Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e07f
(622 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43282-3|AAA83614.3| 499|Caenorhabditis elegans Glutamate trans... 117 6e-27
U51998-3|AAL00857.1| 503|Caenorhabditis elegans Glutamate trans... 108 4e-24
D86741-1|BAA21840.1| 503|Caenorhabditis elegans glutamate trans... 108 4e-24
D86740-1|BAA13164.1| 503|Caenorhabditis elegans glutamate trans... 108 4e-24
U35250-1|AAB41909.1| 503|Caenorhabditis elegans CeGlt-2 protein. 107 8e-24
U51998-4|AAL00858.1| 492|Caenorhabditis elegans Glutamate trans... 105 2e-23
U35250-2|AAB41910.1| 492|Caenorhabditis elegans CeGlt-1 protein. 104 4e-23
U58746-1|AAB00621.2| 558|Caenorhabditis elegans Glutamate trans... 100 2e-21
Z99277-1|CAB16485.1| 491|Caenorhabditis elegans Hypothetical pr... 96 2e-20
AF125964-9|AAD14749.2| 523|Caenorhabditis elegans Glutamate tra... 82 4e-16
Z68879-3|CAA93084.1| 532|Caenorhabditis elegans Hypothetical pr... 79 3e-15
U41270-1|AAA82439.2| 411|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF098996-4|AAC68705.1| 888|Caenorhabditis elegans Hypothetical ... 27 8.2
>U43282-3|AAA83614.3| 499|Caenorhabditis elegans Glutamate
transporter family protein4 protein.
Length = 499
Score = 117 bits (282), Expect = 6e-27
Identities = 56/116 (48%), Positives = 80/116 (68%)
Frame = +1
Query: 199 KFIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLL 378
K +ENLL + TV+GV G LG LR WSKR + Y +FPG+LF++MLK LI+P++
Sbjct: 3 KLSKENLLLLFTVLGVVVGIGLGFSLRDPSKAWSKRHLSYLRFPGDLFVQMLKMLILPMI 62
Query: 379 VSSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPGSNSKGNEE 546
+SSI++++ SLD +G++G+ ++IYY TT AV LGI LV+ IKPG + N E
Sbjct: 63 MSSIITSLASLDSGTAGRLGMVSMIYYTLTTFFAVFLGIVLVSVIKPGKWTTTNIE 118
>U51998-3|AAL00857.1| 503|Caenorhabditis elegans Glutamate
transporter family protein1, isoform a protein.
Length = 503
Score = 108 bits (259), Expect = 4e-24
Identities = 54/116 (46%), Positives = 74/116 (63%)
Frame = +1
Query: 175 QFNRKACPKFIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRML 354
+ N++ +IR+NLL +LTV V G L CG G Q S +++MY FPGEL + ML
Sbjct: 6 RINKEIMVSWIRKNLLLVLTVSSVVLGAL--CGFLLRGLQLSPQNIMYISFPGELLMHML 63
Query: 355 KSLIVPLLVSSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPG 522
K +I+PL++SS++S + LD SGK+G A+ YYM TT AV+ GI LV I PG
Sbjct: 64 KMMILPLIMSSLISGLAQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPG 119
>D86741-1|BAA21840.1| 503|Caenorhabditis elegans glutamate
transporter protein.
Length = 503
Score = 108 bits (259), Expect = 4e-24
Identities = 54/116 (46%), Positives = 74/116 (63%)
Frame = +1
Query: 175 QFNRKACPKFIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRML 354
+ N++ +IR+NLL +LTV V G L CG G Q S +++MY FPGEL + ML
Sbjct: 6 RINKEIMVSWIRKNLLLVLTVSSVVLGAL--CGFLLRGLQLSPQNIMYISFPGELLMHML 63
Query: 355 KSLIVPLLVSSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPG 522
K +I+PL++SS++S + LD SGK+G A+ YYM TT AV+ GI LV I PG
Sbjct: 64 KMMILPLIMSSLISGLAQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPG 119
>D86740-1|BAA13164.1| 503|Caenorhabditis elegans glutamate
transporter protein.
