Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d21r
(660 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1125 + 31085106-31085714 36 0.029
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 35 0.066
02_05_0814 - 31970558-31971126,31971242-31971413 33 0.27
01_01_0070 - 542603-542686,542803-543441 32 0.35
09_04_0382 + 17135554-17136468,17136762-17136833,17137675-171377... 32 0.47
07_03_1432 - 26508135-26508881,26509301-26509708 32 0.47
09_06_0081 + 20745627-20748144,20748211-20748308 31 0.81
04_04_0189 + 23438794-23439053,23439178-23439400,23439947-23440819 31 1.1
07_03_1433 + 26513728-26514135,26525534-26526280 30 1.4
04_01_0602 - 7928516-7928520,7928877-7928958,7929039-7929179,792... 30 1.4
10_06_0179 - 11508235-11508245,11508555-11508942 30 1.9
02_04_0021 + 18975992-18976408 30 1.9
09_04_0204 - 15565684-15566223,15567272-15567678,15568143-155684... 29 2.5
08_02_0600 - 19166283-19166851,19166988-19168839,19169347-191694... 29 2.5
01_06_1762 - 39716723-39717016,39717256-39717332,39717452-397174... 29 2.5
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 29 3.3
06_03_0905 + 25843547-25844314 29 3.3
05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023 29 3.3
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 3.3
02_05_0212 - 26808484-26809368 29 3.3
02_04_0536 + 23730396-23731736 29 3.3
07_03_1546 + 27602598-27602917,27602995-27603052,27603130-276032... 29 4.3
04_03_0904 + 20717005-20718087 29 4.3
03_05_1081 + 30235677-30236474 29 4.3
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 4.3
01_02_0031 + 10364487-10365407 29 4.3
12_02_1174 - 26696869-26698191 28 5.7
11_06_0578 + 25176304-25176388,25176503-25177032,25177267-251779... 28 5.7
10_03_0023 - 7151465-7152111,7152222-7152405 28 5.7
09_06_0184 - 21413275-21414267 28 5.7
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 28 5.7
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 28 5.7
04_04_1672 - 35242468-35243235,35243481-35243645 28 5.7
03_05_0524 - 25181432-25181483,25181565-25181691,25181776-251818... 28 5.7
11_01_0066 - 536281-537196,537397-537452 28 7.6
08_01_0261 + 2131189-2131737 28 7.6
07_01_0577 - 4286048-4286186,4286600-4286660,4286957-4287089,428... 28 7.6
06_03_0996 + 26731442-26732121,26732573-26732772,26732930-26733330 28 7.6
05_04_0419 + 21103418-21103597,21103768-21103931,21104420-21104846 28 7.6
02_05_0860 - 32296743-32296769,32297328-32297357,32298432-322985... 28 7.6
>04_04_1125 + 31085106-31085714
Length = 202
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGS 281
P P P PT PP P P PTP T TP P +
Sbjct: 48 PPTPTPATPTTPPTPWTPPPATPTPPTPTPWTPTPAT 84
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = -3
Query: 403 TALTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGS 281
T TP P P PT PP P P PTPAT T P +
Sbjct: 58 TPPTPWTPPPATPT-PPT---PTPWTPTPATPPPTPATPAT 94
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 34.7 bits (76), Expect = 0.066
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = -3
Query: 403 TALTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGKGSVIKP 224
TA+ P+A T PP ++P P P P RL+ P P N + GS +KP
Sbjct: 203 TAMPPMAAPAPPQTNPPRPVRPPPPPPPPRQRLL-RPLPAESPPPAALANLELTGSPVKP 261
>02_05_0814 - 31970558-31971126,31971242-31971413
Length = 246
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 394 TPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGS 281
TP +P PT P N P P P P+T + TTP P +
Sbjct: 143 TPSSPSSPTPTTP-NPSTPTPTTPYPSTPMPTTPYPST 179
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -3
