Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e04r
(794 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6LC52 Cluster: Putative uncharacterized protein; n=1; ... 36 1.5
UniRef50_Q97P79 Cluster: Preprotein translocase SecY family prot... 34 3.6
UniRef50_Q41CN4 Cluster: Sensor protein; n=1; Exiguobacterium si... 34 3.6
UniRef50_Q1VJE3 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
UniRef50_Q00U76 Cluster: Chromosome 16 contig 1, DNA sequence; n... 34 3.6
UniRef50_A2DN19 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
UniRef50_Q56B16 Cluster: Cell surface antigen Sca13; n=5; Ricket... 34 4.7
UniRef50_Q7QP93 Cluster: GLP_398_10339_13323; n=2; Eukaryota|Rep... 34 4.7
UniRef50_Q7RPG0 Cluster: Von Willebrand factor type A domain, pu... 33 6.2
UniRef50_Q94YZ8 Cluster: Orf748; n=1; Pylaiella littoralis|Rep: ... 33 8.3
UniRef50_Q22416 Cluster: Putative uncharacterized protein T12A2.... 33 8.3
>UniRef50_A6LC52 Cluster: Putative uncharacterized protein; n=1;
Parabacteroides distasonis ATCC 8503|Rep: Putative
uncharacterized protein - Parabacteroides distasonis
(strain ATCC 8503 / DSM 20701 / NCTC11152)
Length = 718
Score = 35.5 bits (78), Expect = 1.5
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Frame = -3
Query: 543 EFRHLDFADRRSDSETLFDNRSSRREI-----RNKLTEGIRVGDVSRNRMAV-RNGRNYF 382
+ RH FA +D ++L D+ SRR + R +R D+ +A+ R G Y+
Sbjct: 532 QIRHASFAATVNDLQSLPDDNESRRFLCFEATRIDYQSPVRHADIYAQALALFRRGEKYW 591
Query: 381 FSGGDSETHSRERSTIQKEIPIE 313
FSG D + T ++ P E
Sbjct: 592 FSGEDIRKINENNETFRQRSPEE 614
>UniRef50_Q97P79 Cluster: Preprotein translocase SecY family
protein; n=3; Streptococcus pneumoniae|Rep: Preprotein
translocase SecY family protein - Streptococcus
pneumoniae
Length = 405
Score = 34.3 bits (75), Expect = 3.6
Identities = 21/100 (21%), Positives = 47/100 (47%)
Frame = +2
Query: 50 RDYTIIEISNEEYVTLSIIFQILSFYNKLLISYSNLISFGIEVEDHQRVFIIFLFSCPLS 229
R +I + +++ I++Q+ SF +L L S IE++D +++++ L + S
Sbjct: 61 RSLSIFSVGLSPWMSAMILWQMFSFSKRL-----GLTSTSIEIQDRRKMYLTLLIAVIQS 115
Query: 230 LNICMRIPHK*IPCKVYNIVCQFI*AFVSIGISFWIVDLS 349
L + +R+P + + ++ I W+ DL+
Sbjct: 116 LAVSLRLPVQSSYSAILVVLMNTILLIAGTFFLVWLSDLN 155
>UniRef50_Q41CN4 Cluster: Sensor protein; n=1; Exiguobacterium
sibiricum 255-15|Rep: Sensor protein - Exiguobacterium
sibiricum 255-15
Length = 856
Score = 34.3 bits (75), Expect = 3.6
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = -3
Query: 387 YFFSGGDSETHSRERSTIQKEIPIETNAYINWQTILYTLQGIYLCGILMQMFNDNGQENK 208
YF++ +T +E T+ TN Y +WQ++ Y ++G L G + +++
Sbjct: 32 YFYTKSQVQTSRQELLTLNDHRTRATNLYESWQSLQYEMRGFVLLGDEAMLEEIERKKDN 91
Query: 207 KIMKTRWWSSTS 172
+T W+ +
Sbjct: 92 INQQTTWFEKNA 103
>UniRef50_Q1VJE3 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 353
Score = 34.3 bits (75), Expect = 3.6
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +2
Query: 95 LSIIFQILSFYNKLLISYSNLISFGIEVEDHQRVFIIFLFSCPLSLNICMRI 250
L+I +L+FYNK + Y N++ F + V + F+IF+F PL L I +I
Sbjct: 222 LTICNYLLTFYNKNINHYKNVVFFSVFV-FLIKPFLIFVFLVPLFLLITKKI 272
>UniRef50_Q00U76 Cluster: Chromosome 16 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 16 contig 1, DNA
sequence - Ostreococcus tauri
Length = 65
Score = 34.3 bits (75), Expect = 3.6
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = -3
Query: 582 SREERQQMKVRRIEFRHLDFADRRSDSETLFDNRSSRREIR 460
