Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d24f
(568 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 260 3e-70
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 259 8e-70
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 250 5e-67
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 247 5e-66
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 242 1e-64
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 234 3e-62
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 232 1e-61
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 231 2e-61
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 221 3e-58
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 220 5e-58
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 208 2e-54
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 208 2e-54
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 196 6e-51
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 188 2e-48
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 186 1e-47
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 159 1e-39
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 144 5e-35
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 136 7e-33
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 134 5e-32
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 123 7e-29
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 122 1e-28
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 103 8e-23
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 95 3e-20
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 60 1e-09
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 50 8e-07
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 49 2e-06
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 47 8e-06
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 47 8e-06
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 47 8e-06
At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid t... 31 0.41
At3g09000.1 68416.m01053 proline-rich family protein 30 0.94
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 28 3.8
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 28 3.8
At5g07270.1 68418.m00829 ankyrin repeat family protein contains ... 28 5.0
At3g20020.1 68416.m02533 protein arginine N-methyltransferase fa... 28 5.0
At1g72540.1 68414.m08388 protein kinase, putative similar to aux... 28 5.0
At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) simi... 27 6.6
At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C... 27 6.6
At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C... 27 6.6
At2g16030.1 68415.m01838 expressed protein 27 6.6
At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar ... 27 6.6
At1g03590.1 68414.m00339 protein phosphatase 2C family protein /... 27 6.6
At5g61030.1 68418.m07659 RNA-binding protein, putative similar t... 27 8.7
At5g15870.1 68418.m01857 glycosyl hydrolase family 81 protein si... 27 8.7
At4g10840.2 68417.m01764 kinesin light chain-related low similar... 27 8.7
At4g10840.1 68417.m01765 kinesin light chain-related low similar... 27 8.7
At3g08840.2 68416.m01026 D-alanine--D-alanine ligase family simi... 27 8.7
At3g04140.1 68416.m00438 ankyrin repeat family protein contains ... 27 8.7
At2g33420.1 68415.m04096 expressed protein 27 8.7
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 260 bits (638), Expect = 3e-70
Identities = 123/171 (71%), Positives = 139/171 (81%), Gaps = 7/171 (4%)
Frame = +2
Query: 56 SLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFH 214
S P+VFFD+T+ AP GKIV+EL +D TPKT ENFRALCTGEKG G +KGS FH
Sbjct: 3 SHPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFH 62
Query: 215 RVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFI 394
RVIPNFM QGGDFT NGTGG+SIYG KFEDENF KHTGPG+LSMANAGA+TNGSQFFI
Sbjct: 63 RVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFI 122