Query: 400 ALTPVAPKPVHPT-LPPNQIKPVPVYPTPATRLITTPGPGS 281
A+ PV P P P PP + P PV P P T +P P +
Sbjct: 76 AVAPVTPPPPTPKKAPPPPVTPPPVTPPPVTPPPVSPPPAT 116
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -3
Query: 391 PVAPK--PVHPTLP-PNQIKPVPVYPTPATRLITTPGPGS 281
PVAP PV P P P + P PV P P T TP P S
Sbjct: 72 PVAPAVAPVTPPPPTPKKAPPPPVTPPPVTPPPVTPPPVS 111
>09_04_0382 +
17135554-17136468,17136762-17136833,17137675-17137704,
17138744-17138817,17140022-17140367
Length = 478
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPG 290
P AP PV P +PP +PVPV P L PG
Sbjct: 167 PAAPPPVPPPMPP---RPVPVVPKTTAFLGNFPG 197
>07_03_1432 - 26508135-26508881,26509301-26509708
Length = 384
Score = 31.9 bits (69), Expect = 0.47
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 394 TPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNS 251
TP + PV P+ P + P P P+PA +P P S+ V +Y+S
Sbjct: 54 TPPSLAPVSPSPPTTYLPPSPTPPSPAP---ASPSPPSLGLRVGYYSS 98
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -3
Query: 376 PVHPTLPPNQIKPVPVYPTPATRLITTPGPG 284
P PT PP PVP+ PTP + T P PG
Sbjct: 349 PPAPT-PPAPATPVPMPPTPTRLVPTPPAPG 378
>04_04_0189 + 23438794-23439053,23439178-23439400,23439947-23440819
Length = 451
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Frame = -3
Query: 400 ALTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGS----VQQLVTFYNSQGKGSV 233
A AP TLPP ++ VP+ P+ A T P P S TFY S G S+
Sbjct: 16 AADATAPSNTTVTLPPLTLRDVPLLPSAAAATDTIPNPISRHPYFHPPATFYISPGDVSL 75
>07_03_1433 + 26513728-26514135,26525534-26526280
Length = 384
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 394 TPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPG 284
TP +P PV P+ P P P PA + P PG
Sbjct: 54 TPPSPAPVSPSPPTTYPPPSTTPPNPAPTSPSPPAPG 90
>04_01_0602 -
7928516-7928520,7928877-7928958,7929039-7929179,
7929702-7929894,7929914-7929924,7930303-7930392
Length = 173
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 300 VMSRVAGVGYTGTGLIWLGGRVG*TGFGATG 392
V++ ++ G T GL WLG R+G GA G
Sbjct: 10 VLAAISSAGATVAGLRWLGDRIGDRELGACG 40
>10_06_0179 - 11508235-11508245,11508555-11508942
Length = 132
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 406 VTALTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSV 278
VTA +P A + P PP ++ P+P P PA + T P V
Sbjct: 22 VTAQSPSAAPKMAPLPPPPKMAPLP--PPPAAKAPTASAPSPV 62
>02_04_0021 + 18975992-18976408
Length = 138
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -3
Query: 400 ALTPVAPKPVHPTLPPNQIKPVPVYPTPA 314
ALTP PKP PT PP P P P+P+
Sbjct: 94 ALTPPPPKP-KPTPPPPAPTPKPPAPSPS 121
>09_04_0204 -
15565684-15566223,15567272-15567678,15568143-15568446,
15568735-15570065,15570769-15570846,15570943-15571027
Length = 914
Score = 29.5 bits (63), Expect = 2.5
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 227 FDYTSFALAIVESDELLHASRSWGGDE 307
+D++ L+I+E D ++H + W GD+
Sbjct: 745 YDFSREILSILEGDSIIHIEKKWIGDQ 771
>08_02_0600 -
19166283-19166851,19166988-19168839,19169347-19169415,
19171797-19171844,19173500-19173622
Length = 886
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/58 (25%), Positives = 21/58 (36%)
Frame = +2
Query: 302 DEPRRWSRVHWHRLNLVGW*SWMNRLRSYRR*SCHDRFDLSWRHGCRSRLDNRRLCEW 475
D P W R H+ L W + + + D RHGC SR++ W
Sbjct: 772 DTPNSWPRGQVHQFRLALWREHLGQAAFQAAAAAGDDMIYPSRHGCMSRVNQAARQHW 829
>01_06_1762 -
39716723-39717016,39717256-39717332,39717452-39717498,
39717953-39718053,39718271-39718360,39718556-39720133
Length = 728
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGK 242
P++ KP P Q KP P P P + T G S+Q+ Q K
