Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e04f
(611 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_29745| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.04) 33 0.18
SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_51317| Best HMM Match : E-MAP-115 (HMM E-Value=0.58) 32 0.32
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 32 0.42
SB_29515| Best HMM Match : TolA (HMM E-Value=0.031) 31 0.74
SB_14923| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_51224| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2) 30 1.7
SB_49114| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_43856| Best HMM Match : Laminin_I (HMM E-Value=0.057) 29 2.2
SB_31039| Best HMM Match : Fibrinogen_C (HMM E-Value=4.2e-39) 29 3.0
SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_242| Best HMM Match : AFP (HMM E-Value=0.45) 29 3.9
SB_64| Best HMM Match : Rho_N (HMM E-Value=1.8e-07) 29 3.9
SB_40012| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 28 5.2
SB_28638| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 28 5.2
SB_9895| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_52319| Best HMM Match : Rho_N (HMM E-Value=1.8e-07) 28 6.9
SB_34021| Best HMM Match : Zip (HMM E-Value=0) 28 6.9
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 28 6.9
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3) 28 6.9
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 27 9.1
SB_33280| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28) 27 9.1
SB_4635| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1161
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 426 ERHRQRSNGINDRRVLREVTERDVRFYRSIERNNKNLEVRRETVSKSLQQ 575
E+ ++ +N R+ L E RSIER+N+ L+V +E + + LQ+
Sbjct: 510 EQDKELHEALNSRKELETTVEEMNVKIRSIERDNRGLKVEKEDLERVLQE 559
>SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 33.1 bits (72), Expect = 0.18
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++TSTTS TP + + + Y T TS T + +T +++T
Sbjct: 51 TSTTSYTSTTSYTSTPSYTSTTSY---TSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTST 107
Query: 182 TSFTST 199
TS+TST
Sbjct: 108 TSYTST 113
Score = 31.9 bits (69), Expect = 0.42
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++TSTTS TP + + + Y T TS+Y T + +T+ +++T
Sbjct: 9 TSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTS----TSSY-----TSTTSYTSTTSYTST 59
Query: 182 TSFTST 199
TS+TST
Sbjct: 60 TSYTST 65
Score = 31.1 bits (67), Expect = 0.74
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++TSTTS T + + S Y T TS T + +T+ +++T
Sbjct: 21 TSTPSYTSTTSYTSTTSYTSTSSYTSTTSYTSTTSYTST---TSYTSTPSYTSTTSYTST 77
Query: 182 TSFTST 199
TS+TST
Sbjct: 78 TSYTST 83
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++TSTTS T + + + Y T TS T +T+ +++T
Sbjct: 27 TSTTSYTSTTSYTSTSSYTSTTSYTSTTSYTSTTSYTSTPSYTSTTS---YTSTTSYTST 83
Query: 182 TSFTST 199
TS+TST
Sbjct: 84 TSYTST 89
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++TSTTS T + + Y T TS T + +T+ ++ T
