Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10e01r
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   3.5  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   3.5  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    23   3.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.1  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   8.1  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   8.1  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 70  IVLNFRITWTHYYLTTIF 123
           IVL F + WT YY+  I+
Sbjct: 280 IVLVFFVCWTPYYVMCIW 297


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 70  IVLNFRITWTHYYLTTIF 123
           IVL F + WT YY+  I+
Sbjct: 280 IVLVFFVCWTPYYVMCIW 297


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -1

Query: 268 ERLFLLWCRNSQLQSQYNMCPYRRTHRLLSARDHDACNSA 149
           +R F+    N Q    YN+  + RTH        D C  A
Sbjct: 77  KRQFICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGKA 116


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 70  FIVCIWYGYC 41
           F++CI+Y YC
Sbjct: 142 FLLCIYYFYC 151



 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 70  FIVCIWYGYC 41
           F++CI+Y YC
Sbjct: 281 FLLCIYYFYC 290


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 208 PYRRTHRLLSARDHD 164
           PY+RTH  +  R H+
Sbjct: 106 PYQRTHENMLLRHHE 120


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +3

Query: 459 RSQEYHLMPDAQIFFGVLKNILVGTIVL 542
           R +  +L P   +   +L+NI+VGT+++
Sbjct: 722 RKRRQYLCP-VLLRVSILRNIIVGTLMM 748


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 208 PYRRTHRLLSARDHD 164
           PY+RTH  +  R H+
Sbjct: 106 PYQRTHENMLLRHHE 120


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 208 PYRRTHRLLSARDHD 164
           PY+RTH  +  R H+
Sbjct: 106 PYQRTHENMLLRHHE 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,312
Number of Sequences: 336
Number of extensions: 4039
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)