Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d23r
(775 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g24200.1 68416.m03037 monooxygenase family protein low simila... 38 0.006
At2g29720.1 68415.m03612 monooxygenase family protein nearly ide... 34 0.12
At4g15760.1 68417.m02399 monooxygenase, putative (MO1) similar t... 33 0.16
At1g24340.1 68414.m03070 monooxygenase family protein similar to... 33 0.28
At2g35660.2 68415.m04374 monooxygenase family protein nearly ide... 32 0.49
At2g35660.1 68415.m04373 monooxygenase family protein nearly ide... 32 0.49
At1g50890.1 68414.m05722 expressed protein 31 0.85
At5g16420.1 68418.m01919 pentatricopeptide (PPR) repeat-containi... 30 2.0
At4g04740.1 68417.m00695 calcium-dependent protein kinase, putat... 29 2.6
At5g05320.1 68418.m00573 monooxygenase, putative (MO3) similar t... 29 3.4
At4g38540.1 68417.m05456 monooxygenase, putative (MO2) identical... 29 3.4
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 28 6.0
At5g25000.1 68418.m02963 hypothetical protein 28 7.9
>At3g24200.1 68416.m03037 monooxygenase family protein low
similarity to VisC [Escherichia coli][GI:216629];
contains Pfam profile: PF01360 Monooxygenase
Length = 507
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -1
Query: 628 PLIAIKCRPYNVEDKALIIGDAAHAVVPFYGQGMNAGFEDCTILNQ 491
PL + Y V + ++GD+AH V P GQG+N GF D L++
Sbjct: 378 PLSLRHAKDY-VSKRVALVGDSAHTVHPLAGQGVNLGFADACALSK 422
>At2g29720.1 68415.m03612 monooxygenase family protein nearly
identical to CTF2B [GI:4164578][Plant Physiol. 119, 364
(1999), PGR99-008]
Length = 427
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = -1
Query: 604 PYNVEDKALIIGDAAHAVVPFYGQGMNAGFEDCTIL-NQLFQKHH---DDLAKILKEFSD 437
P + + +++GDA H + P GQG ED +L N+L + + + ++ +
Sbjct: 317 PSASKGRVVLVGDAWHPMTPNLGQGACCALEDSVLLANKLASAINGGTESVEGAMESYRS 376
Query: 436 TRWEDTFAISDLA 398
RW F ++ LA
Sbjct: 377 ERWSQVFRLTVLA 389
>At4g15760.1 68417.m02399 monooxygenase, putative (MO1) similar to
GI:3426062
Length = 348
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 577 IIGDAAHAVVPFYGQGMNAGFEDCTILNQ-LFQKHHDDLAKILKEFS 440
+ GDA H + PF QG +A ED +L + L +K D +LK+ S
Sbjct: 235 VAGDAMHVMGPFLAQGGSAALEDAVVLARCLARKVGPDHGDLLKDCS 281
>At1g24340.1 68414.m03070 monooxygenase family protein similar to
polyketide hydroxylases from several bacterial species;
contains Pfam:PF01360 [Monooxygenase]
Length = 707
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 592 EDKALIIGDAAHAVVPFYGQGMNAGFED 509
E++ ++ GDAAH P G GMN G +D
Sbjct: 387 ENRVILAGDAAHRFPPAGGFGMNTGIQD 414
>At2g35660.2 68415.m04374 monooxygenase family protein nearly
identical to CTF2A [GI:4164576][Plant Physiol. 119, 364
(1999), PGR99-008]
Length = 325
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = -1
Query: 586 KALIIGDAAHAVVPFYGQGMNAGFEDCTIL-NQLFQKHH---DDLAKILKEFSDTRWEDT 419
+ +++GDA H + P GQG ED +L N+L + + + ++ + RW
Sbjct: 211 RVVLVGDAWHPMTPNLGQGACCALEDSVVLANKLANAINGGTESIEVAMESYGSERWSRA 270
Query: 418 FAIS 407
F ++
Sbjct: 271 FPLT 274