Sbjct: 45 TSTTSYTSTTSYTSTTSYTSTPSY---TSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCT 101
Query: 182 TSFTST 199
TS+TST
Sbjct: 102 TSYTST 107
>SB_29745| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.04)
Length = 1481
Score = 33.1 bits (72), Expect = 0.18
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 11/139 (7%)
Frame = +3
Query: 192 LQQSKRSLD--GTHANIREISENRSLKDRATTHIRDIRRY---------IVQNRNQLNRQ 338
++++K+ D H+ I S N L +RA RD+ R IV N N N++
Sbjct: 758 MEENKKLKDKMDVHSRIIRDSANAVLSERAAIE-RDLARVRKREQDLESIVSNSNVRNKR 816
Query: 339 LVEDFRNNRSKQNTRQFSVDSLVRAELRVERHRQRSNGINDRRVLREVTERDVRFYRSIE 518
L D Q +D L++ + R+E G R V + TE + + +
Sbjct: 817 LELDIEKREVVITKLQADLDQLLQEKTRLESTIHELAG---RSV--DTTEENDTLQKDLS 871
Query: 519 RNNKNLEVRRETVSKSLQQ 575
+ +NL R++++ SLQ+
Sbjct: 872 KLERNLSTLRDSLTLSLQE 890
>SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 32.3 bits (70), Expect = 0.32
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++TSTTS TP + + Y T TS T + +T+ +++T
Sbjct: 45 TSTTSYTSTTSYTPTPSYTPTTSY---TTTTSYTSTTSYTTTTSYTPTTSYTSTTSYTST 101
Query: 182 TSFTST 199
TS+TST
Sbjct: 102 TSYTST 107
Score = 31.1 bits (67), Expect = 0.74
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++TSTTS TP + + Y T TS T + +TT +++T
Sbjct: 21 TSTTSYTSTTSYTPTPSYTPTTSY---TSTTSYTSTTSYTPTPSYTPTTSYTTTTSYTST 77
Query: 182 TSFTST 199
TS+T+T
Sbjct: 78 TSYTTT 83
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++TSTTS T + + + Y T C TS T + +T+ +++T
Sbjct: 117 TSTTSYTSTTSYTSTTSYTSTTSYTCTTSYT--CT-TSYTCTTSYTSTTSYTSTTSYTST 173
Query: 182 TSFTST 199
TS+TST
Sbjct: 174 TSYTST 179
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++T+TTS T + + + Y T TS T +T+ +++T
Sbjct: 75 TSTTSYTTTTSYTPTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTS---YTSTTSYTST 131
Query: 182 TSFTST 199
TS+TST
Sbjct: 132 TSYTST 137
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++TSTTS T + + + Y T TS T +T ++ T
Sbjct: 99 TSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTS---YTCTTSYTCT 155
Query: 182 TSFTST 199
TS+TST
Sbjct: 156 TSYTST 161
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++TSTTS T + + + Y T TS T + +T +++T
Sbjct: 105 TSTTSYTSTTSYTSTTSYTSTTSYT---STTSYTSTTSYTCTTSYTCTTSYTCTTSYTST 161
Query: 182 TSFTST 199
TS+TST
Sbjct: 162 TSYTST 167
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++TSTTS T + + + Y T C TS T + +T+ +++T
Sbjct: 111 TSTTSYTSTTSYTSTTSYTSTTSYTSTTSYT--CT-TSYTCTTSYTCTTSYTSTTSYTST 167
Query: 182 TSFTST 199
TS+TST
Sbjct: 168 TSYTST 173
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
T+ ++TSTTS T + + Y T TS T + +T+ +++T
Sbjct: 69 TTTTSYTSTTSYTTTTSYTPTTSY---TSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTST 125
Query: 182 TSFTST 199
TS+TST
Sbjct: 126 TSYTST 131
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++TSTTS T + + Y T TS T + +T+ ++ T
Sbjct: 129 TSTTSYTSTTSYTCTTSYTCTTSY---TCTTSYTSTTSYTSTTSYTSTTSYTSTTSYTTT 185
Query: 182 TSFTST 199
TS+T+T
Sbjct: 186 TSYTTT 191
