Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e09r
(758 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55341| Best HMM Match : Mt_ATP-synt_B (HMM E-Value=0.0013) 51 9e-07
SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15) 38 0.009
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.082
SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25) 35 0.082
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_40843| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_25198| Best HMM Match : Tropomyosin (HMM E-Value=1.5e-08) 32 0.58
SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12) 32 0.58
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 31 0.77
SB_31305| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 31 1.0
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 31 1.3
SB_10888| Best HMM Match : Collagen (HMM E-Value=7.5) 31 1.3
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 30 1.8
SB_6496| Best HMM Match : Collagen (HMM E-Value=0) 30 1.8
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_59727| Best HMM Match : C2 (HMM E-Value=0.0018) 30 2.3
SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0) 29 3.1
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_25813| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 4.1
SB_34766| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_31228| Best HMM Match : EMP24_GP25L (HMM E-Value=0.22) 29 4.1
SB_29012| Best HMM Match : Avirulence (HMM E-Value=1.1) 29 4.1
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 29 5.4
SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_47768| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_38454| Best HMM Match : DCX (HMM E-Value=4.2) 28 7.2
SB_30893| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06) 28 7.2
SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28) 28 7.2
SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4) 28 7.2
SB_29523| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_11762| Best HMM Match : 4HBT (HMM E-Value=1.6e-19) 28 7.2
SB_42474| Best HMM Match : Collagen (HMM E-Value=0.14) 28 9.5
SB_26644| Best HMM Match : Collagen (HMM E-Value=0) 28 9.5
SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_44710| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_40213| Best HMM Match : Pkinase_Tyr (HMM E-Value=1.1e-07) 28 9.5
SB_30412| Best HMM Match : E-MAP-115 (HMM E-Value=2.8) 28 9.5
SB_10797| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_55341| Best HMM Match : Mt_ATP-synt_B (HMM E-Value=0.0013)
Length = 185
Score = 51.2 bits (117), Expect = 9e-07
Identities = 30/83 (36%), Positives = 41/83 (49%)
Frame = -2
Query: 553 GVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMVYVAHVKFGPKLAAWLDKEVEAT 374
G G F GLA YL S EI ++ E Y + Y K G +A LD +
Sbjct: 69 GSLGQLMFFGGLAAYLLSNEILIIHEETYIAAVMGGTFYWLMKKAGGPIAEMLDNTSQEI 128
Query: 373 ENEWNEGRNQTVKALEDAIEGEK 305
+ +N GRN ++K L+DAI+ EK
Sbjct: 129 LDAFNVGRNASIKHLQDAIDNEK 151
>SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15)
Length = 979
Score = 37.9 bits (84), Expect = 0.009
Identities = 36/112 (32%), Positives = 46/112 (41%), Gaps = 4/112 (3%)
Frame = -1
Query: 329 GGRNRGREDGAVARAGT-GAXHSGQEGERAPAARGRLQ-GEAHVRLLRGEAASGLPAREV 156
G + E G + AG G G E +A A ++ GEA GEA A E
