Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10e10f
         (643 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   5.8  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   5.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   7.7  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   7.7  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   7.7  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    21   7.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   7.7  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 380 FHIPVGLVVNKILRFVMYGNC 442
           FHI + ++ + +L   + GNC
Sbjct: 56  FHIGLAIIYSMLLIMSLVGNC 76


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 380 FHIPVGLVVNKILRFVMYGNC 442
           FHI + ++ + +L   + GNC
Sbjct: 56  FHIGLAIIYSMLLIMSLVGNC 76


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 462 KNIGCFGGSPKR 497
           +NI  FGG+PKR
Sbjct: 191 ENIEWFGGNPKR 202


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 462 KNIGCFGGSPKR 497
           +NI  FGG+PKR
Sbjct: 62  ENIEWFGGNPKR 73


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 382 KFSFYLCKTGKQREVKLYM 326
           K + Y CK G   E+ +YM
Sbjct: 217 KNAVYQCKYGNNCEIDMYM 235


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 382 KFSFYLCKTGKQREVKLYM 326
           K + Y CK G   E+ +YM
Sbjct: 14  KNAVYQCKYGNNCEIDMYM 32


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 462 KNIGCFGGSPKR 497
           +NI  FGG+PKR
Sbjct: 191 ENIEWFGGNPKR 202


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,312
Number of Sequences: 438
Number of extensions: 3155
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)