Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10e10f
         (643 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1ZCC3 Cluster: Probable hydrolase; n=1; Psychromonas s...    33   7.7  
UniRef50_Q0SW18 Cluster: Prophage ps3 protein 01, putative; n=2;...    33   7.7  

>UniRef50_Q1ZCC3 Cluster: Probable hydrolase; n=1; Psychromonas sp.
           CNPT3|Rep: Probable hydrolase - Psychromonas sp. CNPT3
          Length = 376

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = -2

Query: 375 VFICVKQANNVK*SCTWS*LTNASVNNFKCLFH 277
           V +C KQ NN+    TW  + NASVNN +C+ H
Sbjct: 267 VTLCAKQ-NNLALEITWFDIFNASVNNPQCVKH 298


>UniRef50_Q0SW18 Cluster: Prophage ps3 protein 01, putative; n=2;
           Clostridium|Rep: Prophage ps3 protein 01, putative -
           Clostridium perfringens (strain SM101 / Type A)
          Length = 335

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +3

Query: 411 KSFDLSCTETVIVCAFKKNIGCFGG 485
           K FDLS +E VI+ +  KN+GC+ G
Sbjct: 242 KQFDLSISEKVIIDSVIKNLGCYSG 266


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,654,312
Number of Sequences: 1657284
Number of extensions: 9145658
Number of successful extensions: 13249
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13247
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)