Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10e03f
         (572 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   5.3  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   9.3  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   9.3  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -3

Query: 147  LCPRGLC*KQKQN*RTETGRRLALVVSHPRIL-FFLDNKLRFTENCQSQ 4
            LC  GL    KQN  + TG+R+AL+    +++ F + +K  F  +  ++
Sbjct: 1494 LCNNGLL---KQNLYSPTGKRVALLSEDGQVVDFAMHSKTAFVASVNAR 1539


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 363 KGQYMNFFHGMDLLSDSKTQP 301
           +GQ  N  HGM +  +  T P
Sbjct: 387 RGQIWNTHHGMGMFGNQTTSP 407


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 12/41 (29%), Positives = 15/41 (36%)
 Frame = +2

Query: 116  FCFQHRPLGHSRNGYDGINVTAAAGCN*AAPQRSSNKENPG 238
            F +QH    H  NG          G      +  S+K NPG
Sbjct: 1396 FSYQHPHPHHHHNGSGRSKPPGPEGVGGGGGKSPSDKHNPG 1436


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,003
Number of Sequences: 2352
Number of extensions: 7569
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)