Sbjct: 631 GETSEAGEAGEASEAGVAGEAVEGSEASKAGEAGEAVEAGEASEA---GEAIEAGEAGEA 687
Query: 155 ERGAPSRPEAHGRLD--SEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGSE 6
+ + EA G SE + G+ S GEAG G AG+ V GSE
Sbjct: 688 SEASEAAGEATGEAGEASEASEAGEASEAGEAGEAGEASEAGVAGEAVEGSE 739
Score = 31.9 bits (69), Expect = 0.58
Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 3/91 (3%)
Frame = -1
Query: 329 GGRNRGREDGAVARAGT--GAXHSGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREV 156
G E G + AG GA + + GE + A GEA GEA A E
Sbjct: 846 GEAGEAGEAGEASEAGEAGGASEASEAGEASEAGEASKAGEASKASEAGEAGEASEAGEA 905
Query: 155 ERGAPSRPEAHGRLDS-EQRDQGDHSGPGEA 66
A EA G ++ E + G+ S GEA
Sbjct: 906 SE-AGEASEAGGASEAGEASEAGEASEAGEA 935
Score = 28.7 bits (61), Expect = 5.4
Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 3/114 (2%)
Frame = -1
Query: 338 ESTGGRNRGREDGAVARAGTGAXHSGQEGERAPAARGRLQGEA---HVRLLRGEAASGLP 168
E+TG E + AG A +G+ GE A+ + GEA GEA +
Sbjct: 696 EATGEAGEASE---ASEAGE-ASEAGEAGEAGEASEAGVAGEAVEGSEASKAGEAGEAVE 751
Query: 167 AREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGSE 6
A E + E + G+ S GEA + AG++ SE
Sbjct: 752 AGEASEAGEASEAGEAGKAGEASEAGEASEVGEASEAGENGVASEAGEDGEASE 805
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Frame = -1
Query: 329 GGRNRGREDGAVARAGTG--AXHSGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREV 156
G + E+G + AG A +G++GE + A+ GEA GEA+ A E
Sbjct: 783 GEASEAGENGVASEAGEDGEASEAGEDGEASEASEA---GEASEASEAGEASEASEAGEA 839
Query: 155 ERGAPSRPEAHGRLDSEQRDQGDHSGPGEA 66
+ E + G+ G EA
Sbjct: 840 GEAGEAGEAGEAGEAGEASEAGEAGGASEA 869
Score = 27.9 bits (59), Expect = 9.5
Identities = 25/101 (24%), Positives = 36/101 (35%), Gaps = 2/101 (1%)
Frame = -1
Query: 302 GAVARAGTGAX--HSGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPE 129
G + AG + + + GE A+ GEA GEA+ A E + +
Sbjct: 771 GEASEAGEASEVGEASEAGENGVASEAGEDGEASEAGEDGEASEASEAGEASEASEAGEA 830
Query: 128 AHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGSE 6
+ E + G+ GEAG G AG SE
Sbjct: 831 SEASEAGEAGEAGEAGEAGEAGEAGEASEAGEAGGASEASE 871
Score = 27.9 bits (59), Expect = 9.5
Identities = 31/113 (27%), Positives = 39/113 (34%), Gaps = 5/113 (4%)
Frame = -1
Query: 329 GGRNRGREDGAVARAGTG--AXHSGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREV 156
G + EDG + A A + + GE + A+ GEA GEA A E
Sbjct: 801 GEASEAGEDGEASEASEAGEASEASEAGEASEASEAGEAGEAGEAGEAGEAGEAGEASEA 860
Query: 155 -ERGAPSRPEAHGRLDS--EQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGSE 6
E G S G E G+ S EAG G A + SE
Sbjct: 861 GEAGGASEASEAGEASEAGEASKAGEASKASEAGEAGEASEAGEASEAGEASE 913
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 34.7 bits (76), Expect = 0.082
Identities = 27/96 (28%), Positives = 38/96 (39%)
Frame = -1
Query: 308 EDGAVARAGTGAXHSGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPE 129
EDGA+ G SG+ G+ PA R L G+ + G P + E G
Sbjct: 689 EDGAIGSRGLPGP-SGEPGKPGPAGRAGLAGQ--------DGLPGTPGTKGEPGPTGEKG 739
Query: 128 AHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQE 21
R+ E+ +G G G GP L G G++
Sbjct: 740 EVFRIKGEKGAKGQQGGIGNPGPPGLRGDVGPPGEQ 775
Score = 33.5 bits (73), Expect = 0.19
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = -1
Query: 263 GQEGERAPAARGRLQG----EAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRD 96