Query: 395 TTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 547
TVKT WLDG+HVVFG VVEG++VVK IE GS SGK +K +VI DCG+I+
Sbjct: 123 CTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 259 bits (635), Expect = 8e-70
Identities = 119/172 (69%), Positives = 141/172 (81%), Gaps = 7/172 (4%)
Frame = +2
Query: 53 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 211
M+ P+V+FD+T+D P G+IV+EL +D TP+T ENFRALCTGEKG G +KGS F
Sbjct: 1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60
Query: 212 HRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFF 391
HRVIPNFM QGGDFT NGTGG+SIYG+KFEDENF KHTGPG+LSMANAGA+TNGSQFF
Sbjct: 61 HRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFF 120
Query: 392 ITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 547
I TVKT WLDG+HVVFG VVEG++VVK IE GS SGK +K +V+ DCGQ++
Sbjct: 121 ICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 250 bits (612), Expect = 5e-67
Identities = 117/169 (69%), Positives = 136/169 (80%), Gaps = 7/169 (4%)
Frame = +2
Query: 62 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 220
P+V+FD+TV G+IV+EL +D TP+T ENFRALCTGE+G G YKGS FHRV
Sbjct: 5 PKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRV 64
Query: 221 IPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITT 400
IP FM QGGDFT NGTGG+SIYG+KF+DENF KHTGPG+LSMANAGA+TNGSQFFI T
Sbjct: 65 IPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICT 124
Query: 401 VKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 547
KTSWLDG+HVVFG VVEG+ VV+ IE GS SG+TSK +VI DCGQI+
Sbjct: 125 EKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 247 bits (604), Expect = 5e-66
Identities = 116/172 (67%), Positives = 136/172 (79%), Gaps = 7/172 (4%)
Frame = +2
Query: 53 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 211
MS PRVFFD+++ P+G+I +EL +D TP T ENFRALCTGEKG G +KGSIF
Sbjct: 1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60
Query: 212 HRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFF 391
HRVIP FM QGGDFT NGTGG+SIYG KF+DENF KHTG G+LSMAN+G +TNGSQFF
Sbjct: 61 HRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFF 120
Query: 392 ITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 547
I T KTSWLDG+HVVFG VV+G++VVK IE GS SGKTSK + I DCGQ++
Sbjct: 121 ICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 242 bits (592), Expect = 1e-64
Identities = 110/171 (64%), Positives = 133/171 (77%), Gaps = 7/171 (4%)
Frame = +2
Query: 53 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 211
M+ P+VFFD+ + G++V+EL +DVTP+T NFRALCTGE G G YKGS F
Sbjct: 1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60
Query: 212 HRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFF 391
HR+IP FM QGGDFT NGTGG+SIYG+KFEDENF LKHTGPG+LSMAN+G +TNGSQFF
Sbjct: 61 HRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFF 120
Query: 392 ITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 544
I T KTSWLDG+HVVFG VV+G VVK +E GS G S+R+VI+DCG++
Sbjct: 121 ICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 234 bits (573), Expect = 3e-62
Identities = 110/167 (65%), Positives = 128/167 (76%), Gaps = 7/167 (4%)
Frame = +2
Query: 65 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 223
+V+FDV +D G++VI L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRII 92
Query: 224 PNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTV 403
P+FM+QGGDFT+ NG GG+SIYG KF DENF LKHTGPGVLSMAN+G DTNGSQFFITTV
Sbjct: 93 PSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTV 152
Query: 404 KTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 544
TSWLDGRHVVFG VV+GM+VV +IE G QSG ++VI D G++
Sbjct: 153 TTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 199
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 232 bits (568), Expect = 1e-61
Identities = 110/167 (65%), Positives = 127/167 (76%), Gaps = 7/167 (4%)
Frame = +2
Query: 65 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 223
