Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d21r
(660 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23453-9|AAC46755.1| 727|Caenorhabditis elegans Hypothetical pr... 32 0.31
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 31 0.72
Z78411-2|CAB01646.1| 285|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC024824-2|AAK85502.1| 740|Caenorhabditis elegans Hypothetical ... 29 2.9
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 3.9
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 3.9
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 29 3.9
Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical pr... 28 5.1
AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and inte... 28 5.1
AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and inte... 28 5.1
AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical ... 28 5.1
Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF016686-7|AAB66241.2| 664|Caenorhabditis elegans C-type lectin... 28 6.8
U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical pr... 27 8.9
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr... 27 8.9
>U23453-9|AAC46755.1| 727|Caenorhabditis elegans Hypothetical
protein B0252.1 protein.
Length = 727
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = -3
Query: 373 VHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGKGSVIKPYSYSDAVKQG 194
+HP LPP P T A L+T ++Q NS G+ + P++ + +K
Sbjct: 22 IHPVLPPPTELSCPTVGTNAYILVTVTPETDIRQFEDLLNSYGR---LMPFNSTQQIKYD 78
Query: 193 *TFNENIKDLI 161
F N ++
Sbjct: 79 FYFGSNYSTIV 89
>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform a protein.
Length = 1136
Score = 31.1 bits (67), Expect = 0.72
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = -3
Query: 397 LTPVAPKPVHPTLPPN--QIKPVPVY--PTPATRLITTPGP 287
L+ V+P P P++PP+ +IK +P Y PTPA R ++ P
Sbjct: 156 LSAVSPPPPLPSVPPSKERIKRIPSYLKPTPAPRSMSATLP 196
>Z78411-2|CAB01646.1| 285|Caenorhabditis elegans Hypothetical
protein F02D8.2 protein.
Length = 285
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 400 ALTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTP--GPGSVQQLVTFYNSQG 245
A+ P +PT PP ++P PVY TP IT P ++ F N+QG
Sbjct: 106 AVAPQYAMVPYPT-PPAYVRPPPVYVTPPPVYITPPPTTTTTIPPPKCFQNTQG 158
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 397 LTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 287
+ PV +P+ P P +PVP P PA + P P
Sbjct: 134 IPPVVTQPIVPPPVPEVSEPVPEPPIPAPGPVAPPTP 170
>AC024824-2|AAK85502.1| 740|Caenorhabditis elegans Hypothetical
protein Y55B1BR.2 protein.
Length = 740
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 379 KPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQ 275
+P+ P P + VP PTP+ I PG GS +
Sbjct: 274 EPLPPPPRPPSVPAVPAVPTPSRDPILGPGSGSAR 308
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = -3
Query: 385 APKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGKGSVIKPYSYSD 209
A P HP + P Q + +P PA T PG S Q ++F GKG P+ SD
Sbjct: 1601 ARPPQHPVITP-QTQTIPE-GDPARIQCTVPGNPSAAQHLSFERVDGKG---LPFGSSD 1654
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = -3
Query: 385 APKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGKGSVIKPYSYSD 209
A P HP + P Q + +P PA T PG S Q ++F GKG P+ SD
Sbjct: 1694 ARPPQHPVITP-QTQTIPE-GDPARIQCTVPGNPSAAQHLSFERVDGKG---LPFGSSD 1747
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = -3
Query: 385 APKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGKGSVIKPYSYSD 209
A P HP + P Q + +P PA T PG S Q ++F GKG P+ SD
Sbjct: 1694 ARPPQHPVITP-QTQTIPE-GDPARIQCTVPGNPSAAQHLSFERVDGKG---LPFGSSD 1747
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = -3
Query: 385 APKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGKGSVIKPYSYSD 209
A P HP + P Q + +P PA T PG S Q ++F GKG P+ SD
Sbjct: 1601 ARPPQHPVITP-QTQTIPE-GDPARIQCTVPGNPSAAQHLSFERVDGKG---LPFGSSD 1654
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = -3
Query: 385 APKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGKGSVIKPYSYSD 209
A P HP + P Q + +P PA T PG S Q ++F GKG P+ SD
Sbjct: 1694 ARPPQHPVITP-QTQTIPE-GDPARIQCTVPGNPSAAQHLSFERVDGKG---LPFGSSD 1747
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = -3
Query: 385 APKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGKGSVIKPYSYSD 209
A P HP + P Q + +P PA T PG S Q ++F GKG P+ SD
Sbjct: 1694 ARPPQHPVITP-QTQTIPE-GDPARIQCTVPGNPSAAQHLSFERVDGKG---LPFGSSD 1747
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = -3
Query: 385 APKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGKGSVIKPYSYSD 209
A P HP + P Q + +P PA T PG S Q ++F GKG P+ SD
Sbjct: 1693 ARPPQHPVITP-QTQTIPE-GDPARIQCTVPGNPSAAQHLSFERVDGKG---LPFGSSD 1746
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -3
Query: 382 PKPVH-PTLPPNQIKPVPVYPTPATRLITTPGP 287
P PV PT PP +P P PTP + P P
Sbjct: 540 PSPVREPTPPPPPREPTPREPTPEPEPVREPTP 572
>Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical
protein F13B10.1c protein.