>SB_51317| Best HMM Match : E-MAP-115 (HMM E-Value=0.58)
Length = 696
Score = 32.3 bits (70), Expect = 0.32
Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 3/184 (1%)
Frame = +3
Query: 42 KPQNTEHTVTMHNWRLLLAFVAILQPILSFTERSLVNGRQECCGRQPPALLQQSKRSLDG 221
K + E T + N R L+ V + T ++L ++C + ++++ + G
Sbjct: 429 KSASDEKTAS-ENLRAELSIVLQRMQVSKNTIQTLSEDLKKCLREKEALIVEREEYQGQG 487
Query: 222 THANIREISENRSLKDRATTHIRDIRRYIVQN-RNQLNR-QLVEDFRNNRSKQNTRQFSV 395
+R + E LK H + ++ +++ RN+L + Q +ED N F V
Sbjct: 488 NDEELRRVEER--LKGYRVEHDVNQKKTLIEELRNKLRKAQSMEDKEAN----TVAIFDV 541
Query: 396 DSLVRA-ELRVERHRQRSNGINDRRVLREVTERDVRFYRSIERNNKNLEVRRETVSKSLQ 572
V+ + R+ H+Q+ + +R +TERD + ++ + L+ K Q
Sbjct: 542 SLRVKHFKKRLSLHQQK----DFEEKIRRLTERDSQRKGQVDSLKRQLDAETRDKDKWQQ 597
Query: 573 QYET 584
QY T
Sbjct: 598 QYYT 601
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 31.9 bits (69), Expect = 0.42
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++TSTTS TP + + + Y T TS T + +T+ +++T
Sbjct: 153 TSTTSYTSTTSYTSTPSYTSTTSY---TSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTST 209
Query: 182 TSFTST 199
TS+T T
Sbjct: 210 TSYTPT 215
Score = 31.1 bits (67), Expect = 0.74
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++T TTS TP + + + Y T TS T +T+ +++T
Sbjct: 129 TSTTSYTPTTSYTPTPSYTSTTSYTSTTSYTSTTSYTSTPSYTSTTS---YTSTTSYTST 185
Query: 182 TSFTST 199
TS+TST
Sbjct: 186 TSYTST 191
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++TSTTS T + + + Y T TS T +T ++AT
Sbjct: 165 TSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTS---YTPTPSYTAT 221
Query: 182 TSFTST 199
TS+TST
Sbjct: 222 TSYTST 227
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++TSTTS T + + Y T TS T + +T+ +++T
Sbjct: 147 TSTTSYTSTTSYTSTTSYTSTPSY---TSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTST 203
Query: 182 TSFTST 199
TS+TST
Sbjct: 204 TSYTST 209
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
T ++TSTTS T + + + Y T TS T + +T+ +++T
Sbjct: 141 TPTPSYTSTTSYTSTTSYTSTTSYTSTPSYTSTTSYTS---TTSYTSTTSYTSTTSYTST 197
Query: 182 TSFTST 199
TS+TST
Sbjct: 198 TSYTST 203
>SB_29515| Best HMM Match : TolA (HMM E-Value=0.031)
Length = 592
Score = 31.1 bits (67), Expect = 0.74
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +3
Query: 333 RQLVEDFRNNRSKQNTRQFS-VDSLVRAELRVERHRQRSNGINDRRVLREVTERDVRFYR 509
RQ VE R R + +Q + L R L E +R +RR RE ER+ +
Sbjct: 341 RQEVERKRREREEAKRKQLEEAERLERVRLEAEEEMKRRE--EERRKKREEAERERKRKE 398
Query: 510 SIERNNKNLEVRRETVSKSLQQ 575
ERN + E R K +++
Sbjct: 399 EEERNREKQEKARLEREKRMRE 420
>SB_14923| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 354
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +3
Query: 108 ILQPIL-SFTERSLVNGRQE--CCGRQPPALLQQSKRSL-DGTHANIREISENRS 260
+L PIL SF ++ R+ CCG + P LL +S+ + T++ +RE+ RS
Sbjct: 294 LLNPILYSFLKQDFKRARKSLGCCGGKRPRLLNVGSKSVSNSTNSTLRELISLRS 348
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 30.7 bits (66), Expect = 0.97