+V+FDV +D G+IV+ L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRII 95
Query: 224 PNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTV 403
P+FMLQGGDFT+ NG GG+SIYG KF DENF LKHTGPG LSMANAG DTNGSQFFITTV
Sbjct: 96 PSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTV 155
Query: 404 KTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 544
TSWLDGRHVVFG VV GM+VV ++E G+QSG ++VI D G++
Sbjct: 156 TTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSGTPKSKVVIVDSGEL 202
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 231 bits (566), Expect = 2e-61
Identities = 111/165 (67%), Positives = 130/165 (78%), Gaps = 5/165 (3%)
Frame = +2
Query: 65 RVFFDVTVDDAPLGK----IVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNF 232
+V+FD++V + P+GK IVI L D P+T ENFRALCTGEKGFGYKGS FHRVI +F
Sbjct: 91 KVYFDISVGN-PVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDF 149
Query: 233 MLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTS 412
M+QGGDF NGTGGKS+YG F+DENF L H GPGVLSMANAG +TNGSQFFI T+KTS
Sbjct: 150 MIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTS 209
Query: 413 WLDGRHVVFGNVVEGMEVVKQIETFGSQSG-KTSKRIVIKDCGQI 544
WLDGRHVVFG V+EGMEVVK IE + G + K++VI DCGQ+
Sbjct: 210 WLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQL 254
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 221 bits (540), Expect = 3e-58
Identities = 102/161 (63%), Positives = 127/161 (78%), Gaps = 1/161 (0%)
Frame = +2
Query: 65 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 244
+V+FDV + G+IV+ L +V PKT ENFRALCTGEK +GYKGS FHR+I +FM+QG
Sbjct: 96 KVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQG 155
Query: 245 GDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDG 424
GDFT NGTGG SIYG KFEDENFTLKHTGPG+LSMANAG +TNGSQFFI TVKTSWLD
Sbjct: 156 GDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDN 215
Query: 425 RHVVFGNVVEGMEVVKQIETFGSQSGKTSKR-IVIKDCGQI 544
+HVVFG V+EGM++V+ +E+ +++ K+ I CG++
Sbjct: 216 KHVVFGQVIEGMKLVRTLESQETRAFDVPKKGCRIYACGEL 256
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 220 bits (538), Expect = 5e-58
Identities = 100/168 (59%), Positives = 127/168 (75%), Gaps = 7/168 (4%)
Frame = +2
Query: 65 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 223
+V+FD+ ++ +P G+I+I L ++ PKT ENFR+LCTGEKG G +KGS FHR+I
Sbjct: 60 KVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRII 119
Query: 224 PNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTV 403
P FM+QGGDFT +G GG+SIYG+KF DENF LKHTGPG LSMAN+G D+NGSQFFITTV
Sbjct: 120 PGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGPDSNGSQFFITTV 179
Query: 404 KTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 547
TSWLDG HVVFG V+ GMEVV++IE G SG ++I G+++
Sbjct: 180 TTSWLDGHHVVFGKVLSGMEVVRKIEAQGQDSGVPKANVIIFASGEVS 227
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 208 bits (508), Expect = 2e-54
Identities = 102/172 (59%), Positives = 120/172 (69%), Gaps = 8/172 (4%)
Frame = +2
Query: 50 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 205
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 206 IFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQ 385
FHRVI FM QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G +TNGSQ
Sbjct: 63 SFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQ 122
Query: 386 FFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQ 541
FFI + LDG+HVVFG VVEGM V+K++E G+ GK + + I DCG+
Sbjct: 123 FFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKPTSPVKIIDCGE 174
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 208 bits (508), Expect = 2e-54
Identities = 102/172 (59%), Positives = 120/172 (69%), Gaps = 8/172 (4%)
Frame = +2
Query: 50 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 205
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 206 IFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQ 385
FHRVI FM QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G +TNGSQ
