Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e04f
(611 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical pr... 36 0.017
Z50110-3|CAA90445.2| 459|Caenorhabditis elegans Hypothetical pr... 34 0.070
AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian el... 34 0.070
AC024796-7|AAN60505.2| 414|Caenorhabditis elegans Hypothetical ... 33 0.21
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 31 0.65
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 31 0.65
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 30 1.1
U41535-13|AAB63405.1| 1075|Caenorhabditis elegans Hypothetical p... 30 1.1
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 30 1.1
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 30 1.5
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 4.6
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 4.6
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 4.6
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 27 8.0
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 8.0
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 8.0
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 8.0
AF077540-2|AAC26311.2| 362|Caenorhabditis elegans Hypothetical ... 27 8.0
AF077540-1|ABC71801.1| 422|Caenorhabditis elegans Hypothetical ... 27 8.0
AC024797-2|AAF60705.3| 339|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical
protein T04F8.6 protein.
Length = 766
Score = 36.3 bits (80), Expect = 0.017
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 4/133 (3%)
Frame = +3
Query: 204 KRSLDGTHANIREISENRSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSKQ-NT 380
K L+ +RE E R + HI + RR ++ N+Q +E NNR K+
Sbjct: 258 KSLLENYRCTVREF-EMRCEHMQKQIHIANQRRNMLIEELDQNQQSIEASYNNRLKEMEE 316
Query: 381 RQFSVDSLVRAELRVERHRQRSNGINDRRVLREVTERDVRF---YRSIERNNKNLEVRRE 551
R + + + R+ERH + N + L V + + + +ER+NK + E
Sbjct: 317 RCRGRIAAMEEKFRMERHEMQKEIENIEKDLSLVRQNETSLKNKLQLVERHNKRITTELE 376
Query: 552 TVSKSLQQYETDN 590
+ ++ E +N
Sbjct: 377 DQTDAVNALEQEN 389
>Z50110-3|CAA90445.2| 459|Caenorhabditis elegans Hypothetical
protein F18H3.4 protein.
Length = 459
Score = 34.3 bits (75), Expect = 0.070
Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 10/143 (6%)
Frame = +3
Query: 162 ECCGRQPPALLQQSKRSLDGTHANIREISENRSLKDRATTHIRDIRRYIVQNRNQLNRQL 341
E G PP Q+ + L+G H+ IR+I ++ + + + RNQL L
Sbjct: 15 EKTGTNPPDR-QRFENDLEGFHSEIRKIRSQIQMRCKTCLDANPLENEMRNKRNQLRVDL 73
Query: 342 V------EDFRNNRSKQNTRQFSVDSLVRAELRVERHRQRSNGINDRRVLREVTERD--- 494
+ + N Q T+Q ++ R +R + H R + R R ++ RD
Sbjct: 74 AQLKGDGDKIKVNIDSQRTKQLDLERDCR--IRNKDHLDRLLLEHQERYKRNLSARDEQA 131
Query: 495 -VRFYRSIERNNKNLEVRRETVS 560
V +++RN K LE E S
Sbjct: 132 LVTEIDALKRNKKLLESLAEITS 154
>AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian
elks/cast/erc/rab6 interactingprotein homolog protein 1
protein.
Length = 836
Score = 34.3 bits (75), Expect = 0.070
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Frame = +3
Query: 183 PALLQQSKRSLDGTHANIREISE----NRSLKDRATTHIRDIRRYIVQNRNQLNRQLVED 350
P L +S + + H I E+ E + S+ H+ + ++ Q +QLN E
Sbjct: 635 PGTLTRSTSAQNNMHKRIEELEEALRESVSITAEREVHLSQQKHHLQQVSSQLNEARKEI 694
Query: 351 FRNNRSKQNTRQF-SVDSLVRA-ELRVERHRQRSNGINDRRVLREVTERD 494
R+KQN + D ++RA E +H ++ + +L ++E+D
Sbjct: 695 TELRRTKQNPSETGDRDQIIRAIETERRQHLEQLFQLKQEALLAAISEKD 744
>AC024796-7|AAN60505.2| 414|Caenorhabditis elegans Hypothetical
protein Y48G1C.11 protein.
