Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d24r
(702 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 219 4e-58
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 189 3e-49
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 168 6e-43
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 158 8e-40
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 133 3e-32
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 113 2e-26
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 98 1e-21
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 78 1e-15
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 51 2e-07
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 28 1.5
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 2.6
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 3.4
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 27 3.4
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.4
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 4.5
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 6.0
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 6.0
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 25 7.9
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 219 bits (534), Expect = 4e-58
Identities = 99/133 (74%), Positives = 108/133 (81%)
Frame = -3
Query: 700 TCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLK 521
T NFRALCTGEKG+GY GS FHRVIP FMLQGGDFT NGTGGKSIYG KF DENF LK
Sbjct: 30 TAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALK 89
Query: 520 HTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGK 341
H PG+LSMANAG +TNGSQFFITTV T WLDG+HVVFG V EGM+VVK++E+ GS SG
Sbjct: 90 HNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGA 149
Query: 340 TSKRIVIKDCGQI 302
T RIVI CG +
Sbjct: 150 TRARIVIDKCGTV 162
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 189 bits (461), Expect = 3e-49
Identities = 84/111 (75%), Positives = 95/111 (85%)
Frame = -3
Query: 700 TCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLK 521
T ENFRAL TGEKGFGY+GSIFHRVIPNFM+QGGD T +GTGGKSIYG++F DENF L
Sbjct: 55 TAENFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLS 114
Query: 520 HTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 368
H PG+LSMANAG D+NGSQFFITTVKT WLDG HVVFG V+ G ++VK+I
Sbjct: 115 HQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 168 bits (409), Expect = 6e-43
Identities = 82/135 (60%), Positives = 98/135 (72%), Gaps = 4/135 (2%)
Frame = -3
Query: 700 TCENFRALCTGEKGFG----YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 533
T +NF +LC G + G YKGS FHRVI NFMLQGGDFT NGTGG+SIYG KFEDEN
Sbjct: 31 TVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDEN 90
Query: 532 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 353
F LKH P +LSMANAG +TNGSQFFITTV T LDG+HVVFG V++G V+ IE +
Sbjct: 91 FELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLET 150
Query: 352 QSGKTSKRIVIKDCG 308
++ +VI++CG
Sbjct: 151 KNDDPVVPVVIEECG 165
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 158 bits (383), Expect = 8e-40
Identities = 76/141 (53%), Positives = 98/141 (69%), Gaps = 8/141 (5%)
Frame = -3
Query: 700 TCENFRALCTGE------KGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNK-FE 542
T ENFR CTGE K GYK S FHR+I FM+QGGDF + +GTG +I+ ++ F
Sbjct: 33 TAENFRQFCTGETLGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFP 92
Query: 541 DENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE- 365
DENFTLKH PG+LSMANAG D+NG QFFITTV +LDG+HVVFG V+EG ++VK+IE
Sbjct: 93 DENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIES 152
Query: 364 TFGSQSGKTSKRIVIKDCGQI 302
T + + + I +CG++
Sbjct: 153 TPVGANSRPKSNVAIVECGEM 173
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 133 bits (321), Expect = 3e-32
Identities = 65/112 (58%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Frame = -3
Query: 700 TCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTL 524
TC+NF L ++G+ Y G IFHRVIP+F++QGGD T G GG SIYG+KF+DE + L
Sbjct: 25 TCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGTSIYGDKFDDEIHSDL 80
Query: 523 KHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 368
HTG G+LSMANAG +TN SQFFIT T WLDG+H +FG VV G+ V K++
Sbjct: 81 HHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRM 132
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 113 bits (272), Expect = 2e-26
Identities = 56/102 (54%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Frame = -3
Query: 667 EKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMA 491
E G+ Y +IFHR+I NFM+QGGD +GTGG+SI+ FEDE + LKH P +SMA