Sbjct: 63 SFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQ 122
Query: 386 FFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQ 541
FFI + LDG+HVVFG VVEGM V+K++E G+ GK + + I DCG+
Sbjct: 123 FFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKPTSPVKIIDCGE 174
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 196 bits (479), Expect = 6e-51
Identities = 98/173 (56%), Positives = 121/173 (69%), Gaps = 9/173 (5%)
Frame = +2
Query: 53 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSI 208
M + F D+++ G+IVIEL DV PKT ENFR LCTGEKG G YKG+
Sbjct: 1 MGRSKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNR 60
Query: 209 FHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQF 388
FHRVI FM+QGGD + ++GTGG+SIYG KF+DENF LKH G+LSMAN+G +TNGSQF
Sbjct: 61 FHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQF 120
Query: 389 FITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFG-SQSGKTSKRIVIKDCGQI 544
FITT +TS LDG+HVVFG V +GM VV+ IE + S+ +VI DCG+I
Sbjct: 121 FITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIHDCGEI 173
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 188 bits (458), Expect = 2e-48
Identities = 90/168 (53%), Positives = 118/168 (70%), Gaps = 7/168 (4%)
Frame = +2
Query: 62 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE-----KGFGYKGSIFHRVIP 226
P VFFDV++ P G+I +EL +D+ PKT ENFR CTGE K GYK FHRVI
Sbjct: 32 PVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIK 91
Query: 227 NFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVK 406
+FM+Q GDF ++G+G SIYG+KFEDENFT KHTGPG+LSMAN+G +TNG QFFIT K
Sbjct: 92 DFMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAK 151
Query: 407 TSWLDGRHVVFGNVV-EGMEVVKQIETFG-SQSGKTSKRIVIKDCGQI 544
WLD +HVVFG V+ +G+ V+++IE + + +VI +CG++
Sbjct: 152 CDWLDNKHVVFGRVLGDGLLVMRKIENVAIGPNNRPKLAVVITECGEM 199
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 186 bits (452), Expect = 1e-47
Identities = 92/168 (54%), Positives = 115/168 (68%), Gaps = 8/168 (4%)
Frame = +2
Query: 65 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKG-------FGYKGSIFHRVI 223
RVF DV +D LG+IVI L V PKT ENFRALCTGEKG YKG+ FHR+I
Sbjct: 48 RVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRII 107
Query: 224 PNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTV 403
F++QGGD + +G SIYG F DENF ++H+ G+++MAN G D+NGSQFFITTV
Sbjct: 108 SGFVIQGGDIIHGDGKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTV 167
Query: 404 KTSWLDGRHVVFGNVVEGMEVVKQIE-TFGSQSGKTSKRIVIKDCGQI 544
K SWL+G HVV G V++GM+ V IE G+ SGK K++VI D G+I
Sbjct: 168 KASWLEGEHVVLGKVIQGMDNVFAIEGGAGTYSGKPRKKVVIADSGEI 215
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 159 bits (386), Expect = 1e-39
Identities = 81/172 (47%), Positives = 104/172 (60%), Gaps = 8/172 (4%)
Frame = +2
Query: 50 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 205
K P+VF DV++D P +V EL +V PKT ENFRALCTGEKG G YKGS
Sbjct: 3 KKKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGS 62
Query: 206 IFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQ 385
FHR++ Q GDF N NGT G+SIY KF DE+ L+H G+LSM+ A D GS
Sbjct: 63 FFHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSH 122
Query: 386 FFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQ 541
F IT LD +VVFG +++G E++K+IE G + GK + + I CG+
Sbjct: 123 FHITFRPNQQLDRNNVVFGKLIQGKEILKKIERVGDEEGKPTVSVKIIRCGE 174
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 144 bits (348), Expect = 5e-35
Identities = 81/180 (45%), Positives = 113/180 (62%), Gaps = 11/180 (6%)
Frame = +2
Query: 53 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 211
M+ P+VFFD+TVD P G+IVIEL +D+TP+T ENFR LCTGE+G G YKGS F
Sbjct: 1 MANPKVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTF 60
Query: 212 HRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKH-TGPGVLSMANAGADTNGSQF 388
++P+ M GGD N + I+ + +DE F L H GPG++SM AD+NGSQF
Sbjct: 61 DHIVPDLMWCGGDIIFEN----EPIHSEELDDEYFILNHEDGPGIISM----ADSNGSQF 112