Length = 503
Score = 108 bits (259), Expect = 4e-24
Identities = 54/116 (46%), Positives = 74/116 (63%)
Frame = +1
Query: 175 QFNRKACPKFIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRML 354
+ N++ +IR+NLL +LTV V G L CG G Q S +++MY FPGEL + ML
Sbjct: 6 RINKEIMVSWIRKNLLLVLTVSSVVLGAL--CGFLLRGLQLSPQNIMYISFPGELLMHML 63
Query: 355 KSLIVPLLVSSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPG 522
K +I+PL++SS++S + LD SGK+G A+ YYM TT AV+ GI LV I PG
Sbjct: 64 KMMILPLIMSSLISGLAQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPG 119
>U35250-1|AAB41909.1| 503|Caenorhabditis elegans CeGlt-2 protein.
Length = 503
Score = 107 bits (256), Expect = 8e-24
Identities = 54/116 (46%), Positives = 73/116 (62%)
Frame = +1
Query: 175 QFNRKACPKFIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRML 354
+ N++ +IR+NLL +LTV V G L CG G Q S +++MY FPGEL + ML
Sbjct: 6 RINKEIMVSWIRKNLLLVLTVSSVVLGAL--CGFLLRGLQLSPQNIMYISFPGELLMHML 63
Query: 355 KSLIVPLLVSSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPG 522
K +I PL++SS++S + LD SGK+G A+ YYM TT AV+ GI LV I PG
Sbjct: 64 KMMIPPLIMSSLISGLAQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPG 119
>U51998-4|AAL00858.1| 492|Caenorhabditis elegans Glutamate
transporter family protein1, isoform b protein.
Length = 492
Score = 105 bits (253), Expect = 2e-23
Identities = 53/107 (49%), Positives = 70/107 (65%)
Frame = +1
Query: 202 FIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLLV 381
+IR+NLL +LTV V G L CG G Q S +++MY FPGEL + MLK +I+PL++
Sbjct: 4 WIRKNLLLVLTVSSVVLGAL--CGFLLRGLQLSPQNIMYISFPGELLMHMLKMMILPLIM 61
Query: 382 SSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPG 522
SS++S + LD SGK+G A+ YYM TT AV+ GI LV I PG
Sbjct: 62 SSLISGLAQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPG 108
>U35250-2|AAB41910.1| 492|Caenorhabditis elegans CeGlt-1 protein.
Length = 492
Score = 104 bits (250), Expect = 4e-23
Identities = 53/107 (49%), Positives = 69/107 (64%)
Frame = +1
Query: 202 FIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLLV 381
+IR+NLL +LTV V G L CG G Q S +++MY FPGEL + MLK +I PL++
Sbjct: 4 WIRKNLLLVLTVSSVVLGAL--CGFLLRGLQLSPQNIMYISFPGELLMHMLKMMIPPLIM 61
Query: 382 SSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPG 522
SS++S + LD SGK+G A+ YYM TT AV+ GI LV I PG
Sbjct: 62 SSLISGLAQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPG 108
>U58746-1|AAB00621.2| 558|Caenorhabditis elegans Glutamate
transporter family protein6 protein.
Length = 558
Score = 99.5 bits (237), Expect = 2e-21
Identities = 49/116 (42%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
Frame = +1
Query: 199 KFIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLL 378
+F REN L ++T+ V G +LG GLR S+ + FPGE+F+++LK +I+PL+
Sbjct: 11 QFCRENTLLVMTMFSVFLGVVLGFGLRPLN--LSQETLQLINFPGEIFMQVLKMMILPLI 68
Query: 379 VSSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPGSNS-KGNE 543
SS++SA+ +D SG++G ++YY++T V A +LGI LVT I PG S KG +
Sbjct: 69 FSSLISALAQMDAKESGQMGASTVLYYLSTAVLATILGIFLVTVIHPGDPSIKGTD 124
>Z99277-1|CAB16485.1| 491|Caenorhabditis elegans Hypothetical
protein Y53C12A.2 protein.