Length = 414
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +3
Query: 27 PHRKGKPQNTEHTVTMHNWRLLLAFVAILQPILSF 131
P R+GKPQN T M W L L V+ L I +F
Sbjct: 50 PSRRGKPQNKMRTDVMPTWLLFLDCVSQLHRIYTF 84
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 31.1 bits (67), Expect = 0.65
Identities = 25/124 (20%), Positives = 54/124 (43%)
Frame = +3
Query: 240 EISENRSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSKQNTRQFSVDSLVRAEL 419
EISE + + +RD + R++ Q++ + +N +T + + L++
Sbjct: 710 EISEKQQEVENLMAEMRDKEAHWKTKRDEFEAQMLRNQEDNEEASSTLKSVQEQLMKE-- 767
Query: 420 RVERHRQRSNGINDRRVLREVTERDVRFYRSIERNNKNLEVRRETVSKSLQQYETDNVAA 599
+ +++ I+ + L E+ R RS E + +E + V+ + Q E D + A
Sbjct: 768 KETSGEEKNQLISVKSQLEELKTEVERLIRSEEEKTQEIEKLKSAVTATTQ--ERDELTA 825
Query: 600 SRTS 611
+ S
Sbjct: 826 TSES 829
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 31.1 bits (67), Expect = 0.65
Identities = 25/124 (20%), Positives = 54/124 (43%)
Frame = +3
Query: 240 EISENRSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSKQNTRQFSVDSLVRAEL 419
EISE + + +RD + R++ Q++ + +N +T + + L++
Sbjct: 712 EISEKQQEVENLMAEMRDKEAHWKTKRDEFEAQMLRNQEDNEEASSTLKSVQEQLMKE-- 769
Query: 420 RVERHRQRSNGINDRRVLREVTERDVRFYRSIERNNKNLEVRRETVSKSLQQYETDNVAA 599
+ +++ I+ + L E+ R RS E + +E + V+ + Q E D + A
Sbjct: 770 KETSGEEKNQLISVKSQLEELKTEVERLIRSEEEKTQEIEKLKSAVTATTQ--ERDELTA 827
Query: 600 SRTS 611
+ S
Sbjct: 828 TSES 831
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 31.1 bits (67), Expect = 0.65
Identities = 25/124 (20%), Positives = 54/124 (43%)
Frame = +3
Query: 240 EISENRSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSKQNTRQFSVDSLVRAEL 419
EISE + + +RD + R++ Q++ + +N +T + + L++
Sbjct: 712 EISEKQQEVENLMAEMRDKEAHWKTKRDEFEAQMLRNQEDNEEASSTLKSVQEQLMKE-- 769
Query: 420 RVERHRQRSNGINDRRVLREVTERDVRFYRSIERNNKNLEVRRETVSKSLQQYETDNVAA 599
+ +++ I+ + L E+ R RS E + +E + V+ + Q E D + A
Sbjct: 770 KETSGEEKNQLISVKSQLEELKTEVERLIRSEEEKTQEIEKLKSAVTATTQ--ERDELTA 827
Query: 600 SRTS 611
+ S
Sbjct: 828 TSES 831
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical protein
F33A8.1 protein.
Length = 897
Score = 30.3 bits (65), Expect = 1.1
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Frame = +3
Query: 195 QQSKRSLDGTHANIREISENRSLKDR-ATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSK 371
++S + + + R+ + R+ + R + +D R Q+ ++ R D R +RSK
Sbjct: 745 EESSKKKEKENIGRRDRGDKRAERHRDQSVENKDKDRRRRQDSDENRRPERGDDRKDRSK 804
Query: 372 QNTRQFSVDSLVRAELRVERHRQRSNGINDRRVLREVTE--RDVRFYRSIERNNKNLEVR 545
RQ S D + R E +R G DRR + E R+ R RS +R ++ R
Sbjct: 805 DRRRQDSDDEDRKGRERREDSGERRRGDRDRRDRNKDQEDHREDRRDRSKDREDRRDRRR 864
Query: 546 RET 554
++
Sbjct: 865 HDS 867
>U41535-13|AAB63405.1| 1075|Caenorhabditis elegans Hypothetical
protein F18A1.1 protein.
Length = 1075
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 315 NRNQLNRQLVEDFRNNRSKQNTRQFSVDSLVRAELRVERHRQRSNGINDR 464
N N Q +F R +Q T++FS + RA L ++ R+ NG N+R
Sbjct: 21 NENMETFQTENEFELRRKRQITKEFSHNFEKRAILPLKEFRRLPNGRNNR 70
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin protein.