Query: 389 FITTVKTS-WLDGRHVVFGNVVEGMEVVKQI--ETFGSQSGKTSKRIVIKDCGQIA*FKS 559
I +DG HVV G VVEG+++++ I E + + SK +VI DCG+++ ++S
Sbjct: 113 QIHMKDYGLQVDGDHVVIGKVVEGLDLMRNIEKEVITTTTRTPSKPVVIADCGELSDYRS 172
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 136 bits (330), Expect = 7e-33
Identities = 68/135 (50%), Positives = 94/135 (69%), Gaps = 1/135 (0%)
Frame = +2
Query: 77 DVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFT 256
+VT++ + +G +E+ +P+TC NF L +G+ Y +FHR++ +F++QGGD T
Sbjct: 11 EVTLETS-MGPFTVEMYYKHSPRTCRNFLEL--SRRGY-YDNVLFHRIVKDFIVQGGDPT 66
Query: 257 NHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHV 433
G GG+SIYG+KFEDE N LKHTG G+LSMANAG +TNGSQFFIT LDG+H
Sbjct: 67 G-TGRGGESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHT 125
Query: 434 VFGNVVEGMEVVKQI 478
+FG V GMEV+K++
Sbjct: 126 IFGRVCRGMEVIKRL 140
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 134 bits (323), Expect = 5e-32
Identities = 71/128 (55%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Frame = +2
Query: 101 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 280
LG I ++L + PKT ENF C G+ Y +FHRVI FM+Q GD +GTGG+
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHC--RNGY-YDNHLFHRVIRGFMIQTGDPLG-DGTGGQ 539
Query: 281 SIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEG 457
SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV T WLD +H VFG VV+G
Sbjct: 540 SIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKG 599
Query: 458 MEVVKQIE 481
M+VV+ IE
Sbjct: 600 MDVVQGIE 607
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 123 bits (297), Expect = 7e-29
Identities = 64/127 (50%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
Frame = +2
Query: 104 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 283
G + IEL D+ P+ CENF LC E+G+ Y G FHR I NFM+QGGD T G GG+S
Sbjct: 353 GDLNIELHCDIAPRACENFITLC--ERGY-YNGVAFHRSIRNFMIQGGDPTG-TGKGGES 408
Query: 284 IYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 460
I+G F+DE N L H+G GV+SMAN+G TNGSQFF+ + L+ +H VFG VV G+
Sbjct: 409 IWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGL 468
Query: 461 EVVKQIE 481
+ +E
Sbjct: 469 ATLAAME 475
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 122 bits (295), Expect = 1e-28
Identities = 66/128 (51%), Positives = 82/128 (64%), Gaps = 1/128 (0%)
Frame = +2
Query: 101 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 280
LG I E+ D PK+ ENF ALC G+ Y G+IFHR I FM+QGGD G GG
Sbjct: 9 LGDIKCEIFCDEVPKSAENFLALCAS--GY-YDGTIFHRNIKGFMIQGGD-PKGTGKGGT 64
Query: 281 SIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEG 457
SI+G KF DE +LKH G+LSMAN+G +TNGSQFFIT K L+G + +FG V+ G
Sbjct: 65 SIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVIHG 124
Query: 458 MEVVKQIE 481
EV+ +E
Sbjct: 125 FEVLDIME 132
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 103 bits (247), Expect = 8e-23
Identities = 56/117 (47%), Positives = 76/117 (64%), Gaps = 2/117 (1%)
Frame = +2
Query: 104 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 283
G I +EL PK+ NF LC +G+ + +IFHRVIP F++QGGD T +GTGG S
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL--EGY-FDNTIFHRVIPGFLVQGGDPTG-SGTGGDS 77
Query: 284 IYGNKFEDE-NFTLKHTGPGVLSMANAGA-DTNGSQFFITTVKTSWLDGRHVVFGNV 448
IYG F DE + L+ + G+++MANA + ++NGSQFF T K WLD +H +FG V
Sbjct: 78 IYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFGKV 134
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 95.1 bits (226), Expect = 3e-20
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 10/153 (6%)
Frame = +2
Query: 101 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 280
LG IVI+L SD P TC+NF LC K Y G +FH V +F Q GD T G GG
Sbjct: 9 LGDIVIDLHSDKCPLTCKNFLKLC---KIKYYNGCLFHTVQKDFTAQTGDPTG-TGAGGD 64
Query: 281 SI----YGNK---FEDE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHV 433
SI YG + ++DE + LKH+ G ++MA+ G + N SQF+ T +LDG+H