G G R PA R + G + L + +G+P + G P P A G L E
Sbjct: 1109 GPAGPRGPAGRNGIDGLPGTKGEPGSLGEKGDAGIPGQRGLTGNPGLPGAQG-LKGEPGR 1167
Query: 95 QGDHSGPGEAG-PGP 54
G + PG G PGP
Sbjct: 1168 DGQNGSPGRKGEPGP 1182
>SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25)
Length = 311
Score = 34.7 bits (76), Expect = 0.082
Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 7/111 (6%)
Frame = -1
Query: 347 PNRESTGGRNRGREDGAVARAGTGAXHSGQEGERAPAARGRLQGEAHVRLLRG-EAASGL 171
P R+ G+ RG E + G+G +G +G P QG R G + SG
Sbjct: 87 PGRQGLQGK-RGPEGDPGSPGGSG--EAGDKGVDGPPGSPGPQGFNGARGPNGPKGDSGR 143
Query: 170 PAREVERGAPSRPEAHGRLDSEQ------RDQGDHSGPGEAGPGPLHRGPG 36
P ++ +G P P A G + G + GP GPGP GPG
Sbjct: 144 PGQDGRQGPPGPPGARGEPGQQAPMMIQVSRPGPNKGPPGPGPGP---GPG 191
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 33.1 bits (72), Expect = 0.25
Identities = 31/117 (26%), Positives = 46/117 (39%), Gaps = 9/117 (7%)
Frame = -1
Query: 344 NRESTGGRNRGREDGAVARAGTGAXHSGQEGERAPAARGRLQGEAHVRLLRGE------- 186
N + G + G + + G + G+ P G L G+A +R L+G
Sbjct: 3714 NTGAPGSQGSTGPRGPIGQPGMAGSQGEKGGKGDPGFPG-LPGQAGLRGLQGPEGQKGSI 3772
Query: 185 AASGLPAREVERGAPSRPEA-HGRLDSEQRDQGDHSGPGEAG-PGPLHRGPGFAGQE 21
A G+P + E+G P RP G R + PG G PG + PG G +
Sbjct: 3773 GAPGIPGKIGEKGVPGRPSTIAGPPGPPGRSKNISGPPGPQGPPGQASQIPGPPGPQ 3829
>SB_40843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 473 FVLHYIDFLAAQVCCQTHTKSVRTRHTSFRVEELEPFFRNKAKSNFA 613
+VL+ IDF A C HT + H +F+VE F R KS F+
Sbjct: 21 YVLNSIDFEA----CDKHTIGIAYAHAAFKVEAATKFTREPLKSGFS 63
>SB_25198| Best HMM Match : Tropomyosin (HMM E-Value=1.5e-08)
Length = 277
Score = 31.9 bits (69), Expect = 0.58
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Frame = -2
Query: 397 LDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELXIQAKKENVLLQLEAAYR 218
L K +E T+ E +E + ALE+AIE +K+ + EL I+ + + +E R
Sbjct: 90 LCKTLEVTDRESDEKMRELEDALEEAIELDKSTADKLAEVELKIKVVQGELEKAVERGDR 149
Query: 217 ERLMYAY--------SEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQ 65
+M + SEV R L+ + + + ER + + +++I N+ + + +E +
Sbjct: 150 AEMMCEHLMNDFTGTSEVLRDLEVK-DAAASEREIDNEDKIEFIQENLKQMVYRYEEAE 207
>SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12)
Length = 182
Score = 31.9 bits (69), Expect = 0.58
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = -1
Query: 275 AXHSGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGR--LDSEQ 102
A H+ G PA +GE R RG R RG P +P A G+ +
Sbjct: 16 ASHNNVRGPPGPAGPPGSKGEKGNRGRRG--------RRGPRGPPGKPGADGKPGIRGPP 67
Query: 101 RDQGDHSGPGEAGPGPLHRGPG 36
+GD G+AGP L PG
Sbjct: 68 GPKGDKGEKGDAGPRGLKGDPG 89
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 31.5 bits (68), Expect = 0.77
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Frame = -1
Query: 263 GQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSE--QRDQG 90
GQ+G++ + G A +R G A G E GAP R A G + +QG
Sbjct: 388 GQKGDQGMPGKPGNPGAAGLRGAPG--ARGDYGERGEPGAPGRDGAPGAQGERGPRGEQG 445
Query: 89 DHSGPGEAGPGPLHRGPGFAGQE 21
G AG G PG G++
Sbjct: 446 KQGEKGHAGEGGADGAPGIPGEQ 468
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Frame = -1
Query: 200 LLRGEAASGLPAREVERGAPSR---PEAHGR-----LDSEQRDQGDHSGPGEAGPGPLHR 45
++R GLP + +RG P P G + D GD PGEAGP +
Sbjct: 113 VIRRVGIPGLPGKRGDRGTPGAKGPPGLAGEPGEPGTQGPRGDPGDVGEPGEAGPSGRNG 172
Query: 44 GPGFAG 27