Length = 897
Score = 30.3 bits (65), Expect = 1.1
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Frame = +3
Query: 195 QQSKRSLDGTHANIREISENRSLKDR-ATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSK 371
++S + + + R+ + R+ + R + +D R Q+ ++ R D R +RSK
Sbjct: 745 EESSKKKEKENIGRRDRGDKRAERHRDQSVENKDKDRRRRQDSDENRRPERGDDRKDRSK 804
Query: 372 QNTRQFSVDSLVRAELRVERHRQRSNGINDRRVLREVTE--RDVRFYRSIERNNKNLEVR 545
RQ S D + R E +R G DRR + E R+ R RS +R ++ R
Sbjct: 805 DRRRQDSDDEDRKGRERREDSGERRRGDRDRRDRNKDQEDHREDRRDRSKDREDRRDRRR 864
Query: 546 RET 554
++
Sbjct: 865 HDS 867
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 29.9 bits (64), Expect = 1.5
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Frame = +3
Query: 255 RSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSKQNTRQF-SVDSLVRAELRVE- 428
R +DR RD RR + +R D + +RS+ R+ S D+ R R
Sbjct: 290 RDSRDRDRDRDRDRRRSRDRRSRSRDRDRDRDRKRSRSRDRKRRSRSRDNKDRDRKRSRS 349
Query: 429 RHRQRSNGINDRRVLREVTERDVRFYRSIERNNKNLEVRRETVSKSLQQYETDNVAASR 605
R R+R + DR+ R + R +++ E RR+ + ++ E +N ++ R
Sbjct: 350 RDRRRRSKSRDRKRERSRSRSKDRKRDKKRSRSRSPEKRRDKEDRKTEKKENENESSLR 408
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 29.9 bits (64), Expect = 1.5
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Frame = +3
Query: 255 RSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSKQNTRQF-SVDSLVRAELRVE- 428
R +DR RD RR + +R D + +RS+ R+ S D+ R R
Sbjct: 290 RDSRDRDRDRDRDRRRSRDRRSRSRDRDRDRDRKRSRSRDRKRRSRSRDNKDRDRKRSRS 349
Query: 429 RHRQRSNGINDRRVLREVTERDVRFYRSIERNNKNLEVRRETVSKSLQQYETDNVAASR 605
R R+R + DR+ R + R +++ E RR+ + ++ E +N ++ R
Sbjct: 350 RDRRRRSKSRDRKRERSRSRSKDRKRDKKRSRSRSPEKRRDKEDRKTEKKENENESSLR 408
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 4.6
Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 12/139 (8%)
Frame = +3
Query: 192 LQQSKRSLDGTHANIREISENRSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSK 371
L++++ IR + + +D A + +++ + ++NR+L+ED ++ K
Sbjct: 970 LRKAESEKQSKDHQIRSLQDEMQQQDEAIAKLNKEKKH----QEEINRKLMEDLQSEEDK 1025
Query: 372 QN-----------TRQFSVDSLVRAE-LRVERHRQRSNGINDRRVLREVTERDVRFYRSI 515
N T DSL R + R + +Q+ + ++ +E + R +
Sbjct: 1026 GNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELKIAQENIDESGRQRHDL 1085
Query: 516 ERNNKNLEVRRETVSKSLQ 572
E N K E +VS L+
Sbjct: 1086 ENNLKKKESELHSVSSRLE 1104
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 4.6
Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 12/139 (8%)
Frame = +3
Query: 192 LQQSKRSLDGTHANIREISENRSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSK 371
L++++ IR + + +D A + +++ + ++NR+L+ED ++ K
Sbjct: 970 LRKAESEKQSKDHQIRSLQDEMQQQDEAIAKLNKEKKH----QEEINRKLMEDLQSEEDK 1025
Query: 372 QN-----------TRQFSVDSLVRAE-LRVERHRQRSNGINDRRVLREVTERDVRFYRSI 515
N T DSL R + R + +Q+ + ++ +E + R +
Sbjct: 1026 GNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELKIAQENIDESGRQRHDL 1085
Query: 516 ERNNKNLEVRRETVSKSLQ 572
E N K E +VS L+
Sbjct: 1086 ENNLKKKESELHSVSSRLE 1104
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 28.3 bits (60), Expect = 4.6
Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 12/139 (8%)
Frame = +3
Query: 192 LQQSKRSLDGTHANIREISENRSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSK 371
L++++ IR + + +D A + +++ + ++NR+L+ED ++ K
Sbjct: 973 LRKAESEKQSKDHQIRSLQDEMQQQDEAIAKLNKEKKH----QEEINRKLMEDLQSEEDK 1028