Sbjct: 65 SIYKFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHT 124
Query: 434 VFGNVVEGMEVVKQI-ETFGSQSGKTSKRIVIK 529
VFG + EG + + +I E + + K I IK
Sbjct: 125 VFGQIAEGFDTLTRINEAYVDPKNRPYKNIRIK 157
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 59.7 bits (138), Expect = 1e-09
Identities = 37/130 (28%), Positives = 64/130 (49%)
Frame = +2
Query: 92 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGT 271
D G + IEL D P + F C + G+ +KG +F RV+ +F++Q GD +
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFC--QDGY-FKGFLFSRVVKHFVIQAGDSAEFDAV 139
Query: 272 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 451
++ + +LKH ++ A + G +FFI + + L+ + VFG V
Sbjct: 140 KDWALDRKNIDT---SLKHE-EFMVGTPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRVS 195
Query: 452 EGMEVVKQIE 481
+G +VV++IE
Sbjct: 196 KGQDVVQEIE 205
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 50.4 bits (115), Expect = 8e-07
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 20/152 (13%)
Frame = +2
Query: 89 DDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPN--FML--QGGDF- 253
D PLG++V+ L P T F+ +CT YK + H++ P F+ QGG
Sbjct: 81 DSTPLGRVVLGLYGRHVPITVSTFKRMCTSSST-SYKNTPVHKIFPGQYFLAGRQGGGRR 139
Query: 254 -TNHNGTGGKSIYGNK--FEDENFTLKHTGPGVLSMANAGADTNGS----------QFFI 394
T G + + N + F L H GV+S+ + D + +F I
Sbjct: 140 DTAEVGYSLRDLPRNTDVVNSKAFLLPHARAGVVSLCLSENDDDDDIRLDPDYRNVEFLI 199
Query: 395 TTVK--TSWLDGRHVVFGNVVEGMEVVKQIET 484
TT + LDG ++VFG V+EG++VV I +
Sbjct: 200 TTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 231
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 48.8 bits (111), Expect = 2e-06
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +2
Query: 65 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 244
+ F DV++D P+G+I+I L D P F ++ +G+ G Y+ F +++P ++ G
Sbjct: 93 KAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYVQHG 152
Query: 245 G 247
G
Sbjct: 153 G 153
Score = 33.5 bits (73), Expect = 0.10
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 374 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTS 511
NG++F IT V + L+ +V G V+EGM VV+++ + TS
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKMREVKTVRDNTS 275
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 47.2 bits (107), Expect = 8e-06
Identities = 35/126 (27%), Positives = 60/126 (47%)
Frame = +2
Query: 104 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 283
G I +EL + +P+ + F LC + +KG F RVI N+++Q G + +
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPSSIPVEEWT 146
Query: 284 IYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGME 463
G + KH + + N G + + ITT L+ + +VFG V++G +
Sbjct: 147 AKGKLRGRLHIGPKHEAFMLGTPKNKG-NNKDFELLITTAPIPDLNDQLIVFGRVLKGED 205
Query: 464 VVKQIE 481
VV++IE
Sbjct: 206 VVQEIE 211
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 47.2 bits (107), Expect = 8e-06
Identities = 35/126 (27%), Positives = 60/126 (47%)
Frame = +2
Query: 104 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 283
G I +EL + +P+ + F LC + +KG F RVI N+++Q G + +
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPSSIPVEEWT 146
Query: 284 IYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGME 463
G + KH + + N G + + ITT L+ + +VFG V++G +
Sbjct: 147 AKGKLRGRLHIGPKHEAFMLGTPKNKG-NNKDFELLITTAPIPDLNDQLIVFGRVLKGED 205
Query: 464 VVKQIE 481
VV++IE
Sbjct: 206 VVQEIE 211
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 47.2 bits (107), Expect = 8e-06
Identities = 35/126 (27%), Positives = 60/126 (47%)
Frame = +2
Query: 104 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 283
G I +EL + +P+ + F LC + +KG F RVI N+++Q G + +
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPSSIPVEEWT 146
Query: 284 IYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGME 463
G + KH + + N G + + ITT L+ + +VFG V++G +
Sbjct: 147 AKGKLRGRLHIGPKHEAFMLGTPKNKG-NNKDFELLITTAPIPDLNDQLIVFGRVLKGED 205
Query: 464 VVKQIE 481
VV++IE