S + R +VRR+E RHL R+ TLF+ RS+ R +R
Sbjct: 12 STDARVPRRVRRLESRHLASRRRKESFATLFNARSNARRLR 52
>UniRef50_A2DN19 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1012
Score = 34.3 bits (75), Expect = 3.6
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +2
Query: 416 LRDTSPTRIPSVSLFLISRLELRLSKRVSESLLRSAKSKCLNSIRRTFICCLSSRLSIRE 595
L TSP +IP F+ S ++L L +V +++ SA +C+N R IC + ++ +
Sbjct: 714 LTKTSPGKIPD---FVTSWIQLVLHPKVFGAMIESADLECVNFCLRFIICIIKLAINFPD 770
Query: 596 G 598
G
Sbjct: 771 G 771
>UniRef50_Q56B16 Cluster: Cell surface antigen Sca13; n=5; Rickettsia
bellii|Rep: Cell surface antigen Sca13 - Rickettsia
bellii
Length = 1981
Score = 33.9 bits (74), Expect = 4.7
Identities = 18/75 (24%), Positives = 38/75 (50%)
Frame = -3
Query: 504 SETLFDNRSSRREIRNKLTEGIRVGDVSRNRMAVRNGRNYFFSGGDSETHSRERSTIQKE 325
++ L D+ +S + ++ EG GD +++ +G++ FSG +S + S ST+
Sbjct: 848 TDDLGDSTNSLKTVQFSSVEGTVKGDTYSENVSIDSGKSAIFSGYNSRSTSVPSSTVGGV 907
Query: 324 IPIETNAYINWQTIL 280
+ N+QT++
Sbjct: 908 TVPRSTPQFNYQTVV 922
>UniRef50_Q7QP93 Cluster: GLP_398_10339_13323; n=2; Eukaryota|Rep:
GLP_398_10339_13323 - Giardia lamblia ATCC 50803
Length = 994
Score = 33.9 bits (74), Expect = 4.7
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 62 IIEISNEEYVTLSIIFQILSFYNKLLISYSNLISFGIEVEDHQRVF 199
++ + N I+ LSF + +SY+NLI F + V D +R+F
Sbjct: 691 LVTLLNTVMPIFDIVAATLSFVKSIYVSYANLIDFKVLVPDLRRIF 736
>UniRef50_Q7RPG0 Cluster: Von Willebrand factor type A domain,
putative; n=5; Plasmodium (Vinckeia)|Rep: Von Willebrand
factor type A domain, putative - Plasmodium yoelii
yoelii
Length = 1125
Score = 33.5 bits (73), Expect = 6.2
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -2
Query: 361 NSFPGKVNNPKRNSDRNERLYKLANYIIHLARNLLVRNSHADVQ 230
N G NN S+ ++R + N II L+RNLLV+N + +V+
Sbjct: 47 NDQNGNTNNLGSLSNNDKRFSGILNNIIELSRNLLVKNENKNVK 90
>UniRef50_Q94YZ8 Cluster: Orf748; n=1; Pylaiella littoralis|Rep:
Orf748 - Pylaiella littoralis
Length = 748
Score = 33.1 bits (72), Expect = 8.3
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 107 FQILSFYNKLLISYSNLISFGIEVEDHQRVFIIFLFSCPLSLNICMRIPHK 259
+QI+ +YN++ + SN SF + QR+ I SC L+L +R+ K
Sbjct: 569 YQIVDYYNRVYMGLSNYYSFADDYSLLQRIHYILKTSCFLTLASKLRLGTK 619
>UniRef50_Q22416 Cluster: Putative uncharacterized protein T12A2.6;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein T12A2.6 - Caenorhabditis elegans
Length = 689
Score = 33.1 bits (72), Expect = 8.3
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 2/147 (1%)
Frame = -3
Query: 606 KFIPSRILSREER-QQMKVRRIEFRHLDFADRRSDSETLFDNRSSRREIRNKLTEGIRVG 430
KF PS ++ + + ++ + F ++F+ + S TL + + + NK + V
Sbjct: 395 KFTPSNMIFESTKTKSLETMQTFFGAINFS-KTSGFGTLMEVLAKEKIRLNKFRD--YVS 451
Query: 429 DVSRNRMAVRNGRNYFFSGGDSETHSRERSTIQKEIPI-ETNAYINWQTILYTLQGIYLC 253
+ +R+ VRN R YF E + RS +Q I TN +N IL T++ IY
Sbjct: 452 KLDDDRILVRNLRKYFDVTTTEEIGKKVRSALQSIRDISSTNEDLN--EILKTVRDIYRS 509
Query: 252 GILMQMFNDNGQENKKIMKTRWWSSTS 172
+F +K RW S S
Sbjct: 510 SNSASIFMLLSDISKLSRDARWLDSWS 536
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,290,767
Number of Sequences: 1657284
Number of extensions: 13982340
Number of successful extensions: 36197
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 34804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36190
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -