Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10e07f
         (622 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   1.9  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    25   1.9  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   2.6  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 156 IAENATAIQS*GVSEVHTGESTHHPDG 236
           +  N T +Q   V +V   E +H PDG
Sbjct: 84  MVSNLTDLQVANVDDVEDSEGSHEPDG 110


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 14/57 (24%), Positives = 32/57 (56%)
 Frame = -2

Query: 216 ILPYELRTRLTIELQWHFRLSSFVLILETKRPYHIQLDLVH*ARHHYYRSILFYIWS 46
           IL  +L   + ++L W FR+S  ++++      +I + L+  +R    R+++ Y++S
Sbjct: 379 ILLQQLSAAMKLKLSWVFRVSDILILVHFMLDPYIYV-LLKKSRRSDLRTMIRYMFS 434


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 199 KFIRENLLTILTVVGVAAGTLL 264
           +FIR  +LT++  +G A G L+
Sbjct: 3   QFIRSRILTVIIFIGAAHGLLV 24


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,363
Number of Sequences: 2352
Number of extensions: 14324
Number of successful extensions: 54
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)