Query: 372 QN-----------TRQFSVDSLVRAE-LRVERHRQRSNGINDRRVLREVTERDVRFYRSI 515
N T DSL R + R + +Q+ + ++ +E + R +
Sbjct: 1029 GNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELKIAQENIDESGRQRHDL 1088
Query: 516 ERNNKNLEVRRETVSKSLQ 572
E N K E +VS L+
Sbjct: 1089 ENNLKKKESELHSVSSRLE 1107
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 27.5 bits (58), Expect = 8.0
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +3
Query: 228 ANIREISENRSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFRNNRSKQNTRQFSVDSLV 407
A IR +SEN T +RD+ YI+ NR + + +F S + S D +
Sbjct: 150 AGIRYLSENLKF---VNTVVRDVNNYIMSNRCECEPSIDIEFVQKLSSSSRNPIS-DEKI 205
Query: 408 RAELR 422
+R
Sbjct: 206 NTNMR 210
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.5 bits (58), Expect = 8.0
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Frame = +3
Query: 255 RSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFR-NNRSKQNTRQFSVDSLVRAELRVER 431
R L+D H I+ ++LNR++ R NNR K ++
Sbjct: 643 RKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLK-----------DK 691
Query: 432 HRQRSNGINDRRVLREVTERDVRFYRSIERN-NKNLEVRRE 551
+R N N + E E +R+ I RN K+L+ RE
Sbjct: 692 YRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLRE 732
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.5 bits (58), Expect = 8.0
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Frame = +3
Query: 255 RSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFR-NNRSKQNTRQFSVDSLVRAELRVER 431
R L+D H I+ ++LNR++ R NNR K ++
Sbjct: 716 RKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLK-----------DK 764
Query: 432 HRQRSNGINDRRVLREVTERDVRFYRSIERN-NKNLEVRRE 551
+R N N + E E +R+ I RN K+L+ RE
Sbjct: 765 YRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLRE 805
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.5 bits (58), Expect = 8.0
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Frame = +3
Query: 255 RSLKDRATTHIRDIRRYIVQNRNQLNRQLVEDFR-NNRSKQNTRQFSVDSLVRAELRVER 431
R L+D H I+ ++LNR++ R NNR K ++
Sbjct: 716 RKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLK-----------DK 764
Query: 432 HRQRSNGINDRRVLREVTERDVRFYRSIERN-NKNLEVRRE 551
+R N N + E E +R+ I RN K+L+ RE
Sbjct: 765 YRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLRE 805
>AF077540-2|AAC26311.2| 362|Caenorhabditis elegans Hypothetical
protein T07H3.3a protein.
Length = 362
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 392 RKLASILFASIVSEVFNKLSIQLVSILYDITTDVTY 285
RKL + L ++VSE N+ +++L +D+ + TY
Sbjct: 191 RKLRADLILALVSENGNRFAVKLKDACFDLISSETY 226
>AF077540-1|ABC71801.1| 422|Caenorhabditis elegans Hypothetical
protein T07H3.3b protein.
Length = 422
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 392 RKLASILFASIVSEVFNKLSIQLVSILYDITTDVTY 285
RKL + L ++VSE N+ +++L +D+ + TY
Sbjct: 191 RKLRADLILALVSENGNRFAVKLKDACFDLISSETY 226
>AC024797-2|AAF60705.3| 339|Caenorhabditis elegans Hypothetical
protein Y48G8AR.2 protein.
Length = 339
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 453 INDRRVLREVTERDVRFYRSIERNNKNLEVRRETVSKSLQQ-YETDNVAASRTS 611
I ++R +R V E+D+ F +S + ++L SLQ+ +VA S +S
Sbjct: 18 IEEQRAIRSVLEKDLEFQQSEQNRIRSLSTCVAIKKTSLQEKRRASSVAGSESS 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,723,529
Number of Sequences: 27780
Number of extensions: 276580
Number of successful extensions: 934
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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