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 201 SKRSLDGTHANIREISENRSLKDRATTHIRDIRRYIVQNRNQLNRQL--VEDFRNNRSKQ 374
S ++ G I EI + + + H++DIR ++ +L RQ+ + D +NN K+
Sbjct: 1185 SSKAATGYENTISEIKKEKDMLYDEVKHLKDIRAQQLEEIEELKRQIEHMRDVQNNYQKE 1244
>SB_51224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 808
Score = 29.9 bits (64), Expect = 1.7
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Frame = +3
Query: 249 ENRSLKDRATTHIRDIRRYIVQNRNQLNRQLVE--DFRNNRSKQNTRQFSVDSLVRAELR 422
EN K + T + + + + RN++NR +E R +S+ R S+++ + +E +
Sbjct: 685 ENEINKRQLETMKQQLDQKESEYRNEVNRSRLELDSERKTQSELRDRILSLENQINSEAK 744
Query: 423 VERHRQRSNGINDRRVLREVTERDVRFYRSIERNNKNLEVRRETVSKSLQQYETDNVAAS 602
RHR L V+E+ I+RN + R E + K++ Y + AS
Sbjct: 745 --RHRDIL--AQKESELSFVSEQLRTRESEIKRNQEEEVKRAEMLEKAIYSYVSSTKTAS 800
Query: 603 R 605
R
Sbjct: 801 R 801
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.9 bits (64), Expect = 1.7
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Frame = +3
Query: 228 ANIREISENRSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSKQNTRQFSVDSLV 407
A RE+ + R K+R IR R I + R L R+ + R ++
Sbjct: 584 AKAREVRDARE-KERQD-RIRRERERIARER-ALERERERERERERERRRLEYMREQRRR 640
Query: 408 RAE--LRVERHRQRSNGINDRRVLREVTERDVRFYRSIERNNKNLEV-RRETVSKSLQQY 578
+ E R++R +R + RVLRE ER+ R +ER + EV RE + + +
Sbjct: 641 QEEERARLQRELERRRELERLRVLRERREREER--ERLERERREREVLERERLERERAER 698
Query: 579 E 581
E
Sbjct: 699 E 699
>SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2)
Length = 267
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++TSTTS TP + + Y T TS T + +T+ ++ T
Sbjct: 174 TSTTSYTSTTSYTPTPSYTSTPSY---TSTTSYTCTTSYTSTTSYTCTTSYTSTTSYTPT 230
Query: 182 TSFTST 199
TS+TST
Sbjct: 231 TSYTST 236
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++T TTS TP + + + Y T TS T + +T+ ++ T
Sbjct: 150 TSTTSYTPTTSYTPTPSYTSTTSY---TSTTSYTSTTSYTPTPSYTSTPSYTSTTSYTCT 206
Query: 182 TSFTST 199
TS+TST
Sbjct: 207 TSYTST 212
>SB_49114| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 29.5 bits (63), Expect = 2.2
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Frame = +3
Query: 264 KDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSKQNTRQFSV--DSLVRAELR----V 425
+DR T R + I +NR + + + +R + TRQ + R E R +
Sbjct: 7 RDRERTETRQ-GKLIERNRERTETRQGKLIERDRERTETRQGKLIERDRERTETRQGKLI 65
Query: 426 ERHRQRSNGINDRRVLREVTERDVRFYRSIERNNKNLEVRR-ETVSKSLQQYET 584
ER R+R+ + + R+ + R + IER+ + E R+ + + + ++ ET
Sbjct: 66 ERDRERTETRQGKLIERDRERTETRQGKLIERDRERTETRQGKLIERDRERTET 119
Score = 27.5 bits (58), Expect = 9.1
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Frame = +3
Query: 264 KDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSKQNTRQFSV--DSLVRAELR----V 425
+DR T R + I ++R + + + +R + TRQ + R E R +
Sbjct: 37 RDRERTETRQ-GKLIERDRERTETRQGKLIERDRERTETRQGKLIERDRERTETRQGKLI 95
Query: 426 ERHRQRSNGINDRRVLREVTERDVRFYRSIERNNKNLEVRR-ETVSKSLQQYET 584
ER R+R+ + + R+ + R + IER+ + E R+ + + + ++ ET
Sbjct: 96 ERDRERTETRQGKLIERDRERTETRQGKLIERDRERTETRQGKLIERDRERTET 149
Score = 27.5 bits (58), Expect = 9.1
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Frame = +3
Query: 264 KDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSKQNTRQFSV--DSLVRAELR----V 425
+DR T R + I ++R + + + +R + TRQ + R E R +
Sbjct: 52 RDRERTETRQ-GKLIERDRERTETRQGKLIERDRERTETRQGKLIERDRERTETRQGKLI 110
Query: 426 ERHRQRSNGINDRRVLREVTERDVRFYRSIERNNKNLEVRR-ETVSKSLQQYET 584
ER R+R+ + + R+ + R + IER+ + E R+ + + + ++ ET
Sbjct: 111 ERDRERTETRQGKLIERDRERTETRQGKLIERDRERTETRQGKLIERDRERTET 164
Score = 27.5 bits (58), Expect = 9.1
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Frame = +3
Query: 264 KDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSKQNTRQFSV--DSLVRAELR----V 425
+DR T R + I ++R + + + +R + TRQ + R E R +
Sbjct: 67 RDRERTETRQ-GKLIERDRERTETRQGKLIERDRERTETRQGKLIERDRERTETRQGKLI 125
Query: 426 ERHRQRSNGINDRRVLREVTERDVRFYRSIERNNKNLEVRR-ETVSKSLQQYET 584
ER R+R+ + + R+ + R + IER+ + E R+ + + + ++ ET
Sbjct: 126 ERDRERTETRQGKLIERDRERTETRQGKLIERDRERTETRQGKLIERDRERTET 179
>SB_43856| Best HMM Match : Laminin_I (HMM E-Value=0.057)
Length = 976
Score = 29.5 bits (63), Expect = 2.2
Identities = 24/101 (23%), Positives = 43/101 (42%)
Frame = +3
Query: 279 THIRDIRRYIVQNRNQLNRQLVEDFRNNRSKQNTRQFSVDSLVRAELRVERHRQRSNGIN 458
TH I + + + +RQ+ RS+Q + V +R + E+ R R
Sbjct: 249 THQDVILKLREDAKREEDRQVSRAVAEARSEQEEKFREVVEEMRVK---EQDRIRQAVET 305
Query: 459 DRRVLREVTERDVRFYRSIERNNKNLEVRRETVSKSLQQYE 581
+RR++ + +++ NK LE R +S + QYE
Sbjct: 306 ERRIMESQHGSVTQLQQTLSEKNKELEQYRSALSSAKSQYE 346
>SB_31039| Best HMM Match : Fibrinogen_C (HMM E-Value=4.2e-39)
Length = 411
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 345 QQAVDSVGFYSVRYNDGCHVCELSLD 268
+++ SV FY + +DG H+CEL D
Sbjct: 64 EESCTSVNFYKDKDSDGKHICELLTD 89
>SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2956
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 390 SVDSLVRAELRVERHRQRSNGINDRRVLREVTERDVRFYRSIER 521
+V+ LV ELR + H + + D++ E +V F RSI+R
Sbjct: 165 AVEELVNEELRKQNHLYVNVSVGDQQGGEEQNYENVAFIRSIQR 208
>SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1399
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +3
Query: 417 LRVERHRQRSNGINDRRVLREVTERDVRFYRSIERNNKNLEVRRETVSKSLQQYETDNVA 596
L+ +R R+ R LR +TE ++ YRS + +E RR +++ + QY N
Sbjct: 208 LKEDRTHYRNVADELRDKLR-ITEEELERYRSSSEKPQIIEQRRTSITSTASQYSPRN-P 265
Query: 597 ASRTS 611
+ RTS
Sbjct: 266 SLRTS 270
>SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 28.7 bits (61), Expect = 3.9
Identities = 31/120 (25%), Positives = 49/120 (40%)
Frame = +3
Query: 240 EISENRSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSKQNTRQFSVDSLVRAEL 419
E S+ R+ KDR + + + + + RQL E+ R S+ ++ RA
Sbjct: 16 EHSKERTEKDRILKKKMEEQAILREKEEEARRQLQEEQRLRVSRGGEPDHVLELKQRALS 75
Query: 420 RVERHRQRSNGINDRRVLREVTERDVRFYRSIERNNKNLEVRRETVSKSLQQYETDNVAA 599
ER R+ + DRR E D R R E +E R + + QQ + NV +
Sbjct: 76 DYERRRRLIDQEIDRR-QEESRSLDRRQAREWEEAKARIE-RLQQSQMATQQQQRGNVVS 133
>SB_242| Best HMM Match : AFP (HMM E-Value=0.45)
Length = 147
