Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10e09r
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    34   0.005
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    31   0.029
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    27   0.63 
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    26   1.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   3.3  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       23   7.7  
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    23   7.7  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 33.9 bits (74), Expect = 0.005
 Identities = 26/89 (29%), Positives = 32/89 (35%), Gaps = 3/89 (3%)
 Frame = -1

Query: 263 GQEGERAPAARGRLQGEAHVRLLRG-EAASGLPAREVERGAPSRPEAHGRLDSEQRD--Q 93
           G EG + P       GE   R   G +   G+P R    G P      G   S      Q
Sbjct: 420 GYEGPQGPKGMDGFDGEKGERGQMGPKGGQGVPGRPGPEGMPGDKGDKGESGSVGMPGPQ 479

Query: 92  GDHSGPGEAGPGPLHRGPGFAGQEVNGSE 6
           G    PG+ GP  L   PG  G  + G +
Sbjct: 480 GPRGYPGQPGPEGLRGEPGQPGYGIPGQK 508



 Score = 27.9 bits (59), Expect = 0.36
 Identities = 22/67 (32%), Positives = 30/67 (44%)
 Frame = -1

Query: 263 GQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDH 84
           GQ+G    A    L+G+   R  +G   +   A+E   GAP  P   GR D E+ + G  
Sbjct: 506 GQKGNAGMAGFPGLKGQKGERGFKGVMGTPGDAKEGRPGAPGLP---GR-DGEKGEPGRP 561

Query: 83  SGPGEAG 63
             PG  G
Sbjct: 562 GLPGAKG 568



 Score = 27.9 bits (59), Expect = 0.36
 Identities = 25/81 (30%), Positives = 32/81 (39%)
 Frame = -1

Query: 263 GQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDH 84
           GQ+GER         G+A         A GLP R+ E+G P RP   G        +G+ 
Sbjct: 521 GQKGERGFKGVMGTPGDAKEGR---PGAPGLPGRDGEKGEPGRPGLPGA-------KGER 570

Query: 83  SGPGEAGPGPLHRGPGFAGQE 21
              GE G       PG  G +
Sbjct: 571 GLKGELGGRCTDCRPGMKGDK 591



 Score = 27.5 bits (58), Expect = 0.48
 Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
 Frame = -1

Query: 266 SGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGD 87
           SG+ G  A     +L+     +  +GE  +GL   + E+G P      G++      +GD
Sbjct: 645 SGEPGRDAEIPMDQLKPIKGDKGEKGE--NGLMGIKGEKGFPGPVGPEGKMGLRGM-KGD 701

Query: 86  HSGPGEAG----PG-PLHRG-PGFAGQEVNG 12
              PGEAG    PG P   G PG  GQ V G
Sbjct: 702 KGRPGEAGIDGAPGAPGKDGLPGRHGQTVKG 732


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 31.5 bits (68), Expect = 0.029
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
 Frame = -1

Query: 263 GQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDH 84
           G +GE        L GE     L G    GL  R+ +RG P  P     + + + D+G+ 
Sbjct: 424 GFKGEPGRIGERGLMGEKGDMGLTGPV--GLSGRKGDRGVPGSPGLPATVAAIKGDKGEP 481

Query: 83  SGPGEAG-PGPLHRGPGFAGQ 24
             PG  G PG +   PG +G+
Sbjct: 482 GFPGAIGRPGKV-GVPGLSGE 501



 Score = 29.5 bits (63), Expect = 0.12
 Identities = 23/80 (28%), Positives = 33/80 (41%)
 Frame = -1

Query: 263 GQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDH 84
           G++G+R       L G    +  +GE     P R   +G P  P  +G        +GD 
Sbjct: 681 GEKGDRGLPGMSGLNGAPGEKGQKGETPQLPPQR---KGPPGPPGFNG-------PKGDK 730

Query: 83  SGPGEAGPGPLHRGPGFAGQ 24
             PG AGP  +   PG  G+
Sbjct: 731 GLPGLAGPAGIPGAPGAPGE 750



 Score = 27.1 bits (57), Expect = 0.63
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -1

Query: 179 SGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGP 60
           SGL  R    G P  P+    L   Q ++GD   PG  GP
Sbjct: 602 SGLMGRPGNDGLPG-PQGQRGLPGPQGEKGDQGPPGFIGP 640



 Score = 25.8 bits (54), Expect = 1.5
 Identities = 20/64 (31%), Positives = 23/64 (35%)
 Frame = -1

Query: 263 GQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDH 84
           G  G   PA    L G        GE     P  + E+G P RP   GR D      G+ 
Sbjct: 512 GLPGLPGPAGLNGLPGMKGDMGPLGEKGDACPVVKGEKGLPGRPGKTGR-DGPPGLTGEK 570

Query: 83  SGPG 72
             PG
Sbjct: 571 GEPG 574


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 27.1 bits (57), Expect = 0.63
 Identities = 16/65 (24%), Positives = 31/65 (47%)
 Frame = -2

Query: 241 LQLEAAYRERLMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQA 62
           LQ  A   +  M+  S+  +R   +L     ++ + QK  V   +SN+ +A   + ++Q 
Sbjct: 304 LQASAGVTKVSMWQLSDGTKRARVRLPAKAAKQLVGQKLTVSCCISNIKEAPAINLQQQR 363

Query: 61  LDRCI 47
             RC+
Sbjct: 364 CYRCL 368


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +2

Query: 458 QSGVIFVLHYIDFLAAQVCCQTHTKSVRTRHTSFRV 565
           +SG I VLH +  L    CC  HT     R+    V
Sbjct: 575 RSGFILVLHGVPGLQQLCCCIRHTPPAIARNVGSSV 610


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 20/49 (40%), Positives = 21/49 (42%)
 Frame = -1

Query: 284  GTGAXHSGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPS 138
            G G    G  G  AP A G + G A V        SGLPA     GAPS
Sbjct: 3200 GAGLAMVGAGGSTAPGAGG-VPGVAVV------PGSGLPAAAASGGAPS 3241


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 241 LQLEAAYRERLMYAYSEVKRRLDYQLEKSNVER 143
           + L   YR + M  YS   + LD++L+ S   R
Sbjct: 170 IPLSDTYRNQSMTYYSSEVQSLDFELDTSGSTR 202


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 679 PVRLVLCTRSVCSHLNAKP 735
           P  +V CTR+VC+  N  P
Sbjct: 117 PSMIVKCTRNVCTGRNEVP 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 763,658
Number of Sequences: 2352
Number of extensions: 15715
Number of successful extensions: 49
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)