Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e01f
(611 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC107887-1|AAI07888.1| 237|Homo sapiens REXO2 protein protein. 103 7e-22
BC105026-1|AAI05027.1| 237|Homo sapiens REX2, RNA exonuclease 2... 103 7e-22
BC105024-1|AAI05025.1| 237|Homo sapiens small fragment nuclease... 103 7e-22
AK223200-1|BAD96920.1| 237|Homo sapiens small fragment nuclease... 103 7e-22
AF151872-1|AAD34109.1| 205|Homo sapiens CGI-114 protein protein. 103 7e-22
CR533500-1|CAG38531.1| 237|Homo sapiens DKFZP566E144 protein. 102 9e-22
BC003502-1|AAH03502.1| 79|Homo sapiens REXO2 protein protein. 66 9e-11
X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor de... 29 9.8
BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor, n... 29 9.8
BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor, n... 29 9.8
AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein. 29 9.8
>BC107887-1|AAI07888.1| 237|Homo sapiens REXO2 protein protein.
Length = 237
Score = 103 bits (246), Expect = 7e-22
Identities = 41/71 (57%), Positives = 60/71 (84%)
Frame = +2
Query: 392 IAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCK 571
+AQR+VW+DLEMTGLDIE D I+E+ACL+TD+ LN++A GP+++I P+ L+ M++WCK
Sbjct: 39 MAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCK 98
Query: 572 VQHGETGLTEA 604
HG++GLT+A
Sbjct: 99 EHHGKSGLTKA 109
>BC105026-1|AAI05027.1| 237|Homo sapiens REX2, RNA exonuclease 2
homolog (S. cerevisiae) protein.
Length = 237
Score = 103 bits (246), Expect = 7e-22
Identities = 41/71 (57%), Positives = 60/71 (84%)
Frame = +2
Query: 392 IAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCK 571
+AQR+VW+DLEMTGLDIE D I+E+ACL+TD+ LN++A GP+++I P+ L+ M++WCK
Sbjct: 39 MAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCK 98
Query: 572 VQHGETGLTEA 604
HG++GLT+A
Sbjct: 99 EHHGKSGLTKA 109
>BC105024-1|AAI05025.1| 237|Homo sapiens small fragment nuclease
protein.
Length = 237
Score = 103 bits (246), Expect = 7e-22
Identities = 41/71 (57%), Positives = 60/71 (84%)
Frame = +2
Query: 392 IAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCK 571
+AQR+VW+DLEMTGLDIE D I+E+ACL+TD+ LN++A GP+++I P+ L+ M++WCK
Sbjct: 39 MAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCK 98
Query: 572 VQHGETGLTEA 604
HG++GLT+A
Sbjct: 99 EHHGKSGLTKA 109
>AK223200-1|BAD96920.1| 237|Homo sapiens small fragment nuclease
variant protein.
Length = 237
Score = 103 bits (246), Expect = 7e-22
Identities = 41/71 (57%), Positives = 60/71 (84%)
Frame = +2
Query: 392 IAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCK 571
+AQR+VW+DLEMTGLDIE D I+E+ACL+TD+ LN++A GP+++I P+ L+ M++WCK
Sbjct: 39 MAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCK 98
Query: 572 VQHGETGLTEA 604
HG++GLT+A
Sbjct: 99 EHHGKSGLTKA 109
>AF151872-1|AAD34109.1| 205|Homo sapiens CGI-114 protein protein.
Length = 205
Score = 103 bits (246), Expect = 7e-22
Identities = 41/71 (57%), Positives = 60/71 (84%)
Frame = +2
Query: 392 IAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCK 571
+AQR+VW+DLEMTGLDIE D I+E+ACL+TD+ LN++A GP+++I P+ L+ M++WCK
Sbjct: 7 MAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCK 66
Query: 572 VQHGETGLTEA 604
HG++GLT+A
Sbjct: 67 EHHGKSGLTKA 77
>CR533500-1|CAG38531.1| 237|Homo sapiens DKFZP566E144 protein.
Length = 237
Score = 102 bits (245), Expect = 9e-22
Identities = 41/71 (57%), Positives = 59/71 (83%)
Frame = +2
Query: 392 IAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCK 571
+AQR+VW+DLEMTGLDIE D I+E+ACL+TD+ LN++A GP+++I P+ L+ M++WCK
Sbjct: 39 MAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCK 98
Query: 572 VQHGETGLTEA 604
HG +GLT+A
Sbjct: 99 EHHGRSGLTKA 109
>BC003502-1|AAH03502.1| 79|Homo sapiens REXO2 protein protein.
Length = 79
Score = 66.1 bits (154), Expect = 9e-11
Identities = 27/40 (67%), Positives = 36/40 (90%)
Frame = +2
Query: 392 IAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATG 511
+AQR+VW+DLEMTGLDIE D I+E+ACL+TD+ LN++A G
Sbjct: 39 MAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEG 78
>X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor delta
subunit protein.
Length = 517
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 138 ISIDNIGVNIFQK*YVCNVMLYNY*FHFFLCNDMQLRSTCKVYFT 272
I ++N FQ Y CNV++Y+Y F ++L + RS+C + T
Sbjct: 113 IVLENNNDGSFQISYSCNVLVYHYGFVYWLPPAI-FRSSCPISVT 156
>BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 138 ISIDNIGVNIFQK*YVCNVMLYNY*FHFFLCNDMQLRSTCKVYFT 272
I ++N FQ Y CNV++Y+Y F ++L + RS+C + T
Sbjct: 113 IVLENNNDGSFQISYSCNVLVYHYGFVYWLPPAI-FRSSCPISVT 156
>BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 138 ISIDNIGVNIFQK*YVCNVMLYNY*FHFFLCNDMQLRSTCKVYFT 272
I ++N FQ Y CNV++Y+Y F ++L + RS+C + T
Sbjct: 113 IVLENNNDGSFQISYSCNVLVYHYGFVYWLPPAI-FRSSCPISVT 156
>AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein.
Length = 517
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 138 ISIDNIGVNIFQK*YVCNVMLYNY*FHFFLCNDMQLRSTCKVYFT 272
I ++N FQ Y CNV++Y+Y F ++L + RS+C + T
Sbjct: 113 IVLENNNDGSFQISYSCNVLVYHYGFVYWLPPAI-FRSSCPISVT 156
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,468,981
Number of Sequences: 237096
Number of extensions: 1774472
Number of successful extensions: 6605
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6605
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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