Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e09f
(449 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical pr... 51 3e-07
U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b ... 48 2e-06
U00036-15|AAK29857.1| 731|Caenorhabditis elegans Hypothetical p... 29 1.6
AF143148-1|AAD37914.1| 315|Caenorhabditis elegans R151.8B prote... 29 1.6
Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical p... 29 2.1
Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL023845-6|CAA19536.1| 168|Caenorhabditis elegans Hypothetical ... 28 3.6
AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical ... 27 4.8
AJ871144-1|CAI38753.2| 476|Caenorhabditis elegans UDP-galactopy... 27 6.3
AF125442-8|AAD12787.2| 476|Caenorhabditis elegans Hypothetical ... 27 6.3
AC024817-29|AAK68530.1| 280|Caenorhabditis elegans C-type lecti... 27 6.3
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 27 8.3
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 27 8.3
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 27 8.3
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 27 8.3
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 27 8.3
U00052-11|AAK21425.2| 514|Caenorhabditis elegans Hypothetical p... 27 8.3
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 27 8.3
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 27 8.3
>Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical
protein F35G12.10 protein.
Length = 301
Score = 51.2 bits (117), Expect = 3e-07
Identities = 25/79 (31%), Positives = 41/79 (51%)
Frame = +1
Query: 205 PGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSXEIYVMEHEYYSGLSLLVMVY 384
P K RL +P+ WF F TG +GPY F GL +L + E++V E + + + ++
Sbjct: 102 PPKTRLLMMPDSWFTAFQKVTGTSGPYLFFGGLFAFLVNKELWVFEEQGHMTVGWILFYL 161
Query: 385 VAHVKFGPKLAAWLDKEVE 441
+ G K+ A L K+ +
Sbjct: 162 LVSRTAGYKIDAGLYKDYQ 180
>U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b
homolog protein 2 protein.
Length = 305
Score = 48.4 bits (110), Expect = 2e-06
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = +1
Query: 184 ARPVRGEPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSXEIYVMEHE 348
ARP+ P K RL +P+ WF F TGV+GPY F GL +L + E++V E +
Sbjct: 99 ARPMY--PPKSRLLMMPDSWFTPFQKVTGVSGPYLFFGGLFAFLVNKELWVFEEQ 151
>U00036-15|AAK29857.1| 731|Caenorhabditis elegans Hypothetical
protein R151.8 protein.
Length = 731
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = -2
Query: 448 RSLQLPCP-TKQPILVRISREPHTP*PAVTVRSNIRAPLHRFPXCTGMLPD 299
R LQ P P T + + +EP T T I P P CT +L D
Sbjct: 29 RPLQSPAPITSTSLTSGLDKEPQTSTDNTTTNGEILNPSSSEPTCTSVLSD 79
>AF143148-1|AAD37914.1| 315|Caenorhabditis elegans R151.8B protein
protein.
Length = 315
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = -2
Query: 448 RSLQLPCP-TKQPILVRISREPHTP*PAVTVRSNIRAPLHRFPXCTGMLPD 299
R LQ P P T + + +EP T T I P P CT +L D
Sbjct: 29 RPLQSPAPITSTSLTSGLDKEPQTSTDNTTTNGEILNPSSSEPTCTSVLSD 79
>Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 324 LAAQVCCQTHTKSVRTRHTSFRVEELEPFFRNKAKSNFAWLTPYRASKG 178
LAA+ C T +V+ V E E ++ K+ WL+P SKG
Sbjct: 302 LAARNCLITKELNVKISDFGLSVNESETKMKSLKKAPIRWLSPETFSKG 350
>Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 324 LAAQVCCQTHTKSVRTRHTSFRVEELEPFFRNKAKSNFAWLTPYRASKG 178
LAA+ C T +V+ V E E ++ K+ WL+P SKG
Sbjct: 302 LAARNCLITKELNVKISDFGLSVNESETKMKSLKKAPIRWLSPETFSKG 350
>AL023845-6|CAA19536.1| 168|Caenorhabditis elegans Hypothetical
protein Y51B9A.8 protein.
Length = 168
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 294 CGSGNIPVQXGNLCNGARILLRTVTAGHGVCG 389
C +GN V G+ C A+++ T+T G+ G
Sbjct: 36 CPAGNTEVSSGDCCPTAQVVNGTITCNGGLVG 67
>AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical
protein F40A3.7 protein.
Length = 409
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 222 WLYS*RMVPILPLENWCDGSLHFWC 296
W Y V ++ L NWC H WC
Sbjct: 95 WFYLHSKVHLISLANWCSSVAH-WC 118
>AJ871144-1|CAI38753.2| 476|Caenorhabditis elegans
UDP-galactopyranose mutase protein.