G AG
Sbjct: 173 ANGTAG 178
>SB_31305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 31.5 bits (68), Expect = 0.77
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -1
Query: 317 RGREDGAVARAGTGAXHSGQEGERAPAARG 228
RG E AGT A HSG G APA G
Sbjct: 204 RGYEQKTPESAGTSARHSGASGREAPAEAG 233
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 31.1 bits (67), Expect = 1.0
Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 2/167 (1%)
Frame = -2
Query: 598 GFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMVYVAHVKF 419
GF+ E++F SK+ +G+A+Y S I+ + Y +G + +
Sbjct: 2183 GFLREKYFVIGISKSFEISANKTRIGVASYSSSANIHFNFNTYNTGYDVENAINAISFSG 2242
Query: 418 GPK--LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELXIQAKKENV 245
G K LA LD E N + + + + AL +G T++ Q L +K
Sbjct: 2243 GAKRNLARGLDATFEGLFN-FTDIQPSDINALIVLTDGRATDEIDMAAQRLV--NEKNVT 2299
Query: 244 LLQLEAAYRERLMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVS 104
++ + A RL +E++R E + RR+ Q ++ +++
Sbjct: 2300 IIAVGAGSHVRL----AELRRLAGLASESPLITRRVIQADSMEELIN 2342
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -1
Query: 176 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVN 15
G P ++ G P P A G + G PGEAGP GPG+ G N
Sbjct: 456 GPPGPQMPPGPPGLPGAPGP-NGPPGINGPLGPPGEAGPPGNPGGPGYQGNHGN 508
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -1
Query: 176 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVN 15
G P ++ G P P A G + G PGEAGP GPG+ G N
Sbjct: 541 GPPGPQMPPGPPGLPGAPGP-NGPPGINGPLGPPGEAGPPGNPGGPGYQGNHGN 593
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = -1
Query: 176 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVN 15
G P ++ G P P A G G PG+ GP GPG+ G N
Sbjct: 286 GPPGPQMPPGPPGLPGAPGP-KGPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGN 338
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = -1
Query: 176 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVN 15
G P ++ G P P A G G PG+ GP GPG+ G N
Sbjct: 371 GPPGPQMPPGPPGLPGAPGP-KGPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGN 423
>SB_10888| Best HMM Match : Collagen (HMM E-Value=7.5)
Length = 208
Score = 30.7 bits (66), Expect = 1.3
Identities = 34/118 (28%), Positives = 45/118 (38%), Gaps = 10/118 (8%)
Frame = -1
Query: 326 GRNRGREDGAVARAG--TGAXHSGQEGERAPAAR----GRLQGEAHVRLLRGEAASGLPA 165
GR R + G +A +G G+ G A + R GR+ G H+ A SG A
Sbjct: 27 GRGRMADSGGMAGSGHMAGSGRMAGSGRMAGSGRMAGTGRMAGSGHMAGSGRMAGSGRMA 86
Query: 164 REVERGAPSRPEAHGRLDSEQR--DQGDHSGPGE-AGPGPLHRGPGFAGQ-EVNGSER 3
R GR+ R D G +G G AG G + AG + GS R
Sbjct: 87 GSGRMAGSGRMAGSGRMAGSGRMADSGRMAGSGRMAGSGRMAGSGRMAGSGRMAGSGR 144
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 30.3 bits (65), Expect = 1.8
Identities = 31/101 (30%), Positives = 37/101 (36%), Gaps = 8/101 (7%)
Frame = -1
Query: 302 GAVARAGTGAXHSGQEGERAPAARGR--LQGEAHVRLLRG----EAASGLPAREVERGAP 141
G V R G +P A G+ L G+ R G + G P E RG P
Sbjct: 126 GMVGRPGRPGFDGAPGAPGSPGAEGKVGLTGQTGPRGPTGPPGLQGVRGAPGNEGARGLP 185
Query: 140 SRPEAHGRLDSEQRDQGDHSGPGEAGP-GPLHRGP-GFAGQ 24
P G+ + G PG GP GP GP G GQ
Sbjct: 186 GNPGLKGKRGA----TGSRGSPGNQGPQGP--SGPQGSKGQ 220
>SB_6496| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1234
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = -1
Query: 263 GQEGERAPAARGRLQGEAHVRLLRGEAAS-GLPAREVERGAPSRPEAHGRLDSEQRDQGD 87
