Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10e07f
         (622 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.1  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.1  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   3.6  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = +1

Query: 340 FLRMLKSLIVPLLVSSIV----SAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLG 492
           F R  K L+V   V  ++      IG +    +    L A ++Y+ TTV  V++G
Sbjct: 52  FFRDHKLLLVLFRVLGVMPIQRGEIGRITFGWTSIPMLYAYVFYVVTTVLVVLVG 106


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = +1

Query: 340 FLRMLKSLIVPLLVSSIV----SAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLG 492
           F R  K L+V   V  ++      IG +    +    L A ++Y+ TTV  V++G
Sbjct: 52  FFRDHKLLLVLFRVLGVMPIQRGEIGRITFGWTSIPMLYAYVFYVVTTVLVVLVG 106


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = +1

Query: 340 FLRMLKSLIVPLLVSSIV----SAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLG 492
           F R  K L+V   V  ++      IG +    +    L A ++Y+ TTV  V++G
Sbjct: 52  FFRDHKLLLVLFRVLGVMPIQRGEIGRITFGWTSIPMLYAYVFYVVTTVLVVLVG 106


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 569 PKTPSLPIHYWI 604
           P T ++PIH WI
Sbjct: 534 PLTDTIPIHVWI 545


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,178
Number of Sequences: 336
Number of extensions: 3359
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)