Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10e04r
         (794 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       25   0.61 
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    25   1.1  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    25   1.1  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    23   4.3  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   4.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   10.0 
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    21   10.0 
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   10.0 
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   10.0 

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 597 PSRILSREERQQMKVRRIEFRHLDFADRRSD 505
           P R+L   E+ ++K   ++F  LD ADR  D
Sbjct: 331 PGRLLDFVEKGRVKFSSVQFLVLDEADRMLD 361


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 361 NSFPGKVNNPKRNSDRNERLYKLANYI 281
           N++   ++N   N++ N++LY   NYI
Sbjct: 87  NNYISNISNYNNNNNYNKKLYYNINYI 113


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 361 NSFPGKVNNPKRNSDRNERLYKLANYI 281
           N++   ++N   N++ N++LY   NYI
Sbjct: 325 NNYISNISNYNNNNNYNKKLYYNINYI 351


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -2

Query: 361 NSFPGKVNNPKRNSDRNERLYKLANYI 281
           N++   ++N   +++ N++LY   NYI
Sbjct: 87  NNYISNISNYNNDNNYNKKLYYNINYI 113


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 393 RNYFFSGGDSETHSRERSTIQKEIPIETNA 304
           ++Y   G  +    R+ STI+ E   E+NA
Sbjct: 204 KSYVLEGPRNGKRKRKSSTIENESETESNA 233


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 137 LISYSNLISFGIEVEDHQRV 196
           L+  S+L++FG  +ED  RV
Sbjct: 6   LVLLSSLVTFGWTLEDAPRV 25


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 340 NNPKRNSDRNERLYKLANYI 281
           NN   N+  N++LY   NYI
Sbjct: 314 NNNNYNNYNNKKLYYNINYI 333


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 137 LISYSNLISFGIEVEDHQRV 196
           L+  S+L++FG  +ED  RV
Sbjct: 6   LVLLSSLVTFGWTLEDAPRV 25


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 12/51 (23%), Positives = 23/51 (45%)
 Frame = +2

Query: 527 SKCLNSIRRTFICCLSSRLSIREGINFEIVSSLLISRRTEKIRDRRLPSES 679
           S  L   + T +C  S+       +NF + +S +I    +++   R+P  S
Sbjct: 18  SPFLGGPQLTDVCSASNGELFLALLNFFVATSPVIGEPCQRVHSSRIPDLS 68


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,674
Number of Sequences: 438
Number of extensions: 5037
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)