G++GE P G VR +GE+ S GLP +G G + + ++G
Sbjct: 92 GKDGEEGPPGPNGAPGRPGVRGPKGESGSRGLPGNHGVQGERGSQGGRG-IKGGRGNEGS 150
Query: 86 HSGPGEAG--PGPLHRGP 39
PG AG G RGP
Sbjct: 151 AGIPGRAGNKGGRGDRGP 168
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/68 (26%), Positives = 25/68 (36%)
Frame = -1
Query: 326 GRNRGREDGAVARAGTGAXHSGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERG 147
GRN GR R+G R+ GR++ AH + G L R +G
Sbjct: 1767 GRNSGRMKSLAHRSGRNGGRMKSLANRSGRNGGRMKSLAHRSMRNGGRMKSLAHRSSRKG 1826
Query: 146 APSRPEAH 123
+ AH
Sbjct: 1827 GRMKSLAH 1834
>SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 2/103 (1%)
Frame = -1
Query: 341 RESTGGRNRGREDGAVARAGTGAXHSGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAR 162
R +TG R G G + P A+G + + L + A G +
Sbjct: 216 RGATGPRGYTGRTGLRGVPGKSGRNGTPGKNGRPGAKGAMGPRGYRGLTGSKGARGARGK 275
Query: 161 EVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLH--RGP 39
+ RGA RP +G + +G G GP L RGP
Sbjct: 276 QGLRGATGRPGRNG-VPGRPGSKGKTGARGATGPRGLRGLRGP 317
>SB_59727| Best HMM Match : C2 (HMM E-Value=0.0018)
Length = 482
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = -2
Query: 217 ERLMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIADL 38
E M+A +V ++ +EKS A + W VS P+ E +D + D+
Sbjct: 281 EATMFALEDVIQKYSNSIEKSMGTGASAARRQ--WAVSEEENTAAPNAEAANVDSAVRDM 338
Query: 37 ASLAR 23
A +A+
Sbjct: 339 AGMAK 343
>SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0)
Length = 1596
Score = 29.5 bits (63), Expect = 3.1
Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 1/102 (0%)
Frame = -1
Query: 308 EDGAVARAGTGAXHSGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPE 129
E G + A A +G+ E + A + GEA + GEA+ A E + +
Sbjct: 156 ETGEASEATGEASEAGEASEASKAGKASEAGEAGEAVEAGEASKAGRASEAGEASEAGKA 215
Query: 128 AHGRLDSEQRDQGDHSG-PGEAGPGPLHRGPGFAGQEVNGSE 6
+ SE + + +G EAG AG+ V E
Sbjct: 216 SEASEASETGEASEATGEASEAGEASKAGKASEAGEAVEAGE 257
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 29.5 bits (63), Expect = 3.1
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Frame = -2
Query: 397 LDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQ--GQELXIQAKKENV-----LL 239
L++E+E+ + E E R + VKA E E+ EQ++A+ ++ IQA + + L
Sbjct: 1543 LEEEIESKDAEAEEERTRIVKAAE-GFALEREEQFKAELADKDDCIQATENELNQVKHQL 1601
Query: 238 QLEAAYRERLMYAYSEVKRRLDYQLE 161
QL ++ L+ A E R L++ E
Sbjct: 1602 QLAQEAKKTLLEASDERDRELEHLKE 1627
>SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 29.5 bits (63), Expect = 3.1
Identities = 30/105 (28%), Positives = 39/105 (37%), Gaps = 1/105 (0%)
Frame = -1
Query: 341 RESTGGRNRGREDGAVARAGTGAXHSGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAR 162
R G N GA + G + + ++G R + G R A S P+
Sbjct: 646 RNQPGSGNSSPRSGASSPLGRASSPNSKKGSRVNSPIGA----------RRRANSPGPSI 695
Query: 161 EVERGAPSRPE-AHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFA 30
RG P AHGR S +G SGP A P H+ G A
Sbjct: 696 NSPRGRAESPSNAHGRASSPSGTRGPVSGPSGARGSP-HQPRGRA 739
>SB_25813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = -1
Query: 257 EGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSG 78
E E+ P A + + E H + A P E + A +PEA + ++E++ + +
Sbjct: 51 EAEKQPEAEKQPEAEKHPEAEKHPEAEKQPEAEKQPEAEKQPEAEKQPEAEKQPEAEKHP 110
Query: 77 PGEAGP 60
E P
Sbjct: 111 EAEKQP 116
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = -1
Query: 257 EGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSG 78
E E+ P A + E H + A P E + A +PEA + ++E+ + +
Sbjct: 57 EAEKQPEAEKHPEAEKHPEAEKQPEAEKQPEAEKQPEAEKQPEAEKQPEAEKHPEAEKQP 116
Query: 77 PGEAGP 60
E P
Sbjct: 117 EAEKHP 122
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = -1
Query: 257 EGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSG 78
E E+ P A + + E H + A P E A PEA + ++E++ + +
Sbjct: 33 EAEKQPEAEKQPEAEKHPEAEKQPEAEKQPEAEKHPEAEKHPEAEKQPEAEKQPEAEKQP 92
Query: 77 PGEAGP 60
E P
Sbjct: 93 EAEKQP 98
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = -1
Query: 257 EGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGD-HS 81
E E+ P A + + E H + A P E A PEA ++E+ + + H
Sbjct: 105 EAEKHPEAEKQPEAEKHPEAEKHPEAEKHPEAEKHPEAQKHPEAEKHPEAEKHPEAEKHP 164
Query: 80 GPGEAGPGPLHRGP 39
EA G L GP
Sbjct: 165 EAKEATLGLLLFGP 178
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 29.1 bits (62), Expect = 4.1
Identities = 27/95 (28%), Positives = 42/95 (44%)
Frame = -2
Query: 412 KLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELXIQAKKENVLLQL 233
KL+ L KE TE NE + KALE I + + ++G +QAK ++ L
Sbjct: 501 KLSISLKKEFSVTEE--NERLLREKKALESRILDAEEQVSSSKGMITALQAKLDDALNSR 558
Query: 232 EAAYRERLMYAYSEVKRRLDYQLEKSNVERRLAQK 128
EA Y ++ D + +VE LA++
Sbjct: 559 EAKSDWDSNRIYELEEKIKDLSKKLKDVESDLAER 593
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/93 (25%), Positives = 43/93 (46%)
Frame = -2
Query: 394 DKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELXIQAKKENVLLQLEAAYRE 215
+KEVE NE + + KALE A G+K E+ + + ++ +E LQ + R
Sbjct: 2190 EKEVEMLSRV-NELQEELAKALESAEAGKKAEKQLKEQESEHVELSREKEALQKQLYDRL 2248
Query: 214 RLMYAYSEVKRRLDYQLEKSNVERRLAQKHMVD 116
+ + E R + E S ++ A K +++
Sbjct: 2249 TEISSLKEELSRNKHS-ETSKLDEAEAAKALLE 2280
>SB_34766| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/66 (22%), Positives = 29/66 (43%)
Frame = -1
Query: 752 NNVVARGFAFRCEQTDRVHSTSRTGLRLRCSNTRPENLCSPCKG*ARQS*TWLYS*RMVP 573
+ + G+ R + ++ G+R +C N ++C C+ R + T + +P
Sbjct: 98 DQAIKEGYIHRGITCNTCQASPICGVRYKCGNCVDYDICERCESQDRHNSTHAFIKIRIP 157
Query: 572 ILPLEN 555
I PL N
Sbjct: 158 IPPLAN 163
>SB_31228| Best HMM Match : EMP24_GP25L (HMM E-Value=0.22)
Length = 350
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/73 (19%), Positives = 35/73 (47%)
Frame = -2
Query: 430 HVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELXIQAKKE 251
H + P+L W++ + + E + + + + +A E + E+ R Q +E + +E
Sbjct: 61 HRECSPELKPWMEAQQKEMEEKLRLKKEEEERIQREAEEAAERERLRIQAEEEARRKAEE 120
Query: 250 NVLLQLEAAYRER 212
+++E R++
Sbjct: 121 EERIRIEEIKRQQ 133
>SB_29012| Best HMM Match : Avirulence (HMM E-Value=1.1)
Length = 444
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 725 FRCEQTDRVHSTSRTGLRLRCSNTRPENLCS 633
+RC TD H T T +R T P+ LC+
Sbjct: 2 YRCHTTDCAHCTDFTRQTVRTVQTPPDRLCA 32
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 725 FRCEQTDRVHSTSRTGLRLRCSNTRPENLCS 633
+R QTD H T T LR T P+ LC+
Sbjct: 194 YRHHQTDCAHCTDFTRQTLRIVQTPPDRLCA 224
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 405 ANFGPNFT*ATYTMTSSDSPE*YS 476
ANFGP FT T+T TS D+ E +S
Sbjct: 89 ANFGPGFT--TFTYTSGDARETFS 110
>SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/92 (26%), Positives = 37/92 (40%)