Length = 476
Score = 27.1 bits (57), Expect = 6.3
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +1
Query: 79 SRVALRSGASKQTACTALVARGSASDVATHDQKTFARPVRGEPGKVRLGF---IPEEWFQ 249
SRVA + C+ A + +D F P G G V +P EWF+
Sbjct: 186 SRVAKLPQEKLEELCSMDQAELANADFGWGPNSYFTFPTYGGTGNVWNSMAKKLPNEWFK 245
Query: 250 FFHSKTGV 273
F + TGV
Sbjct: 246 FNNKVTGV 253
>AF125442-8|AAD12787.2| 476|Caenorhabditis elegans Hypothetical
protein H04M03.4 protein.
Length = 476
Score = 27.1 bits (57), Expect = 6.3
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +1
Query: 79 SRVALRSGASKQTACTALVARGSASDVATHDQKTFARPVRGEPGKVRLGF---IPEEWFQ 249
SRVA + C+ A + +D F P G G V +P EWF+
Sbjct: 186 SRVAKLPQEKLEELCSMDQAELANADFGWGPNSYFTFPTYGGTGNVWNSMAKKLPNEWFK 245
Query: 250 FFHSKTGV 273
F + TGV
Sbjct: 246 FNNKVTGV 253
>AC024817-29|AAK68530.1| 280|Caenorhabditis elegans C-type lectin
protein 85 protein.
Length = 280
Score = 27.1 bits (57), Expect = 6.3
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = -3
Query: 333 IDFLAAQVCCQTHTKSVRTRHTSFRVEELEPFFRNKAKSNFAWLTPYRAS 184
+ F AQ C + +++ HTS + L R + S W+ RAS
Sbjct: 38 LKFTDAQSACYSQNQNLAVIHTSLQANFLASIVRTQTGSQKFWIGLSRAS 87
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/49 (26%), Positives = 19/49 (38%)
Frame = -3
Query: 357 GVIFVLHYIDFLAAQVCCQTHTKSVRTRHTSFRVEELEPFFRNKAKSNF 211
GV F L + CC+ KS +TRH + + A S +
Sbjct: 447 GVFFSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINSAANSAY 495
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/49 (26%), Positives = 19/49 (38%)
Frame = -3
Query: 357 GVIFVLHYIDFLAAQVCCQTHTKSVRTRHTSFRVEELEPFFRNKAKSNF 211
GV F L + CC+ KS +TRH + + A S +
Sbjct: 473 GVFFSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINSAANSAY 521
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/49 (26%), Positives = 19/49 (38%)
Frame = -3
Query: 357 GVIFVLHYIDFLAAQVCCQTHTKSVRTRHTSFRVEELEPFFRNKAKSNF 211
GV F L + CC+ KS +TRH + + A S +
Sbjct: 447 GVFFSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINSAANSAY 495
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/49 (26%), Positives = 19/49 (38%)
Frame = -3
Query: 357 GVIFVLHYIDFLAAQVCCQTHTKSVRTRHTSFRVEELEPFFRNKAKSNF 211
GV F L + CC+ KS +TRH + + A S +
Sbjct: 473 GVFFSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINSAANSAY 521
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/49 (26%), Positives = 19/49 (38%)
Frame = -3
Query: 357 GVIFVLHYIDFLAAQVCCQTHTKSVRTRHTSFRVEELEPFFRNKAKSNF 211
GV F L + CC+ KS +TRH + + A S +
Sbjct: 314 GVFFSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINSAANSAY 362
>U00052-11|AAK21425.2| 514|Caenorhabditis elegans Hypothetical
protein K02F3.1 protein.
Length = 514
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 24 RAIFAFWK*LIKYTINNVVARGFAFRCEQTDRVHSTSRTG 143
+ IF FWK + KY +N A+GF ++ + + G
Sbjct: 297 KRIFQFWKMISKYDRSNGNAQGFLVTAQRLEEESKSDDIG 336
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/49 (26%), Positives = 19/49 (38%)
Frame = -3
Query: 357 GVIFVLHYIDFLAAQVCCQTHTKSVRTRHTSFRVEELEPFFRNKAKSNF 211
GV F L + CC+ KS +TRH + + A S +
Sbjct: 447 GVFFSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINSAANSAY 495
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/49 (26%), Positives = 19/49 (38%)
Frame = -3
Query: 357 GVIFVLHYIDFLAAQVCCQTHTKSVRTRHTSFRVEELEPFFRNKAKSNF 211
GV F L + CC+ KS +TRH + + A S +
Sbjct: 473 GVFFSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINSAANSAY 521
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,416,429
Number of Sequences: 27780
Number of extensions: 240722
Number of successful extensions: 655
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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