Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10e08r
         (714 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin pro...    97   1e-20
AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin (...    97   1e-20
Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical pr...    34   0.12 
AF038609-2|AAK29794.1|  226|Caenorhabditis elegans Hypothetical ...    31   0.82 
AF038609-1|AAO61425.1|  234|Caenorhabditis elegans Hypothetical ...    29   3.3  
AC006603-7|ABB51201.1|  576|Caenorhabditis elegans Hypothetical ...    28   5.8  

>L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin
           protein.
          Length = 264

 Score = 96.7 bits (230), Expect = 1e-20
 Identities = 38/70 (54%), Positives = 54/70 (77%)
 Frame = -1

Query: 696 IWKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRCDADDDHRVTLAEWGKCLE 517
           IWK+C+LD + +D+ VS HEL PI AP++ +E CI PFL+ CDA++D  +++ EWGKCL 
Sbjct: 195 IWKFCELDTKPHDKSVSHHELIPITAPVIPMESCIKPFLEGCDANNDGNISIKEWGKCLG 254

Query: 516 LDELEMEERC 487
           L E E++ERC
Sbjct: 255 LKEGEIQERC 264


>AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin
           (sparc) related protein1 protein.
          Length = 264

 Score = 96.7 bits (230), Expect = 1e-20
 Identities = 38/70 (54%), Positives = 54/70 (77%)
 Frame = -1

Query: 696 IWKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRCDADDDHRVTLAEWGKCLE 517
           IWK+C+LD + +D+ VS HEL PI AP++ +E CI PFL+ CDA++D  +++ EWGKCL 
Sbjct: 195 IWKFCELDTKPHDKSVSHHELIPITAPVIPMESCIKPFLEGCDANNDGNISIKEWGKCLG 254

Query: 516 LDELEMEERC 487
           L E E++ERC
Sbjct: 255 LKEGEIQERC 264


>Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical
           protein T04F3.2 protein.
          Length = 260

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = -1

Query: 705 NAAIWKWCDLDAQTNDRFVSRHELFPIRAPLMA---LEHCIAPFLDRCDADDDHRVTLAE 535
           +A  WK+  L+   N+  + R E  P ++ L+    +  C       CD + D ++T  E
Sbjct: 172 SAIRWKFNQLNINHNN-VLERSEWKPFKSVLLEWKNVRQCSRNLFKTCDLNKDRKLTFDE 230

Query: 534 WGKCL 520
           W KC+
Sbjct: 231 WRKCI 235


>AF038609-2|AAK29794.1|  226|Caenorhabditis elegans Hypothetical
           protein C54E4.2a protein.
          Length = 226

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
 Frame = -1

Query: 693 WKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRC-DADDDHRVTLAEWGKCLE 517
           W +   D   + + +S+ EL PI       E C+  F+D C D   D  +++ EW  C  
Sbjct: 83  WMFNQWDGNQDGK-LSKAELRPIERG--GNEACVEEFIDMCDDMVVDGSISVDEWCDCFT 139

Query: 516 L-DELEMEERCDDFNENAEHYL 454
             D+L  E  C     + + +L
Sbjct: 140 FSDDLRHEPPCHKAKHDVDPHL 161


>AF038609-1|AAO61425.1|  234|Caenorhabditis elegans Hypothetical
           protein C54E4.2b protein.
          Length = 234

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = -1

Query: 603 EHCIAPFLDRC-DADDDHRVTLAEWGKCLEL-DELEMEERCDDFNENAEHYL 454
           E C+  F+D C D   D  +++ EW  C    D+L  E  C     + + +L
Sbjct: 118 EACVEEFIDMCDDMVVDGSISVDEWCDCFTFSDDLRHEPPCHKAKHDVDPHL 169


>AC006603-7|ABB51201.1|  576|Caenorhabditis elegans Hypothetical
           protein B0524.7 protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -1

Query: 519 ELDELEMEERCDDFNENAE 463
           E+++LE E RC   NENAE
Sbjct: 193 EIEKLETEMRCQKMNENAE 211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,051,758
Number of Sequences: 27780
Number of extensions: 253703
Number of successful extensions: 543
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)