Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10e04f
         (611 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   0.38 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.50 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   2.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   2.7  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 118 LFCRSQNEVLLMDDKSVVVGNHQLYFN-KASGL*MVPTLTF 237
           + C+ Q    LM   S ++GNHQL +N    G  + P LT+
Sbjct: 85  VLCKRQQYCQLM---SKLLGNHQLVYNCHTFGRFLAPNLTY 122


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.0 bits (52), Expect = 0.50
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 82  GVYYWRLSRYFSLFCRSQNEVLLMDDKSVVVG 177
           G+Y   +  +FS+ C  Q+E LL D    V G
Sbjct: 339 GLYVLNMEHFFSVKCSIQSESLLNDILFPVAG 370


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +3

Query: 288 RDIRRYIVQNRNQLNRQLVEDFRNNRSKQNTRQFSVDSLVRA 413
           R  R  I +N N   RQ+   F+N R K    Q +  S  R+
Sbjct: 115 RPRRIQIAENLNLSERQIKIWFQNRRMKHKKEQMNKVSTPRS 156


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +3

Query: 288 RDIRRYIVQNRNQLNRQLVEDFRNNRSKQNTRQFSVDSLVRA 413
           R  R  I +N N   RQ+   F+N R K    Q +  S  R+
Sbjct: 106 RPRRIQIAENLNLSERQIKIWFQNRRMKHKKEQMNKVSTPRS 147


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,996
Number of Sequences: 336
Number of extensions: 2925
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)