Sbjct: 206 VVQEIE 211
>At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related weak hit to Pfam PF00234:
Protease inhibitor/seed storage/LTP family
Length = 219
Score = 31.5 bits (68), Expect = 0.41
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -2
Query: 480 SICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSS 301
++ T PS++ P TC ++E+ V+ P VS+P M TP P+C V F+SS
Sbjct: 22 AVTATQQAPSSSPPVLTC---TEEL--VMFSPCLPYVSSPPNNMSETPDPICCSV-FTSS 75
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 30.3 bits (65), Expect = 0.94
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +3
Query: 135 SLPRRVKTSVPCALARKASVTRAPF-----SIVSSPISCCKEGTSPTITALGESPSTAIS 299
S PR S ++R A+ TR P SIVSS SPT+ +L ++PS
Sbjct: 225 SNPRPSSASSKKPVSRPATPTRRPSTPTGPSIVSSKAPSRGTSPSPTVNSLSKAPSRG-- 282
Query: 300 LKTRISPLSTLDLASSPWLMP 362
SP TL+ +S PW P
Sbjct: 283 ----TSPSPTLN-SSRPWKPP 298
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 28.3 bits (60), Expect = 3.8
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 156 TSVPCALARKASVTRAPFS--IVSSPISCCKEGTSPTITALGESPSTAISLKTRISP 320
TS P +A K+S T P S + S P S + +SP + SPS A T SP
Sbjct: 235 TSPPAPMAPKSSSTIPPSSAPMTSPPGSMAPKSSSPVSNSPTVSPSLAPGGSTSSSP 291
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 28.3 bits (60), Expect = 3.8
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +2
Query: 248 DFTNHNG-TGGKSIYGNKFEDENFTLKHTGPGVLSM---ANAGADTNGSQFFITTVKTSW 415
+F N N T S + + E+E KH+ L + A +G DTNG FF KT+
Sbjct: 517 NFANSNYLTERTSRWIEECEEEEAQEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTA 576
Query: 416 LDGRHVVFGNVVEGMEVVKQIETFGSQ 496
+VF N + EVV++++ Q
Sbjct: 577 KKDIELVFVNPLS--EVVEKLQRADEQ 601
>At5g07270.1 68418.m00829 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 513
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 192 VTRAPFSIVSSPISCCKEGTSPTITALG 275
VT +PF V+ P+ C EGT P G
Sbjct: 429 VTCSPFPSVNIPMCTCNEGTCPNFETHG 456
>At3g20020.1 68416.m02533 protein arginine N-methyltransferase
family protein similar to SP|Q96LA8 Protein arginine
N-methyltransferase 6 (EC 2.1.1.-) {Homo sapiens}
Length = 435
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 219 SSPISCCKEGTSPTITALGES---PSTAISLKTRISPLSTLDLASSP 350
S P S + TS T A G S PS ++ K R +P L L++SP
Sbjct: 327 SGPASSPAKNTSETSIASGSSSISPSGEVNQKKRTNPSDALVLSTSP 373
>At1g72540.1 68414.m08388 protein kinase, putative similar to
auxin-regulated dual specificity cytosolic kinase
[Lycopersicon esculentum] gi|14484938|gb|AAK62821;
similar to serine/threonine protein kinase
gi|1066501|gb|AAA81538
Length = 450
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 36 LLIPAKCLYHEYSSTSLLTMPHWEKLLLS*EVTSLPRRVKTS 161
+ +P C+ + + T P EKLLL TS+P RV S
Sbjct: 8 ICLPISCINNTNQKKTTTTNPPKEKLLLLSRQTSVPSRVYMS 49
>At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) similar
to putative ethylene receptor; ETR2 [Arabidopsis
thaliana] gi|3687654|gb|AAC62208.
Length = 773
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -1
Query: 448 NIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLK 320
N+ D+ S+ + S D+E+G + S G G+D V K
Sbjct: 543 NVENDDSSSQSFASVSSRDQEVGDVRFSGGYGLGQDLSFGVCK 585
>At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 396 VMKNWEPLVSAPALAMERTPGPVCLR 319
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 396 VMKNWEPLVSAPALAMERTPGPVCLR 319
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At2g16030.1 68415.m01838 expressed protein
Length = 231
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 531 SLITILLEVFPDWLPKVSICLTT-SMPSTTFPKTTCLPSSQEVLTVVMKN 385
S+ T+L+ + PK I S P T FP++TC S ++ L + KN
Sbjct: 18 SIGTVLMVIMILQTPKTCISPEAPSKPHTHFPRSTCDSSPRQHLPLPKKN 67
>At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar to
beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
GI:8918271 from [Pisum sativum]
Length = 769
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -2
Query: 441 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDFP 274
