Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10e01f
         (611 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72502-5|CAA96590.1|  193|Caenorhabditis elegans Hypothetical pr...    83   1e-16
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U55364-11|AAA97976.1|  196|Caenorhabditis elegans Hypothetical p...    29   2.6  
Z99286-2|CAH60793.1|  310|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U51997-2|AAG24069.1|  332|Caenorhabditis elegans Serpentine rece...    27   8.0  
AF068718-5|AAC17768.1|  320|Caenorhabditis elegans Hypothetical ...    27   8.0  
AF016446-5|AAC24163.1|  329|Caenorhabditis elegans Serpentine re...    27   8.0  

>Z72502-5|CAA96590.1|  193|Caenorhabditis elegans Hypothetical
           protein C08B6.8 protein.
          Length = 193

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 37/70 (52%), Positives = 49/70 (70%)
 Frame = +2

Query: 392 IAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCK 571
           I QRI+W+D EMTGLD+E   + EIA +VTD++LN +ATGPDIVI+ P+  L+ M  W +
Sbjct: 11  IEQRIIWIDCEMTGLDVEKQTLCEIALIVTDSELNTIATGPDIVIHQPKEVLDNMEEWPR 70

Query: 572 VQHGETGLTE 601
               E GL E
Sbjct: 71  NTFHENGLME 80


>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
            C27F2.8 protein.
          Length = 1715

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 169  FRNSMYVM*CCTTINFIFFCVMTCSYVQHVKSIS 270
            F N MY   C T + F   CV+ C+Y++  ++I+
Sbjct: 1051 FENIMYYS-CVTALIFCLVCVLACAYLEGDRAIA 1083


>U55364-11|AAA97976.1|  196|Caenorhabditis elegans Hypothetical
           protein F21C10.4 protein.
          Length = 196

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 433 SCHFKIHPYNPLSYVNFSIFFHHYFRRH 350
           S H  I P  P+ Y N   ++H Y+R H
Sbjct: 94  STHVIIQPATPIIYDNHHYYWHGYYRSH 121


>Z99286-2|CAH60793.1|  310|Caenorhabditis elegans Hypothetical
           protein Y7A9C.8 protein.
          Length = 310

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 463 FHYVVIFNVKSCHFKIHPYNPLSYVNFSIFFH 368
           F  + +F+ +  + ++ PY P  Y  F +FFH
Sbjct: 161 FIILCVFSSRVKYERVDPYKPPCYYGFILFFH 192


>U51997-2|AAG24069.1|  332|Caenorhabditis elegans Serpentine
           receptor, class h protein19 protein.
          Length = 332

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = -3

Query: 525 ITISGPVATTFSCASVTRHAISIMWSFS---MSSPVISRSIHTIL*AMSTLVFFFIIIFG 355
           +T S P+   +   S+ R    + W      +   VI  ++H IL  +   +F + ++FG
Sbjct: 208 LTFSLPITALYINISIPRSTSHVNWKIQKQLLKRLVIQFAVHEILMGIPHCMFIYAVLFG 267


>AF068718-5|AAC17768.1|  320|Caenorhabditis elegans Hypothetical
           protein R01B10.4 protein.
          Length = 320

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
 Frame = +1

Query: 97  YTKQFNKLGRDYYRLV*IILV*IYFRNSM---------YVM*CCTTINFIFFCVMTCSYV 249
           +TKQ   LGR   + + I+   +Y  + M         Y M CC     +F  + TC YV
Sbjct: 180 FTKQLQFLGRGGPKYIQILFALVYLNHFMKMMQNFDYGYNMTCC----IVFSLITTCLYV 235

Query: 250 QHV 258
            H+
Sbjct: 236 HHL 238


>AF016446-5|AAC24163.1|  329|Caenorhabditis elegans Serpentine
           receptor, class h protein22 protein.
          Length = 329

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 25/115 (21%), Positives = 47/115 (40%), Gaps = 5/115 (4%)
 Frame = -3

Query: 519 ISGPVATTFSCASVTRHAISIMWSFS---MSSPVISRSIHTIL*AMSTLVFFFIIIFGDM 349
           +S P    F   S+++ A    W      + S VI  SIH+I+  +   +F +   FG  
Sbjct: 210 LSIPGTAIFINLSISKSASESTWKIQKNLLKSLVIQASIHSIMMGVPNGMFNYAFFFGYE 269

Query: 348 DKLRVKNVIALRDNVDFIMLYVIVLM*N--RLYMLNVTACHYTKKNEINSCTTLH 190
           ++        +     F+  + +++     R Y+L       T   ++ S T+LH
Sbjct: 270 NESLAYGAFVILTYHGFVSTFALIIFTKPLREYLLIAFKMKKTATQKV-SMTSLH 323


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,009,261
Number of Sequences: 27780
Number of extensions: 302354
Number of successful extensions: 786
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)