Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d22r
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 33 0.22
U00063-5|AAK18963.1| 182|Caenorhabditis elegans Hypothetical pr... 30 1.5
U41016-8|ABC71806.1| 212|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68213-1|CAA92435.2| 487|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81099-2|CAB03188.2| 297|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z75714-11|CAB00063.2| 723|Caenorhabditis elegans Hypothetical p... 28 8.2
Z75714-10|CAN99711.1| 721|Caenorhabditis elegans Hypothetical p... 28 8.2
AF024500-4|AAB70365.1| 335|Caenorhabditis elegans Hypothetical ... 28 8.2
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -2
Query: 284 EPTPK-ESEPFKSVVPDNKPFGYPFDRPV-LPQYFKQPNMFFKKVLVYHEGELFPYLFNI 111
+PTPK +SEPF +P +KP PF P+ P+ +P K + H+ + FP
Sbjct: 7 KPTPKPKSEPFPKPMPKSKPKSEPFPSPMPFPKPMPKPKP-KPKPMPKHKPKPFPKPMLF 65
Query: 110 PHYTP 96
P P
Sbjct: 66 PKPMP 70
Score = 31.5 bits (68), Expect = 0.66
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -2
Query: 299 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRP-VLPQYFKQP---NMFFKKVLVYHEGEL 132
F P + +SEPF S +P KP P +P +P++ +P M F K + H+ +
Sbjct: 17 FPKPMPKSKPKSEPFPSPMPFPKPMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPKHKPKP 76
Query: 131 FPYLFNIPHYTP 96
FP P P
Sbjct: 77 FPKPMLFPKPMP 88
>U00063-5|AAK18963.1| 182|Caenorhabditis elegans Hypothetical
protein F56C9.8 protein.
Length = 182
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = -2
Query: 293 YPYEPTPKESEPFKSVV--PDNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYHEGELFPYL 120
+PY P P ++ + + + P N P P + QY QP + LV + +
Sbjct: 82 FPYNPAPTQNYDYNAPIRTPVNPTSFTPV--PSVTQYSTQPQQYSNVPLVTPTTQQYIQN 139
Query: 119 FNIPHYTPD 93
+IP Y PD
Sbjct: 140 QSIPQYAPD 148
>U41016-8|ABC71806.1| 212|Caenorhabditis elegans Hypothetical
protein R11G1.2 protein.
Length = 212
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -2
Query: 350 LMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQ-YFKQPN 174
L++ Y G + Y T +S+ F VP KP GY D P+ P+ Y
Sbjct: 91 LLMDSDEYCGLSIENVYTRYITSETIDQSDTFGYNVP--KPIGYKGDEPIWPRSYGYSAE 148
Query: 173 MFF 165
MFF
Sbjct: 149 MFF 151
>Z68213-1|CAA92435.2| 487|Caenorhabditis elegans Hypothetical
protein C01F6.2 protein.
Length = 487
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 278 TPKESEPFKSVVPDNKPFGYPFDRPVLPQ 192
TPK + + VP N+P F RPV+P+
Sbjct: 128 TPKTPDVIRQKVPMNEPVNCVFIRPVIPK 156
>Z81099-2|CAB03188.2| 297|Caenorhabditis elegans Hypothetical
protein K08F9.3 protein.
Length = 297
Score = 27.9 bits (59), Expect = 8.2
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Frame = -2
Query: 407 DQGKIPTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYP-YEPTPKESEPFKSVVPDNK 231
D I D+F+ D+ P +P Y+ F + P Y P P +P P
Sbjct: 8 DPDSISPDVFDPYDSTP---YVPDA-YNPDMFNPYNNTVPDYIPVPSRPDPQSIYFPT-- 61
Query: 230 PFGYPFDRPVLPQYFKQPNMFFKKVLVYHEGELFPYLFNIPHYTPDK 90
G RP Y K + VL++ G+LF ++ N+ TPD+
Sbjct: 62 VIGNANRRPFAGLYVKI--LLGCLVLLFFFGDLFYFILNVKVTTPDQ 106
>Z75714-11|CAB00063.2| 723|Caenorhabditis elegans Hypothetical
protein ZC434.6b protein.
Length = 723
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -3
Query: 154 WSTMKENYSPIYLTFLTIHQIKRNYNALIRKSKRTLTITVYNS 26
W++ YS Y L ++ I+R+ + ++ SK I +YNS
Sbjct: 74 WNSFYPKYSGKYWALLPVNLIRRDTISQLKSSKCLSGIVLYNS 116
>Z75714-10|CAN99711.1| 721|Caenorhabditis elegans Hypothetical
protein ZC434.6a protein.
Length = 721
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -3
Query: 154 WSTMKENYSPIYLTFLTIHQIKRNYNALIRKSKRTLTITVYNS 26
W++ YS Y L ++ I+R+ + ++ SK I +YNS
Sbjct: 74 WNSFYPKYSGKYWALLPVNLIRRDTISQLKSSKCLSGIVLYNS 116
>AF024500-4|AAB70365.1| 335|Caenorhabditis elegans Hypothetical
protein K06H6.6 protein.
Length = 335
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 152 VYHEGELFPYLFNIPHYTPDK 90
VY G L PY + +PH+TP K
Sbjct: 302 VYRNGGLNPYDYYLPHWTPLK 322
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,688,302
Number of Sequences: 27780
Number of extensions: 331793
Number of successful extensions: 980
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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