Length = 1000
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 394 TPVAPKPVHPTLPPNQIKPVPVYPTPAT 311
+PV P + LPP P P P P T
Sbjct: 105 SPVDPPSISVPLPPKSAPPCPTQPAPLT 132
>Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical
protein F13B10.1a protein.
Length = 930
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 394 TPVAPKPVHPTLPPNQIKPVPVYPTPAT 311
+PV P + LPP P P P P T
Sbjct: 51 SPVDPPSISVPLPPKSAPPCPTQPAPLT 78
>AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform c protein.
Length = 984
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 394 TPVAPKPVHPTLPPNQIKPVPVYPTPAT 311
+PV P + LPP P P P P T
Sbjct: 105 SPVDPPSISVPLPPKSAPPCPTQPAPLT 132
>AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform a protein.
Length = 931
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 394 TPVAPKPVHPTLPPNQIKPVPVYPTPAT 311
+PV P + LPP P P P P T
Sbjct: 52 SPVDPPSISVPLPPKSAPPCPTQPAPLT 79
>AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical
protein Y47D7A.6 protein.
Length = 446
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -3
Query: 385 APKPVHPTLPPNQIKPVPVYPTPATRLITTP 293
A KP + T PP P YPT A+ TTP
Sbjct: 256 AQKPAYSTAPPTYPTEAPTYPTTAS-YETTP 285
>Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical
protein DY3.5 protein.
Length = 796
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -3
Query: 394 TPVAPKPVHPTLPPN-QIKPVPVYPTPATRLITTPGP 287
+P P T+ P Q K V P PAT + TP P
Sbjct: 645 SPTTRPPTRATIRPTPQNKAVTSRPAPATSSVVTPSP 681
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 397 LTPVAPKPVHPTLPPNQIKPVPVYPTP 317
+ P P P PT PP+ + P+ YP P
Sbjct: 85 VNPAPPLPTLPTPPPSTLPPI-TYPRP 110
>AF016686-7|AAB66241.2| 664|Caenorhabditis elegans C-type lectin
protein 44 protein.
Length = 664
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/52 (38%), Positives = 22/52 (42%)
Frame = -3
Query: 355 PNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGKGSVIKPYSYSDAVK 200
PN YP P T LIT P PG++ QL G I YS D K
Sbjct: 410 PNYSYGFSGYPNPCTYLITEP-PGTIAQLRFAELHLPLGRTIVLYSGIDETK 460
>U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical protein
C23F12.1a protein.
Length = 2329
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -3
Query: 385 APKPVHPTLPPNQIKPVPVYPTPATRLITTPGPG 284
+P P P +PP + P +YP + P PG
Sbjct: 2271 SPTPATPFIPPGWVAPPQMYPMQPGQQRFLPPPG 2304
>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
C23F12.1b protein.
Length = 2747
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -3
Query: 385 APKPVHPTLPPNQIKPVPVYPTPATRLITTPGPG 284
+P P P +PP + P +YP + P PG
Sbjct: 2689 SPTPATPFIPPGWVAPPQMYPMQPGQQRFLPPPG 2722
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,304,531
Number of Sequences: 27780
Number of extensions: 294540
Number of successful extensions: 1157
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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