Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d23f
         (576 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    25   1.3  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   1.8  
AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    23   5.4  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   7.1  

>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +2

Query: 197 WRFGGITRSIIFGEERTSRSPVRISRRHKKYSTGP 301
           WRF G+ R++   + + S   +R     + +ST P
Sbjct: 231 WRFAGLRRNMTLPKRKPSNLEIRRQLSFQYFSTHP 265


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = +3

Query: 330 IRGRTALREVGLEDHMINNHGIPMKGRNIHRIDGSTYIIPYDSRT 464
           +RG   + ++ L  H  N+H  PM   N + +  ++  +P  + T
Sbjct: 443 VRGMDLMDDMPLPYHDHNHHNSPMSPINFNLLSAASTAVPNPAAT 487


>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = +1

Query: 208 WDHSKHYFWRREDIAF 255
           W H +++FW+   +A+
Sbjct: 19  WIHRRYHFWKDRSVAY 34


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 402  KGRNIHRIDGSTYIIPYDSRTKQ 470
            KG N   +DG+T II +DS  ++
Sbjct: 1684 KGTNSSPLDGTTTIIIHDSEDEK 1706


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,934
Number of Sequences: 2352
Number of extensions: 11374
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)