCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGI 275
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 385
HETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPE
Sbjct: 276 HETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPE 335
Query: 384 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 262
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 329 bits (809), Expect = 1e-90
Identities = 154/161 (95%), Positives = 158/161 (98%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GI
Sbjct: 215 KLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGI 274
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 385
HETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPE
Sbjct: 275 HETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPE 334
Query: 384 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 262
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 335 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 329 bits (809), Expect = 1e-90
Identities = 154/161 (95%), Positives = 158/161 (98%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GI
Sbjct: 216 KLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGI 275
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 385
HETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAPPE
Sbjct: 276 HETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPE 335
Query: 384 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 262
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 327 bits (803), Expect = 7e-90
Identities = 152/161 (94%), Positives = 158/161 (98%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KLCYVALDFEQEM TAASSSS+EKSYELPDGQVITIGNERFRCPEAL QPSFLGME+ GI
Sbjct: 189 KLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSFLGMESSGI 248
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 385
HETTYNSIMKCDVDIRKDLYANTV+SGGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPE
Sbjct: 249 HETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPE 308
Query: 384 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 262
RKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 309 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 324 bits (797), Expect = 3e-89
Identities = 152/161 (94%), Positives = 158/161 (98%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KL YVALDFEQEMATAA+SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GI
Sbjct: 215 KLAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGI 274
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 385
HETTYNSIMKCDVDIRKDLYANTVLSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAPPE
Sbjct: 275 HETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPE 334
Query: 384 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 262
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 335 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 259 bits (635), Expect = 1e-69
Identities = 118/145 (81%), Positives = 132/145 (91%)
Frame = -2
Query: 696 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIR 517
A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 516 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
KDLY+N VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSILASLS
Sbjct: 65 KDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLS 124
Query: 336 TFQQMWISKQEYDESGPSIVHRKCF 262
TFQQMWI+K+EY E GP IVHRKCF
Sbjct: 125 TFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 118 bits (283), Expect = 7e-27
Identities = 68/181 (37%), Positives = 99/181 (54%), Gaps = 29/181 (16%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KLCYV + EQE A ++ L + Y LPDG+V+ + ERF PEALFQP + +E G+
Sbjct: 219 KLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGV 278
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-------------- 427
E +N+I D+D R + Y + VLSGG+TMYPG+ R+++EI L
Sbjct: 279 AELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKGDTSKLS 338
Query: 426 -------APST-----MKIKI-IAPP-ERKYSVWIGGSILAS-LSTFQQMWISKQEYDES 292
P T K KI I P RK+ V++GG++LA + W++++EY+E
Sbjct: 339 SGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEK 398
Query: 291 G 289
G
Sbjct: 399 G 399
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 106 bits (255), Expect = 2e-23
Identities = 48/86 (55%), Positives = 61/86 (70%)
Frame = -2
Query: 741 LCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIH 562
LCY A+D+E+E+ A +S E Y LPDGQ I IG+ERFR E LFQPS LG + GIH
Sbjct: 2261 LCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIH 2320
Query: 561 ETTYNSIMKCDVDIRKDLYANTVLSG 484
E+ + SI KCD+D+R +L+ N VLSG
Sbjct: 2321 ESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 85.4 bits (202), Expect = 4e-17