Sbjct: 487 ENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGESIWKKDFEDEISPNLKHDRPFTVSMA 544
Query: 490 NAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 365
N+G +TNGSQFFITT T WLDG+H +F G++VV +IE
Sbjct: 545 NSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIE 586
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 97.9 bits (233), Expect = 1e-21
Identities = 50/108 (46%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Frame = -3
Query: 652 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGAD 476
Y+ +IFHR I FM+QGGD + G GG+SI+G F+DE LKH G++SMAN G +
Sbjct: 312 YRNTIFHRNIARFMIQGGD-PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKN 370
Query: 475 TNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 332
TNGSQFFI LD +H +FG VV G+ V+ +E + S K
Sbjct: 371 TNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPK 418
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 77.8 bits (183), Expect = 1e-15
Identities = 45/102 (44%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Frame = -3
Query: 697 CENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENF-TLK 521
C NF LC +G+ Y G+I HRV+P F++QGGD T G GG+SIYG F E L+
Sbjct: 37 CRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGESIYGEPFAVETHPRLR 92
Query: 520 HTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 395
G++ MA + N SQFFIT T +G+ +FG VV
Sbjct: 93 FIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 50.8 bits (116), Expect = 2e-07
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Frame = -3
Query: 700 TCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIY-----GNKFEDE 536
TCENF LC K Y F+ + N+ Q GD G GG+ ++ G +F
Sbjct: 24 TCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGDGGRCVWNVLNKGTRFFKA 80
Query: 535 NF--TLKHTGPGVLSMANAGADTN-------GSQFFIT-TVKTSWLDGRHVVFGNVVEGM 386
F +L H G++SM+ A + GSQF IT + LD R+ ++G V EG
Sbjct: 81 EFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNLEGLDERYPIYGQVAEGF 140
Query: 385 EVVKQI-ETFGSQSGKTSKRIVIK 317
+ + +I + + G+ + I IK
Sbjct: 141 DTLLKINDAICDEEGQPYRDIRIK 164
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = -1
Query: 651 TRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLSTLDLASS 499
+RA S++S I KE +P+ITA SP +A S + ISP + + +S
Sbjct: 321 SRAAASLLS--ILDSKEKNTPSITAKAGSPQSAPSKASYISPYARPGITTS 369
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 342 FPDWLPKVSICLTTSMPSTTFPKTTCLPS 428
FP WL K S CL +P T+ P T + S
Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPSTPSIRS 329
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2
Query: 470 WFPVLHHHC 444
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +2
Query: 308 TTVFDNDSLRGLPRLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEELG 466
T VFD + +L+ ++++DN +IPK+ A S + +G
Sbjct: 525 TVVFDKTGTLTVGKLSVTDISIVDNLEELLDIPKNIFWAFVKASESSSEHPIG 577
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -1
Query: 690 TSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLST 517
TS C + S+ S +S+PI+ TS + T++ P++ S T SPL T
Sbjct: 225 TSTSCTTS--TSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -1
Query: 690 TSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLST 517
TS C + T S+ S+PI+ TS + T++ P++ S T SPL T
Sbjct: 168 TSTSCTTSTSIPPTGGSSSL-STPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 375 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 524
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -3
Query: 598 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 452
D + T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 6.0
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 357 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 536
P S + +S +++ T+ P+S EV T P+ S+ A + E + G V
Sbjct: 162 PASSTEVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVASSSEISAGSATSYVPT 221
Query: 537 SSSNL 551
SSS++
Sbjct: 222 SSSSI 226
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 7.9
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = +2
Query: 386 HAFNNIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLKG------EILVFK 547
H N P + P +S EL + IS+G+DA S VLK E++V +
Sbjct: 228 HELNESPSTPTAPDFPH-YNSSPSELSPTQRRSSISNGKDAPSPVLKDLTSYTQEVIVCR 286
Query: 548 LIAVDGLSPS 577
LSPS
Sbjct: 287 KFLHHSLSPS 296
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,954,663
Number of Sequences: 5004
Number of extensions: 64560
Number of successful extensions: 197
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 325165428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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