Length = 491
Score = 95.9 bits (228), Expect = 2e-20
Identities = 45/107 (42%), Positives = 73/107 (68%)
Frame = +1
Query: 202 FIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLLV 381
++ +N+L ++T+ G+ G ++G LR + S + Y FPGELF+ MLK++++PL+
Sbjct: 15 WLTKNMLLLMTMAGIVMGVIIGGVLRTADP--SPDVIRYVGFPGELFMNMLKAMVLPLIA 72
Query: 382 SSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPG 522
+SIVS + LD SG++G RA++YY TT AV+LGI +V+ I+PG
Sbjct: 73 ASIVSGLSQLDGKTSGRLGSRAVMYYAITTTHAVILGIIVVSIIQPG 119
>AF125964-9|AAD14749.2| 523|Caenorhabditis elegans Glutamate
transporter family protein7 protein.
Length = 523
Score = 81.8 bits (193), Expect = 4e-16
Identities = 39/106 (36%), Positives = 68/106 (64%)
Frame = +1
Query: 205 IRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLLVS 384
++E+ L + T++ V G G LR + R+++ FPGE+F+++LK +++PL+ S
Sbjct: 6 MKESQLLVFTLIAVGIGFASGILLRQFDLSDNARNLV--GFPGEIFMQVLKLMVLPLIFS 63
Query: 385 SIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPG 522
S++S++G +D S SGK+ AI YY+TT + A +G+A+V PG
Sbjct: 64 SLISSLGQMDASRSGKMSFIAIAYYLTTVIIASCIGVAMVFLFHPG 109
>Z68879-3|CAA93084.1| 532|Caenorhabditis elegans Hypothetical
protein K08F4.4 protein.
Length = 532
Score = 78.6 bits (185), Expect = 3e-15
Identities = 38/106 (35%), Positives = 67/106 (63%)
Frame = +1
Query: 205 IRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLLVS 384
++++LL +LT+ V G +LG +R S + FPGE+F+++++ +I+PL++S
Sbjct: 3 MKKDLLLVLTIESVVLGVVLGFVIRPFNP--SNDTISLIGFPGEIFMQIVEMMILPLIMS 60
Query: 385 SIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPG 522
S++SA+ + + ++G+ IIYYM TT A GI LV++I PG
Sbjct: 61 SVISALAQVRARDARRIGIVTIIYYMITTFLATFTGIILVSSIHPG 106
>U41270-1|AAA82439.2| 411|Caenorhabditis elegans Hypothetical
protein AH9.1 protein.
Length = 411
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = -3
Query: 620 KTFLNKSNNVSEVRVSLVTI---FVVLSSSFPLELLPGLMVVTKAIPNMTAQTVV 465
K F N S R L+ + F+ L FP L VVT A+ N T T+V
Sbjct: 163 KFFQNNETKPSRRRTMLIIVMIYFIALMIYFPSVFQKKLGVVTDALTNKTIYTIV 217
>AF098996-4|AAC68705.1| 888|Caenorhabditis elegans Hypothetical
protein T11F1.8 protein.
Length = 888
Score = 27.5 bits (58), Expect = 8.2
Identities = 8/28 (28%), Positives = 21/28 (75%)
Frame = -2
Query: 198 RTRLTIELQWHFRLSSFVLILETKRPYH 115
+ R+T++++ ++ + VL+ +T+RP+H
Sbjct: 257 KRRVTMDIRENYGMKRLVLLRQTRRPFH 284
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,743,716
Number of Sequences: 27780
Number of extensions: 321132
Number of successful extensions: 860
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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