Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10e07r
         (768 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    27   0.64 
AY745218-1|AAU93485.1|  159|Anopheles gambiae cytochrome P450 pr...    24   4.5  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   7.9  

>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 27.1 bits (57), Expect = 0.64
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 578 LVGSGLALPLALLKSMGDGNHSPSGGPYAPLPRKAIKKNS 459
           LV   L L L L ++ G    +PSG  Y P+P + +++ +
Sbjct: 6   LVSCLLLLQLVLTQADGGSFLAPSGSNYCPIPLEVLEQEN 45


>AY745218-1|AAU93485.1|  159|Anopheles gambiae cytochrome P450
           protein.
          Length = 159

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 10/29 (34%), Positives = 22/29 (75%)
 Frame = +1

Query: 187 T*SKITFMQLLLQYAVGRAPLAANVHKRS 273
           T +++T+M+L+L+ ++   P+AA V +R+
Sbjct: 48  TLNRLTYMELVLKESLRLLPIAAVVGRRT 76


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 502 PPDGEWLPSPMDFSNAKG 555
           PPD  W P  + F+NA G
Sbjct: 104 PPDKVWKPDIVLFNNADG 121


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,351
Number of Sequences: 2352
Number of extensions: 17596
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)