Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e11r
(745 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 334 3e-92
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 334 3e-92
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 334 3e-92
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 334 3e-92
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 334 3e-92
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 334 3e-92
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 334 5e-92
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 334 5e-92
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 334 5e-92
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 328 3e-90
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 314 3e-86
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 159 2e-39
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 150 1e-36
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 120 8e-28
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 101 7e-22
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 92 4e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 75 4e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 75 4e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 9e-06
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.65
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.65
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.65
AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical ... 29 2.6
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 8.0
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 8.0
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 8.0
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 334 bits (822), Expect = 3e-92
Identities = 156/161 (96%), Positives = 160/161 (99%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 275
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 385
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 335
Query: 384 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 262
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 334 bits (822), Expect = 3e-92
Identities = 156/161 (96%), Positives = 160/161 (99%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 275
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 385
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 335
Query: 384 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 262
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 334 bits (822), Expect = 3e-92
Identities = 156/161 (96%), Positives = 160/161 (99%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 275
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 385
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 335
Query: 384 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 262
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 334 bits (822), Expect = 3e-92
Identities = 156/161 (96%), Positives = 160/161 (99%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GI
Sbjct: 172 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 231
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 385
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE
Sbjct: 232 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 291
Query: 384 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 262
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 292 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 334 bits (822), Expect = 3e-92
Identities = 156/161 (96%), Positives = 160/161 (99%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GI
Sbjct: 202 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 261
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 385
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE
Sbjct: 262 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 321
Query: 384 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 262
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 322 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 334 bits (822), Expect = 3e-92
Identities = 156/161 (96%), Positives = 160/161 (99%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 275
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 385
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 335
Query: 384 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 262
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 334 bits (820), Expect = 5e-92
Identities = 155/161 (96%), Positives = 160/161 (99%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI 275
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 385
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 335
Query: 384 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 262
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 334 bits (820), Expect = 5e-92
Identities = 155/161 (96%), Positives = 160/161 (99%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI 275
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 385
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 335
Query: 384 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 262
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 334 bits (820), Expect = 5e-92
Identities = 155/161 (96%), Positives = 160/161 (99%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI 275
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 385
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 335
Query: 384 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 262
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 328 bits (805), Expect = 3e-90
Identities = 154/161 (95%), Positives = 159/161 (98%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI 275
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 385
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPE
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPE 334
Query: 384 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 262
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 335 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 314 bits (772), Expect = 3e-86
Identities = 147/161 (91%), Positives = 152/161 (94%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KLCYVA DFE E+A AASSSSLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GI
Sbjct: 215 KLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGI 274
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 385
HETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPE
Sbjct: 275 HETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPE 334
Query: 384 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 262
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 335 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 159 bits (386), Expect = 2e-39
Identities = 76/159 (47%), Positives = 104/159 (65%)
Frame = -2
Query: 738 CYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 559
CY+ALD T ++S++ SY LPD I I N FR PE LF+P +G E G+
Sbjct: 221 CYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAH 275
Query: 558 TTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK 379
SIMKCDVD+R+ LY+N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER
Sbjct: 276 VVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERN 335
Query: 378 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 262
WIGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 336 SLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 150 bits (363), Expect = 1e-36
Identities = 75/165 (45%), Positives = 101/165 (61%), Gaps = 13/165 (7%)
Frame = -2
Query: 744 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 565
KLCY+A D EQE A ++ L + Y LPDG+VI +G ERF PE LFQP + +E G+
Sbjct: 219 KLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGL 278
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-----------APS 418
E + I D+D R D Y + VLSGGTTMYPG+ R++KE+ L A
Sbjct: 279 SELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQ 338
Query: 417 TMKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 289
KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 339 KFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 120 bits (290), Expect = 8e-28
Identities = 60/143 (41%), Positives = 81/143 (56%), Gaps = 8/143 (5%)
Frame = -2
Query: 669 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 505
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 504 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLST 334
+N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 333 FQQMWISKQEYDESGPSIVHRKC 265
FQQMW+SK EYDESG SIV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 101 bits (241), Expect = 7e-22
Identities = 49/147 (33%), Positives = 87/147 (59%), Gaps = 3/147 (2%)
Frame = -2
Query: 735 YVALDFEQEMATAASSS--SLEKSYELPDGQV-ITIGNERFRCPEALFQPSFLGMEACGI 565
YV D+++E + + SL+ P Q I N RF C E LF+P G++ G+
Sbjct: 393 YVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLDTKGL 452
Query: 564 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 385
H+ + +I++C +D R+ LY N L+GG ++ PGIA+++++E++ + P+T+ ++ P
Sbjct: 453 HQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPW 512
Query: 384 RKYSVWIGGSILASLSTFQQMWISKQE 304
R + ++G I+AS STF+ IS Q+
Sbjct: 513 RYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 91.9 bits (218), Expect = 4e-19
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 17/139 (12%)
Frame = -2
Query: 645 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 469
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 468 PGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLS 337
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 336 TFQQMWISKQEYDESGPSI 280
F Q+ +K EY E GPSI
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Frame = -2
Query: 645 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 466
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 465 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 295
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 294 SGPSIVHRKCF*T 256
G S+ F T
Sbjct: 379 RGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Frame = -2
Query: 645 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 466
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 465 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 295
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 294 SGPSIVHRKCF*T 256
G S+ F T
Sbjct: 379 RGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -2
Query: 543 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 379
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 378 ----YSVWIGGSILASL-STFQQMWISKQEY 301
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.65
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 367 PYGVLPLWRSNDLNLHCRWGESCD 438
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.65
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 367 PYGVLPLWRSNDLNLHCRWGESCD 438
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.65
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 367 PYGVLPLWRSNDLNLHCRWGESCD 438
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical
protein C10E2.2 protein.
Length = 501
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 713 RRWPPLHPAAPSRSLTNFPTVRSSPSE 633
R+ PLHPA P L N P SSP+E
Sbjct: 144 RQRDPLHPAHPLLPLRNMPYDSSSPTE 170
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 203 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 295
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 306 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 205
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 203 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 295
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -2
Query: 387 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 226
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,962,971
Number of Sequences: 27780
Number of extensions: 364005
Number of successful extensions: 1206
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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