PK +PS E +V +W + A ER P P+ K ++ L DFP
Sbjct: 666 PKKRYIPSEGERSNLVQTSWAMMGLLHAGQAERDPSPLHRAAKLLINSQLENGDFP 721
>At1g03590.1 68414.m00339 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2C;
PP2C (GI:3643088) [Mesembryanthemum crystallinum];
contains Pfam PF00481 : Protein phosphatase 2C domain;
Length = 447
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 396 VMKNWEPLVSAPALAMERTPGPVCLR 319
V + W P +AP LAM R G CL+
Sbjct: 240 VSRVWLPFDNAPGLAMARAFGDFCLK 265
>At5g61030.1 68418.m07659 RNA-binding protein, putative similar to
RNA-binding protein from [Solanum tuberosum]
GI:15822705, [Nicotiana tabacum] GI:15822703, [Nicotiana
sylvestris] GI:624925; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 309
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +2
Query: 242 GGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGS 382
GGD T H G GG F T G G + A A D NGS
Sbjct: 188 GGDATGHGGAGGGYGSSGGFGSSGNTY---GEGSSASAGAVGDYNGS 231
>At5g15870.1 68418.m01857 glycosyl hydrolase family 81 protein
similar to beta-glucan-elicitor receptor GI:1752734 from
[Glycine max]
Length = 745
Score = 27.1 bits (57), Expect = 8.7
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 276 PPVPLWLVKSPPCSMKLGMTRWKMEP-L*PKPFSPV--HRARKFSHVL 142
PP+PL SPP S ++ +R K P L P+ S V +R FSH L
Sbjct: 29 PPLPLPPSPSPPPSQQMSSSRQKNTPFLFPRSDSSVLPDPSRFFSHDL 76
>At4g10840.2 68417.m01764 kinesin light chain-related low similarity
to kinesin light chain [Plectonema boryanum] GI:2645229;
contains Pfam profile PF00515 TPR Domain
Length = 531
Score = 27.1 bits (57), Expect = 8.7
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = -2
Query: 462 SMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*M 283
+MP KT PS L V + + +PL + P M++TP R K S +
Sbjct: 3 AMPGLVSVKT---PSDTPPLRVAVPDTQPLSNPPRTPMKKTPSSTPSRSKPSPNRSTGKK 59
Query: 282 DFPPV 268
D P V
Sbjct: 60 DSPTV 64
>At4g10840.1 68417.m01765 kinesin light chain-related low similarity
to kinesin light chain [Plectonema boryanum] GI:2645229;
contains Pfam profile PF00515 TPR Domain
Length = 609
Score = 27.1 bits (57), Expect = 8.7
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = -2
Query: 462 SMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*M 283
+MP KT PS L V + + +PL + P M++TP R K S +
Sbjct: 3 AMPGLVSVKT---PSDTPPLRVAVPDTQPLSNPPRTPMKKTPSSTPSRSKPSPNRSTGKK 59
Query: 282 DFPPV 268
D P V
Sbjct: 60 DSPTV 64
>At3g08840.2 68416.m01026 D-alanine--D-alanine ligase family similar
to D-alanine--D-alanine ligase (EC 6.3.2.4)
(D-alanylalanine synthetase) (D-Ala-D-Ala ligase)
(Swiss-Prot:O51218) [Borrelia burgdorferi]; similar to
D-alanine--D-alanine ligase (EC 6.3.2.4)
(D-alanylalanine synthetase) (D-Ala-D-Ala ligase).
(Swiss-Prot:P95803) [Streptococcus mutans]
Length = 937
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 343 DARSSVLKGEILVFKLIAVDGLSPSAVMV 257
DA V GE+LV ++ V G++PS V++
Sbjct: 881 DAFVHVETGEVLVIEVNTVPGMTPSTVLI 909
>At3g04140.1 68416.m00438 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 656
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 198 RAPFSIVSSPISCCKEGTSPTITALGESPSTAISLK 305
R P + SP SC + P T G+ PS ++ LK
Sbjct: 520 RVPLREMYSPSSCSRGKAFPMRTESGDLPSLSVRLK 555
>At2g33420.1 68415.m04096 expressed protein
Length = 1039
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = +2
Query: 98 PLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGG 277
P GK+ R D+ E F C GFG + ++ N GD G+GG
Sbjct: 32 PFGKLEGLDRDDIRETAYEIFFTACRSSPGFGGRTALTFYSNHNSNDHHGDGGGGIGSGG 91
Query: 278 KSIYGNKF 301
+ G+ F
Sbjct: 92 STGVGSGF 99
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,961,252
Number of Sequences: 28952
Number of extensions: 334704
Number of successful extensions: 1114
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1092379416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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