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHR---AYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLW 172
TS ++TSTTS R TP + +Y+ T TS T + +T +
Sbjct: 75 TSTTSYTSTTSYRSTPSYTPTPSYTCTTSYTCTTSYTSTTSYTCTTSYTCTTSYTWITSY 134
Query: 173 SATTSFTST 199
+ TTS+T T
Sbjct: 135 TCTTSYTCT 143
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
TS ++T TTS T + + + Y T TS T + +T+ +++T
Sbjct: 15 TSTTSYTCTTSYTSTTSYTSTTSYT---STTSYTPTTSYTCTTSYTSTTSYTSTTSYTST 71
Query: 182 TSFTST 199
TS+TST
Sbjct: 72 TSYTST 77
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +2
Query: 2 TSEEAFTSTTSQRKTPKHRAYSYYA*LAFITGVCRDTSAYFVVHRTKSC*WTTRVLWSAT 181
T ++TSTTS T + + + Y T C TS T + +T+ +++T
Sbjct: 21 TCTTSYTSTTSYTSTTSYTSTTSYTPTTSYT--CT-TSYTSTTSYTSTTSYTSTTSYTST 77
Query: 182 TSFTST 199
TS+TST
Sbjct: 78 TSYTST 83
>SB_64| Best HMM Match : Rho_N (HMM E-Value=1.8e-07)
Length = 320
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 327 LNRQLVEDFRNNRSKQNTRQFSVDSLVRAELRVERHRQRSN 449
L Q + F NNR Q R S+ VRAEL E+ + +SN
Sbjct: 182 LINQNISAFTNNRPPQPRRGVSISESVRAEL--EKRKAQSN 220
>SB_40012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 399 SLVRAELRVERHRQRSNGINDRRVLREVTERDVRFYRSIERNNKNLEVRRETVSKSLQQ 575
+LVR +R R+ +R V+R ER+V R++ER + RE + ++L++
Sbjct: 144 ALVREVIRRALEREVIRRALEREVIRRALEREV-IRRALEREVIRRALEREVIRRTLER 201
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +3
Query: 213 LDGTHANIREISENRSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSKQN---TR 383
L+G A + +I EN LKD + + + ++ R +R LVE + K+N +R
Sbjct: 96 LNGKCAEVLDILENYLLKDGQDDINTEAKVFYLKMRGDYHRYLVEVAEGDSRKENIEKSR 155
Query: 384 QFSVDSLVRAE 416
+ D+ +AE
Sbjct: 156 EAYKDASAKAE 166
>SB_28638| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 346
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 330 SVGFYSVRYNDGCHVCELSLD 268
SV FY R +DG H+CEL D
Sbjct: 84 SVNFYKDRDSDGKHLCELLTD 104
>SB_9895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1547
Score = 28.3 bits (60), Expect = 5.2
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Frame = +3
Query: 237 REISENRSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSK-----QNTRQFSVDS 401
+E E+ K + HIR +YI + + R+ EDF+ SK + + +F
Sbjct: 1196 KETRESGKAKRKVKIHIR---KYIKDSFKRWYREFREDFKGLMSKLKFPQKKSFRFQQSM 1252
Query: 402 LVRAELRVERHRQRSN---GINDRRVLREVTERDVRFYRSIERN 524
+R + + + N +RR++ V+ VR + SIE N
Sbjct: 1253 KMRIDGKQFMGNYKGNERTAAEERRLMSPVSHHSVRSHASIEDN 1296
>SB_52319| Best HMM Match : Rho_N (HMM E-Value=1.8e-07)
Length = 1458
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +3
Query: 327 LNRQLVEDFRNNRSKQNTRQFSVDSLVRAELRVERHRQRSN 449
L Q + F NNR Q R S+ VRAEL E + +SN
Sbjct: 182 LINQNISAFTNNRPPQPRRGVSISESVRAEL--EERKAQSN 220
>SB_34021| Best HMM Match : Zip (HMM E-Value=0)
Length = 808
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 390 KTGEYFVCFYCF*SLQQAVDSVGFYSVRYNDGCHVCELSLD 268
K + F C +++ SV FY R ++G H+CEL D
Sbjct: 85 KVVDDFACVRECTRAEESCTSVNFYKDRDSNGKHLCELLTD 125
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +3