>At2g35660.1 68415.m04373 monooxygenase family protein nearly
identical to CTF2A [GI:4164576][Plant Physiol. 119, 364
(1999), PGR99-008]
Length = 439
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = -1
Query: 586 KALIIGDAAHAVVPFYGQGMNAGFEDCTIL-NQLFQKHH---DDLAKILKEFSDTRWEDT 419
+ +++GDA H + P GQG ED +L N+L + + + ++ + RW
Sbjct: 325 RVVLVGDAWHPMTPNLGQGACCALEDSVVLANKLANAINGGTESIEVAMESYGSERWSRA 384
Query: 418 FAIS 407
F ++
Sbjct: 385 FPLT 388
>At1g50890.1 68414.m05722 expressed protein
Length = 821
Score = 31.1 bits (67), Expect = 0.85
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 589 LLHCKVDT*SQSKAKLIRQNSRLLTFVFLS-AELNLGNIFRKTSIIYLR 732
LLHC D+ S KA + R++ RLL+F+ LS +L+ + + S I R
Sbjct: 78 LLHCLFDSSSDLKAPVKRESIRLLSFLCLSYTDLSFSQLAKIISHIVKR 126
>At5g16420.1 68418.m01919 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 535
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 468 IWLKY*KNSLTPDGRILLQLVIWLC 394
+W K KN+ PD +L L+ WLC
Sbjct: 353 LWRKMLKNNCMPDNALLSTLIHWLC 377
>At4g04740.1 68417.m00695 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Lycopersicon esculentum]
gi|19171502|emb|CAC87494
Length = 520
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/57 (31%), Positives = 22/57 (38%)
Frame = -1
Query: 688 SIPLIGKQKLIADYFAGSASPLIAIKCRPYNVEDKALIIGDAAHAVVPFYGQGMNAG 518
SIP+I Q I D P I P +V D I+G + FY G G
Sbjct: 20 SIPIIPVQTHIVDQVPDHRKPQIPSPSIPISVRDPETILGKPFEDIRKFYSLGRELG 76
>At5g05320.1 68418.m00573 monooxygenase, putative (MO3) similar to
GI:3426064; identical to cDNA monooxygenase 3, partial
GI:3426065
Length = 406
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 592 EDKALIIGDAAHAVVPFYGQGMNAGFEDCTIL 497
+D + GDA H + P GQG + ED IL
Sbjct: 282 KDNVCVAGDALHPMTPDIGQGGCSAMEDGVIL 313
>At4g38540.1 68417.m05456 monooxygenase, putative (MO2) identical to
GI:3426064
Length = 407
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 592 EDKALIIGDAAHAVVPFYGQGMNAGFEDCTIL 497
+D + GDA H + P GQG + ED IL
Sbjct: 283 KDNVCVAGDALHPMTPDIGQGGCSAMEDGVIL 314
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 548 NHSVSCVTNDQSFVFYIVRSTLNRNQRRS*SGKIVGY 658
+H + CVT DQ F FY V + + S ++VGY
Sbjct: 322 DHGLLCVTADQQFFFYSVVENVEETELVL-SKRLVGY 357
>At5g25000.1 68418.m02963 hypothetical protein
Length = 121
Score = 27.9 bits (59), Expect = 7.9
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Frame = -1
Query: 649 YFAGSASPLIAIKCRPYNVEDKALIIGDAAHAVVPFYGQGMN--AGFEDCTILNQLFQKH 476
+ GS S L RP + D+ L+ V P Y Q M+ E ++L L ++
Sbjct: 6 WLLGSVSELEKAYARPDDKSDRFLVCARYLSIVQPSYEQIMSKEEDLEVISVLGDLNEEE 65
Query: 475 HDD-LAKILKE---FSDTRWEDTFAISDLAMYNYIEMRD 371
D+ L +LK FS+ W+ + + IE+ D
Sbjct: 66 DDNVLMHLLKNNYVFSELDWKRGYPLLQHQKDEEIEIED 104
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,568,796
Number of Sequences: 28952
Number of extensions: 319362
Number of successful extensions: 809
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1726528800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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