Sbjct: 479 PLSNKPNPPPATSKQPKPSPEKPKPKPQAAATAGAESLQRSTASEKRQAK 528
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKPVPVYPTP 317
P P P P LPPN P+P P P
Sbjct: 434 PPPPPPPPPPLPPNMPPPLPPPPEP 458
>06_03_0905 + 25843547-25844314
Length = 255
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -3
Query: 388 VAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQ 272
V P +PT P P YPTP T P P + Q+
Sbjct: 133 VGPPVTYPTPPVTYPTPPVTYPTPPTTTPCPPPPPATQR 171
>05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023
Length = 620
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 341 ACASVPYSSDAAHHHPRTWKRAAA 270
ACASV S HHH R AAA
Sbjct: 545 ACASVALKSSGCHHHVRAGAAAAA 568
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 287
P P P+ PT PP P + PTPA L P P
Sbjct: 89 PPPPPPLLPTPPP---PPASISPTPAPPLPPPPAP 120
>02_05_0212 - 26808484-26809368
Length = 294
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -3
Query: 406 VTALTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLV 266
V+ P PK ++PP+ PVP+ P PA L P S +Q+V
Sbjct: 70 VSPAKPRKPKAKAASVPPSSPPPVPLGPVPA--LTELPAGHSSRQVV 114
>02_04_0536 + 23730396-23731736
Length = 446
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -3
Query: 382 PKPVHPTLPPNQIKPVPVYPTPATRLITTPG 290
P P P LP + PVY PA RL PG
Sbjct: 124 PPPGFPPLPVPGLADEPVYAAPARRLPPPPG 154
>07_03_1546 + 27602598-27602917,27602995-27603052,27603130-27603252,
27603896-27603992,27604095-27604131,27604244-27604349,
27604547-27604604,27604705-27604802,27604911-27605030,
27605622-27605667,27606336-27606522,27606747-27607263,
27607361-27607453,27608101-27608286,27608364-27608574,
27609263-27609387,27609518-27609664,27610114-27610236,
27610445-27610799,27611076-27611305,27611785-27611877
Length = 1109
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 406 VTALTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQ 272
V P P P+Q+ P PV P +R + + PG VQ+
Sbjct: 918 VPTAPPAVSSATVPGTTPSQMFPGPVANNPTSRFMPSNNPGFVQR 962
>04_03_0904 + 20717005-20718087
Length = 360
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = -3
Query: 394 TPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGK 242
TP A P PT P P P PT + TP P + Y Q K
Sbjct: 101 TPPAHTPTPPTYTPTPTPPKPTPPTYKPQPKPTPAPYTPTPTPPTYKPQPK 151
>03_05_1081 + 30235677-30236474
Length = 265
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = -3
Query: 400 ALTPVAPKP--VHPTLPPNQIKPVPVYPTPATRLITTPGPGSV---QQLVTFYNSQGKGS 236
A P P P +P PP + PV P PA T P + +LVT + QG+
Sbjct: 34 AKIPTYPPPPSAYPAAPPPPVMGQPVPPPPAQLHDPTAPPSPIAKAAELVTRFREQGQAL 93
Query: 235 V 233
+
Sbjct: 94 I 94
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -3
Query: 397 LTPVAPKPVHPT--LPPNQIKPVPVYPTPATRLITTPGP 287
+T +P+PV P+ PP P P P P +L T P P
Sbjct: 335 VTSPSPRPVQPSNAPPPPPPPPPPPPPPPPPKLNTAPKP 373
>01_02_0031 + 10364487-10365407
Length = 306
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 287
P P P P P + P P + TPA L + P P
Sbjct: 176 PALPAPPPPPAPMLPLAPPPTHVTPAMPLSSMPPP 210
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 400 ALTPVAPKPVHPTLPPNQIKPVPVYPTP 317
+L P +P P PT PP+ +KP V P P
Sbjct: 184 SLQPPSPPPPPPTRPPS-VKPPVVQPKP 210
>11_06_0578 +
25176304-25176388,25176503-25177032,25177267-25177997,
25178122-25178172,25178562-25178813,25178894-25179004,
25179102-25179183,25179460-25179489
Length = 623
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKPVPVYPTP---ATRLITTPGPGSVQ 275
P P P HP PP ++ +P PTP ++ T P P VQ
Sbjct: 371 PEPPSPRHPASPP-LLRSLPHQPTPPPSPSQQPTLPAPQPVQ 411
>10_03_0023 - 7151465-7152111,7152222-7152405