Query: 285 IRDIRRYIVQNRNQLNRQLVEDFRNNRSKQNTRQFSVDSLVRAELRVERHRQRSNGINDR 464
+R RR +V+ R + R+ R R ++ RQ R + R +HR+R R
Sbjct: 1460 VRRFRRRVVRRRIRRRRRRKRRRRRRRRRRRRRQ---QKRQRRKQRRYQHRRRLIRRLKR 1516
Query: 465 RVLREVTER 491
RVLR + R
Sbjct: 1517 RVLRRLRRR 1525
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 27.9 bits (59), Expect = 6.9
Identities = 24/139 (17%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Frame = +3
Query: 192 LQQSKRSLDGTHANIREISENRSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSK 371
L++S++ + + + E+ E R + + + + RNQ+ ++ +E+ ++ +
Sbjct: 2515 LRESQKQNEDLTSMVNELKEERRNEKQKKEEAEGLVEKLKVQRNQMIKE-IEELKSEKGL 2573
Query: 372 QNTRQFSVDSL--VRAELRV----------ERHRQRSNGINDRRVLREVTERDVRFYRSI 515
+Q D +R E+ V + +++ + ++ +E E+DV R
Sbjct: 2574 LEQKQQMQDEAQKLRNEIEVLKKLHAIALEDANQKSEKELRREKMKKERYEKDVESLRKE 2633
Query: 516 ERNNKNLEVRRETVSKSLQ 572
++KN ++ET+ +S++
Sbjct: 2634 MNDDKNRAYKQETLIQSIK 2652
>SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3)
Length = 189
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/58 (25%), Positives = 22/58 (37%)
Frame = +3
Query: 204 KRSLDGTHANIREISENRSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSKQN 377
KRS D NI I+ N++ + H N N N + + NN + N
Sbjct: 60 KRSADAKLTNILIITNNKNNNNNNNNHHHHHNNINNNNNNNNNNNNINNINNNNNNNN 117
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 27.5 bits (58), Expect = 9.1
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 14/137 (10%)
Frame = +3
Query: 192 LQQSKRSLDGTHANIREISENRSLKDRATTHIRDIRRYIVQNRNQLNRQLVE------DF 353
LQ + LD +A ++E+ E LKD +R + ++ + RQL E +
Sbjct: 905 LQGQREVLDSLNAKVKELEEQLELKDSDLEVLRRDFKEAENSKLETERQLSELSKETCHY 964
Query: 354 RNNRSKQNTR----QFSVDSLVRA--ELRVERHRQRSNGINDRRVLREVTERDVRFYRS- 512
+ KQN Q ++ L +A E E + Q+ N +V+ + E +++ S
Sbjct: 965 KEKVEKQNQEIQELQSKINLLYKAVEEKDSEINNQKIENDNLGKVVDSMRE-NLQSIESE 1023
Query: 513 -IERNNKNLEVRRETVS 560
I+RN +N ++ + +S
Sbjct: 1024 IIQRNEENSLLQSQLIS 1040
>SB_33280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +3
Query: 180 PPALLQQSKRSLDGTHANIREISENRSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFRN 359
P +++ + R D + N + N+ D + + RR NRN N+ N
Sbjct: 87 PTTIMRHNNRRTDNNNRNNNNNNNNKRT-DNNYRNNNNNRRTDNNNRNNNNKNNRRTDNN 145
Query: 360 NRSKQNTRQ 386
NR+ N R+
Sbjct: 146 NRNNNNNRR 154
>SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28)
Length = 562
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +1
Query: 13 SLHQYHIAKENPKTQSIQLLCITGVYYWRLSRY 111
+LH +A+ + K Q ++ G Y W++ Y
Sbjct: 386 ALHDIQLAEHDLKLQMLEATSYDGTYIWKIDEY 418
>SB_4635| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 330 SVGFYSVRYNDGCHVCELSLD 268
SV FY + +DG H+CEL D
Sbjct: 10 SVNFYKEKDSDGKHLCELLTD 30
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,521,845
Number of Sequences: 59808
Number of extensions: 381950
Number of successful extensions: 1323
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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