Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e06r
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69360-9|CAN86601.1| 296|Caenorhabditis elegans Hypothetical pr... 171 4e-43
Z69360-8|CAA93284.1| 297|Caenorhabditis elegans Hypothetical pr... 171 4e-43
U88173-10|AAK21389.3| 390|Caenorhabditis elegans Hypothetical p... 63 2e-10
Z92813-3|CAB07287.1| 621|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical p... 29 2.6
>Z69360-9|CAN86601.1| 296|Caenorhabditis elegans Hypothetical
protein F25H8.1b protein.
Length = 296
Score = 171 bits (416), Expect = 4e-43
Identities = 79/178 (44%), Positives = 117/178 (65%), Gaps = 2/178 (1%)
Frame = -3
Query: 598 IIIDLSFGHLMIEKDRFKVIKQILRCYSINRRSEQPLHFHITSFGEKSRN--DMSRHNGY 425
I +D+SF LMIEKD+ + ++QI CY+ NR S P FH+ F SR D + HN
Sbjct: 88 IALDMSFDDLMIEKDQKRTVQQIGWCYTANRHSPDPFQFHVVGFDGPSRKIYDGNEHN-- 145
Query: 424 ENWDIAFHEQPYLEVFPKEKLVYLTSESENIIESFDDDTYYIIGGLVDHNQYKGVCHNIS 245
N DI H++ +F E++VYLTSESEN++ DD Y+IGG+VDHN KG+C+ I+
Sbjct: 146 LNQDIHLHQEKLENLFKPEEIVYLTSESENVLSDLDDTKVYVIGGIVDHNSQKGLCYRIA 205
Query: 244 VEQGIRHGRLPLDKYINMKTRKVLTIDHVFEIMLKISEGLTWQETLIRVLPVRKGAHI 71
E+G H +LPLD+++ MK+R+VLTI+ V+EI++ S W++ L+ ++P RK A +
Sbjct: 206 QEKGFGHAKLPLDEHLLMKSRRVLTINQVYEILVHYSVHKNWKDALLSIIPERKNAQL 263
>Z69360-8|CAA93284.1| 297|Caenorhabditis elegans Hypothetical
protein F25H8.1a protein.
Length = 297
Score = 171 bits (416), Expect = 4e-43
Identities = 79/178 (44%), Positives = 117/178 (65%), Gaps = 2/178 (1%)
Frame = -3
Query: 598 IIIDLSFGHLMIEKDRFKVIKQILRCYSINRRSEQPLHFHITSFGEKSRN--DMSRHNGY 425
I +D+SF LMIEKD+ + ++QI CY+ NR S P FH+ F SR D + HN
Sbjct: 89 IALDMSFDDLMIEKDQKRTVQQIGWCYTANRHSPDPFQFHVVGFDGPSRKIYDGNEHN-- 146
Query: 424 ENWDIAFHEQPYLEVFPKEKLVYLTSESENIIESFDDDTYYIIGGLVDHNQYKGVCHNIS 245
N DI H++ +F E++VYLTSESEN++ DD Y+IGG+VDHN KG+C+ I+
Sbjct: 147 LNQDIHLHQEKLENLFKPEEIVYLTSESENVLSDLDDTKVYVIGGIVDHNSQKGLCYRIA 206
Query: 244 VEQGIRHGRLPLDKYINMKTRKVLTIDHVFEIMLKISEGLTWQETLIRVLPVRKGAHI 71
E+G H +LPLD+++ MK+R+VLTI+ V+EI++ S W++ L+ ++P RK A +
Sbjct: 207 QEKGFGHAKLPLDEHLLMKSRRVLTINQVYEILVHYSVHKNWKDALLSIIPERKNAQL 264
>U88173-10|AAK21389.3| 390|Caenorhabditis elegans Hypothetical
protein F46F11.10 protein.
Length = 390
Score = 63.3 bits (147), Expect = 2e-10
Identities = 45/184 (24%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Frame = -3
Query: 598 IIIDLSFGHLMIEKDRFKVIKQILRCYSINRRSEQPLHFHITSFGEKSRN----DMSRHN 431
+ +D F + + R Q+ + NRR+ P H ++ K+ + + S+
Sbjct: 168 LAVDCQFLSRLSPRGRGLTALQLQYLITENRRNPDPFRLHFVNYDSKNSSIQDLEKSKLQ 227
Query: 430 GYENWDI--AFHEQPYLEVFPK--EKLVYLTSESENIIESFDDDTYYIIGGLVDHNQYKG 263
+ + LE + + ++YL+ ++ +ES DDD Y+IGG+VD G
Sbjct: 228 SIRKSHVFNPIVTENGLETYENHSKNVIYLSPDATEELESVDDDKIYVIGGIVDRVPEPG 287
Query: 262 VCHNISVE----QGIRHGRLPLDKYINMKT-RKVLTIDHVFEIMLKISEGLTWQETLIRV 98
+ + S+E G+ +LP+D+Y++ K+ K LT+ V EI+ +++ W++ +
Sbjct: 288 IPKHASLEASQSAGVFARKLPIDRYVDFKSGSKFLTLLAVAEILRQVNIHGDWKKAMKVA 347
Query: 97 LPVR 86
+PVR
Sbjct: 348 IPVR 351
>Z92813-3|CAB07287.1| 621|Caenorhabditis elegans Hypothetical
protein T28A8.3 protein.
Length = 621
Score = 31.1 bits (67), Expect = 0.86
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3
Query: 409 AFHEQPYLEVFPKEKLVYLTSESENIIESFDDDTYYIIGGLVD 281
A +E P +F + + YL S+ E I+E DDD Y G+V+
Sbjct: 392 AVNEDPEHRLFDESHIDYLQSDEEMILEDTDDDVDY--AGMVE 432
>Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = -3
Query: 403 HEQPYLEVFPKEKLVYLTSESENIIESFDDDT---YYIIG---GLVDHNQYKGVCHNISV 242
+E P+L F +K + TS N+ S D+D+ ++G G V + Y G+C+
Sbjct: 640 YESPFLNFFQSQKWLLSTSNIPNMTNSIDEDSSIDKIMLGGSFGAVAQDGY-GICYRFGG 698
Query: 241 EQGI 230
Q I
Sbjct: 699 NQAI 702
>Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = -3
Query: 403 HEQPYLEVFPKEKLVYLTSESENIIESFDDDT---YYIIG---GLVDHNQYKGVCHNISV 242
+E P+L F +K + TS N+ S D+D+ ++G G V + Y G+C+
Sbjct: 640 YESPFLNFFQSQKWLLSTSNIPNMTNSIDEDSSIDKIMLGGSFGAVAQDGY-GICYRFGG 698
Query: 241 EQGI 230
Q I
Sbjct: 699 NQAI 702
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,118,565
Number of Sequences: 27780
Number of extensions: 290546
Number of successful extensions: 640
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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