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 17/149 (11%)
Frame = -2
Query: 645 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 469
+ + ERF PE F P F + + E N I C +D+R+ LY N VLSGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 468 PGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
R+Q++I + P ++ ++I+ ++Y+VW GGS+LAS
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315
Query: 336 TFQQMWISKQEYDESGPSIVHRKCF*THR 250
F + +K +YDE GPSI F HR
Sbjct: 316 EFYSVCHTKADYDEHGPSICRHNPF-LHR 343
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = -2
Query: 585 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 406
G A G+ + S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 405 KII---APPERKYSVWIGGSILASL 340
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 52.4 bits (120), Expect = 4e-07
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = -2
Query: 549 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIA 394
+S++ C +D RK L N VL GGT M PG R+ +EI L S +K+
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQ 123
Query: 393 PP-ERKYSVWIGGSILASLSTFQQMWISKQEYDE 295
PP + W+GG+I SL +++ Y +
Sbjct: 124 PPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 586
K+CY++ D +E+ ++ L K Y LPDGQ+I+IG E E LF+P L
Sbjct: 846 KICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -2
Query: 546 SIMKCDVDIRKDLYANTVLSGGTTMYPG 463
+I K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.56
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2
Query: 615 PEALFQPSFLGMEACGIHET 556
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +2
Query: 353 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMV-VPPD-NTVLAYKSLRMS 526
+DPP+ +Y L+GG ++ + FCI G++V PP+ N+ + R++
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPECNSAIVLPDARIT 814
Query: 527 TS 532
S
Sbjct: 815 AS 816
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 743 SCATSLLTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSV 618
SCA S+ + L PA+P+ S++ F T++ T+ S+
Sbjct: 970 SCAEPRSIDSKHYTALSPASPASSISCFSTLQLKQMPTRSSI 1011
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 647 SSPSETKDSVAQRLSSNPRSWVWK 576
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 380 STPYGSVDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSAS 261
STP +V PP PSN+ + +K S +P T S S
Sbjct: 217 STPQATVQTPPPPPEPSNEPSTSSKPKASPSPSSITTSTS 256
>SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -3
Query: 338 LPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQP 228
L C SR K P Y G RT ++C +P
Sbjct: 118 LVKRTCNSRKKKKPEKRPSSYNGDTDYRTRKQCRYEP 154
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 501 NTVLSGGTTMYPGIADRMQKEITALAP 421
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -3
Query: 335 PSNKCGSRNKSTTSLAPPLYTGSASK--RTARRCLQQPAAGC 216
P N+ G++ + +L P++TGS + RT + P+A C
Sbjct: 879 PGNQAGNKTRPLRALRSPIHTGSTLEVDRTRQGTRPDPSARC 920
>SB_8051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 840
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 737 ATSLLTSSRRWPPLH-PAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSW 585
AT+L T + W P H P +++L P S PS A L + P+ W
Sbjct: 242 ATTLGTKPQPWGPSHNPGDQAKTLGTKPQP-SGPSHNPRDQATTLGTKPKPW 292
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 710 RWPPLHPAAPSRSLTNFPTVRSSP 639
R+P +H P+ + + FPT+RS P
Sbjct: 883 RYPAVHSQEPASTTSPFPTLRSMP 906
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 362 VDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSA-SKRTA 249
VD+S P SLP+ K G + S P GS+ SK TA
Sbjct: 1939 VDKSEPGSLPTVKFGVTTTADASSMPKFQFGSSGSKDTA 1977
>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
Length = 1097
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 647 SSPSETKDSVAQRLSSNPRSWVWK 576
S+ SETK SV +R + + W+W+
Sbjct: 457 STKSETKASVVERFNRTFKGWMWR 480
>SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26)
Length = 212
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 647 SSPSETKDSVAQRLSSNPRSWVWK 576
S+ SETK SV +R + + W+W+
Sbjct: 93 STKSETKASVVERFNRTFKGWMWR 116
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 731 SLLTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNP 594
S L S R P PA PSR L+NF + + T+ + + ++NP
Sbjct: 1054 SPLKSRRAMDPKDPATPSRKLSNFIPIITRDKPTR-PLPVKSNNNP 1098
>SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 647 SSPSETKDSVAQRLSSNPRSWVWK 576
S+ SETK SV +R + + W+W+
Sbjct: 439 STKSETKASVVERFNRTFKGWMWR 462
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,510,017
Number of Sequences: 59808
Number of extensions: 533763
Number of successful extensions: 1774
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1752
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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