Length = 276
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKPVPVYPTPATRLITTP 293
P+ P P+ P PP+ + PV +PTP+ I P
Sbjct: 186 PIPPNPITPA-PPSLVPPV--FPTPSPPSILPP 215
>09_06_0184 - 21413275-21414267
Length = 330
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = -3
Query: 403 TALTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGKGS 236
T++ P P P+ P + P P P+ R T P P + QG GS
Sbjct: 86 TSMESTFPSPRPPSTPSSSTPPSSPVPPPSARSPTVPAPADADD-----DDQGGGS 136
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 394 TPVAPKPVHPTLPPNQIKPVPVYPTPATRLITT 296
TP +P P P PP P P+ PTP T TT
Sbjct: 78 TPPSPPPPPPPPPP---PPPPLSPTPTTTSWTT 107
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 287
P P+ P+ PP Q +P PV P P P P
Sbjct: 73 PTPPQTRPPSPPPQQQQPRPVSPPPVAEPYYWPKP 107
>04_04_1672 - 35242468-35243235,35243481-35243645
Length = 310
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -3
Query: 376 PVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGKG 239
P +P +P Q+ + P + PG SVQ L+ + S+G G
Sbjct: 122 PTYP-VPLGQLDSLAPAPLRLVNQLPGPGTSSVQALIDLFGSRGMG 166
>03_05_0524 -
25181432-25181483,25181565-25181691,25181776-25181826,
25182159-25182314,25182405-25182905,25182999-25183713,
25183797-25183867,25183974-25184103,25185706-25186167
Length = 754
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 406 VTALTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 287
V AL+P +P P+H ++ P + P V P + ++ P P
Sbjct: 343 VPALSP-SPPPLHGSVMPPPLPPATVEPVISAPMVEPPPP 381
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -3
Query: 382 PKPVHPTLPPNQIKPVPVYPTP-ATRLITTPGP 287
P P P PP+ P P PTP TR TP P
Sbjct: 225 PSPASPP-PPSTATPPPPSPTPTTTRASPTPPP 256
>08_01_0261 + 2131189-2131737
Length = 182
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = -3
Query: 403 TALTPVAPKPVHPT-LPPNQIKPV 335
TAL+P+AP+P PT + PN + P+
Sbjct: 123 TALSPMAPRPRTPTAMAPNAMPPM 146
>07_01_0577 -
4286048-4286186,4286600-4286660,4286957-4287089,
4287286-4287350,4288346-4288451,4288529-4288750,
4289619-4289852,4289948-4290037,4290605-4291507
Length = 650
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -3
Query: 391 PVAPKP-VHPTLP--PNQIKPVPVYPTPATRLITTPGP 287
P P P V PTLP P P P P+ +T T P P
Sbjct: 59 PPPPTPAVEPTLPIPPASTPPTPPQPSASTEPSTAPPP 96
>06_03_0996 + 26731442-26732121,26732573-26732772,26732930-26733330
Length = 426
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = -3
Query: 376 PVHP---TLPPNQIKPVPV-YPTPATRLITTPGPGSVQQLVTFYNSQGKG 239
P HP LPP+ P P P P +T P PG V + +G G
Sbjct: 77 PPHPQLLALPPSMAAPPPPPMPMPLQMPMTMPMPGDVYPALGIVKREGGG 126
>05_04_0419 + 21103418-21103597,21103768-21103931,21104420-21104846
Length = 256
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -3
Query: 394 TPVAPKPVHPTLPPN-QI-KPVPVYPTPATRLITTPGPGSVQ 275
TP+ P +PPN Q+ +P+P YP P P P +
Sbjct: 193 TPIDIHGFRPPMPPNPQVPEPLPNYPPPPYSPAPAPAPAPAE 234
>02_05_0860 -
32296743-32296769,32297328-32297357,32298432-32298503,
32298967-32299812
Length = 324
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = -3
Query: 346 IKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGKGSVIKPYSYSDAVKQG 194
+ PVP PTP + P P Q + F S ++ P S + + G
Sbjct: 150 VPPVPPAPTPTAAAVPPPPPPQQQTPMLFGQSNVFPPMVPPLSLGNGLVSG 200
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,994,169
Number of Sequences: 37544
Number of extensions: 358961
Number of successful extensions: 1703
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1629
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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