Frame = -1
Query: 338 ESTGGRNRGREDGAVARAGTGAXHSGQEGERAPAARGRLQGEAHVRLLRGEAASGLPARE 159
+ +G R+ RE G + +A + SG+ GE + + GE+ GE SG
Sbjct: 638 DESGERSASRESGKL-KAESDIDGSGESGESGESGKSGESGESGESGESGE--SGESGES 694
Query: 158 VERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG 63
E G G E + G+ GE+G
Sbjct: 695 GESGESGESGESGE-SGESGESGESGESGESG 725
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 28.7 bits (61), Expect = 5.4
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 11/101 (10%)
Frame = -1
Query: 347 PNRESTGGRNRGREDGAV-ARAGTGAXHSGQEG----ERAPAARGRLQGEAHVRLLR--- 192
P+ + GR RG+ G V ++ G SG + E+ P R A R R
Sbjct: 1130 PSSPAIRGRGRGKGRGEVGSKQRGGLGRSGDKSPVRMEQEPPPRSAASPPARGRRGRKRV 1189
Query: 191 GEAASGLPA---REVERGAPSRPEAHGRLDSEQRDQGDHSG 78
GE SG +E+E+ PS+ A+ + S + D G
Sbjct: 1190 GEDISGNEQSLEKEIEKEEPSQSSANSKSPSPEHQAADREG 1230
>SB_47768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 320 NRGREDGAVARAGTGAXHSGQEGERAPAARGRLQGEAHV 204
NRGR DGA++R G R ARG Q +V
Sbjct: 4 NRGRSDGAISRVRHGRGGQRASRGRGDGARGGSQRTKYV 42
>SB_38454| Best HMM Match : DCX (HMM E-Value=4.2)
Length = 239
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -1
Query: 167 AREVERGAPSRPE-AHGRLDSEQRDQGDHSGPGEAGPGPLH 48
A+ + + P+R + +HGR +S++ D+ S G GP+H
Sbjct: 69 AKNLSKTTPNRTKPSHGRKNSDRSDRKMSSTTGSIKDGPVH 109
>SB_30893| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/83 (14%), Positives = 40/83 (48%)
Frame = -2
Query: 376 TENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELXIQAKKENVLLQLEAAYRERLMYAY 197
++ EW + + + +EG+ +W+ + E + +++ + Q + ++ R
Sbjct: 74 SDREWKNRKTENGRTERQRMEGQSDREWKNRKTETR-RTERQRMEEQKDREWKNRKTENG 132
Query: 196 SEVKRRLDYQLEKSNVERRLAQK 128
V++R++ Q ++ +R++ +
Sbjct: 133 RTVRQRMEEQKDREWKDRKIENR 155
>SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06)
Length = 434
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1
Query: 98 DQGDHSGPGEAGPGPLHRGPGFAG 27
D+GD PGE G P P FAG
Sbjct: 205 DKGDRGKPGETGSAPPRMKPIFAG 228
>SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28)
Length = 552
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/88 (26%), Positives = 46/88 (52%)
Frame = -2
Query: 400 WLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELXIQAKKENVLLQLEAAY 221
W+ KE+++ + + +Q ++AL+ ++TE+ R++ Q L K+ L+ +
Sbjct: 159 WIKKEMKSLTSTVAKKESQ-IQALQ-----QETERLRSEFQRLETDIKERTDDLEQRRSS 212
Query: 220 RERLMYAYSEVKRRLDYQLEKSNVERRL 137
E+ YSE+KR+ D E +N + L
Sbjct: 213 IEQNNKEYSELKRKRD---ELTNTRKEL 237
>SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4)
Length = 311
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = -1
Query: 251 ERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPG 72
ER + RL+ A + R G A E E+GA + + + E +QG +G
Sbjct: 2 ERLNKEKERLKTRAIGQGKRVNEKEGKGATEQEKGAIKQGKGATEQEKEATEQG--NGAS 59
Query: 71 EAGPGPLHRGPGFAGQEVNG 12
+ G G +G G AG++ G
Sbjct: 60 KQGTGASEQGKG-AGEQEKG 78
>SB_29523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 502
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 20 LPGQRSQVRDAAVQGLLLLVRSDRLGHVAHYPVDHVLLGETALHVRLLELVV 175
+ G S ++A + + + V L HV H P D V +G+ L + L L+V
Sbjct: 130 IDGDTSGRQEAGLADVAIEVLHRLLSHVIHGPHDQVGVGDDQLSILFLLLIV 181
>SB_11762| Best HMM Match : 4HBT (HMM E-Value=1.6e-19)
Length = 519
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -2
Query: 340 VKALEDAIEGEKTEQWRAQGQELXIQAKKENVLLQL--EAAYRERLMYAYSEVKRRL 176
V ++ED I GEK E R + AK V L ERL YA + +RR+
Sbjct: 91 VVSVEDLITGEKREVSRGFFTFVAFDAKHNKVQLSPIDPVTEEERLQYALASERRRM 147
>SB_42474| Best HMM Match : Collagen (HMM E-Value=0.14)
Length = 221
Score = 27.9 bits (59), Expect = 9.5
Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Frame = -1
Query: 341 RESTGGRNRGREDGAVARAGTGAXHSGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAR 162
R + GG GA G G + G R A+ G G RG A G R
Sbjct: 119 RGNRGGFTSPGRGGAAGFRGRGRGGMTRGGPRGRASFG---GRGARGASRGAARGGRGGR 175
Query: 161 EVERGAPSRPE-AHGRLDSEQRDQGDHS 81
RGA ++PE + +LD E HS
Sbjct: 176 GRGRGALNQPEKSKDQLDKELDQYMSHS 203
>SB_26644| Best HMM Match : Collagen (HMM E-Value=0)
Length = 877
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = -1
Query: 197 LRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGP-GPLHRGPGFAGQE 21
LR G P R G P G + EQ +G PG GP GP + PG G +
Sbjct: 110 LRHIGRLGPPGRRGPPGQNGAPGLDGE-NGEQGQKGSSGDPGSEGPVGPPGK-PGMDGAK 167
Query: 20 VN 15
V+
Sbjct: 168 VS 169
>SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1183
Score = 27.9 bits (59), Expect = 9.5
Identities = 25/101 (24%), Positives = 35/101 (34%)
Frame = -1
Query: 308 EDGAVARAGTGAXHSGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPE 129
E G G A +G+ GE + A G A GEA+ EV + +
Sbjct: 275 EAGEAGEVGK-ASEAGETGEASEAGEASEVGVAREASEAGEASEASEVGEVSEASEAGEA 333
Query: 128 AHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGSE 6
+ E + G+ S EAG AG+ SE
Sbjct: 334 SEAVEAGEASEAGEASKASEAGEASEAGEASEAGEAGEASE 374
>SB_44710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 835
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 527 TKSVRTRHTSFRVEELEPFFRNKAKSNFAWLTPYRASKGFLVVCCY 664
TK + H+ R + PFF ++ K + W T A+ G++V Y
Sbjct: 149 TKEINNMHSELR--KSIPFFSSRYKGHGIWDTLMAANLGYMVAFMY 192
>SB_40213| Best HMM Match : Pkinase_Tyr (HMM E-Value=1.1e-07)
Length = 750
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 325 DAIEGEKTEQWRAQGQELXIQAKKENVL 242
D + + +QW EL ++ KKENVL
Sbjct: 238 DVVLADLDQQWMLDSAELCLEEKKENVL 265
>SB_30412| Best HMM Match : E-MAP-115 (HMM E-Value=2.8)
Length = 492
Score = 27.9 bits (59), Expect = 9.5
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = -1
Query: 338 ESTGGRNRGREDGAVARAGTGAXHSGQEGERAPAARGRLQGEAHVRLLRGEAASGLPARE 159
+ GGR+RG +G+V A + + GR +G+ ++ + +E
Sbjct: 155 QGNGGRHRGNGEGSVVNA---QQEWKERQKELQGKGGRHRGDGEGSVVNAQQEWKERQKE 211
Query: 158 VE-RGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGSE 6
++ +G R G + + Q++ + + G G HRG G G VN +
Sbjct: 212 LQGKGGRHRGNGEGSVVNAQQEWKERQKELQ-GKGGRHRGNG-EGSAVNAQQ 261
>SB_10797| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 754
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -2
Query: 202 AYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIAD 41
A +VKRR D + ++ R + + +W T A P Q +++ +RCI +
Sbjct: 423 ASKDVKRRSDQLVNLASSARHVG---ISEWFARKRTLAGLPPQSRRSFERCITN 473
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,236,549
Number of Sequences: 59808
Number of extensions: 496142
Number of successful extensions: 1875
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1832
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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