Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d21r
(660 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g54930.1 68418.m06841 AT hook motif-containing protein contai... 33 0.17
At3g28790.1 68416.m03593 expressed protein 33 0.17
At1g07250.1 68414.m00771 UDP-glucoronosyl/UDP-glucosyl transfera... 33 0.17
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 33 0.22
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 33 0.22
At5g38560.1 68418.m04662 protein kinase family protein contains ... 31 0.51
At4g38080.1 68417.m05378 hydroxyproline-rich glycoprotein family... 31 0.68
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 31 0.68
At2g29740.1 68415.m03614 UDP-glucoronosyl/UDP-glucosyl transfera... 31 0.90
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 30 1.6
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 30 1.6
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 30 1.6
At1g07260.1 68414.m00772 UDP-glucoronosyl/UDP-glucosyl transfera... 30 1.6
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 29 2.1
At1g14710.2 68414.m01759 hydroxyproline-rich glycoprotein family... 29 2.1
At1g14710.1 68414.m01758 hydroxyproline-rich glycoprotein family... 29 2.1
At1g14430.1 68414.m01711 glyoxal oxidase-related low similarity ... 29 2.1
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 29 2.7
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 2.7
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 29 2.7
At2g16630.1 68415.m01909 proline-rich family protein contains pr... 29 2.7
At1g26150.1 68414.m03192 protein kinase family protein similar t... 29 2.7
At5g61090.1 68418.m07665 proline-rich family protein contains pr... 29 3.6
At4g16280.3 68417.m02471 flowering time control protein / FCA ga... 29 3.6
At4g16280.2 68417.m02470 flowering time control protein / FCA ga... 29 3.6
At4g16280.1 68417.m02469 flowering time control protein / FCA ga... 29 3.6
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 29 3.6
At5g26080.1 68418.m03103 proline-rich family protein contains pr... 28 4.8
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 28 4.8
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 28 4.8
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 28 4.8
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 4.8
At2g02490.1 68415.m00188 hydroxyproline-rich glycoprotein family... 28 4.8
At1g48100.1 68414.m05368 glycoside hydrolase family 28 protein /... 28 4.8
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 28 6.3
At1g47660.1 68414.m05295 hypothetical protein 28 6.3
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 28 6.3
At5g65100.1 68418.m08189 ethylene insensitive 3 family protein c... 27 8.4
At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid t... 27 8.4
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 27 8.4
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 27 8.4
>At5g54930.1 68418.m06841 AT hook motif-containing protein contains
Pfam profile PF02178: AT hook motif
Length = 286
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -3
Query: 400 ALTPVAPKPVHPTLPPNQIKPVPVYP 323
AL PV +P HPT+P N I PV + P
Sbjct: 150 ALVPVPIQPAHPTIPNNLIVPVVLQP 175
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 33.1 bits (72), Expect = 0.17
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -3
Query: 394 TPVAPKPVHPT-LPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGKGSVIKPYS 218
TP P P PT P P P PTP+T +TP G + + S K S K S
Sbjct: 282 TPSTPTPSTPTPSTPTPSTPTPSTPTPSTPAPSTPAAGKTSEKGSESASMKKESNSKSES 341
Query: 217 YSDA 206
S A
Sbjct: 342 ESAA 345
>At1g07250.1 68414.m00771 UDP-glucoronosyl/UDP-glucosyl transferase
family protein similar to UDP-glucose
glucosyltransferase GI:453245 from [Manihot esculenta]
Length = 479
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 206 GIAVTVRFDYTSFALAIVESDELLHASRSW--GGDEPRR 316
G+AV +R DY S +V DE+ A RS GGDE R+
Sbjct: 404 GLAVDLRMDYVSSRGGLVTCDEIARAVRSLMDGGDEKRK 442
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVT 263
PVAP P P PP P P P AT +TTP P V ++
Sbjct: 117 PVAPAPTRP--PPPAPTPTPA-PVAATETVTTPIPEPVPATIS 156
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVT 263
PVAP P P PP P P P AT +TTP P V ++
Sbjct: 117 PVAPAPTRP--PPPAPTPTPA-PVAATETVTTPIPEPVPATIS 156
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 31.5 bits (68), Expect = 0.51
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 394 TPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGS 281
TP AP PV P P Q P V +P ++++P P S
Sbjct: 31 TPSAPPPVTPPPSPPQSPPPVVSSSPPPPVVSSPPPSS 68
>At4g38080.1 68417.m05378 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family member: At2g22510
[Arabidopsis thaliana]
Length = 128
Score = 31.1 bits (67), Expect = 0.68
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -3
Query: 394 TPVAPKPV--HPTLPPNQIKPVPVYPTPATRLITTPGP 287
TPV P P LP + PVP PTP + + P P
Sbjct: 35 TPVTQPPALTFPPLPKTTMPPVPSLPTPGQQTLPQPQP 72
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 31.1 bits (67), Expect = 0.68
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -3
Query: 403 TALTPVAPKPVHPTL-PPNQIKPVPVYPTPATRLITTPGP 287
T P P P P + PP PV PTP ++T P P
Sbjct: 161 TPCPPPTPTPTPPVVTPPTPTPPVITPPTPTPPVVTPPTP 200
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -3
Query: 397 LTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 287
+TP P P T PP PV PTP +IT P P
Sbjct: 185 ITPPTPTPPVVT-PPTPTPPVITPPTPTPPVITPPTP 220
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -3
Query: 397 LTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 287
+TP P P T PP PV PTP +IT P P
Sbjct: 175 VTPPTPTPPVIT-PPTPTPPVVTPPTPTPPVITPPTP 210
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -3
Query: 397 LTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 287
+TP P P T PP PV PTP ++T P P
Sbjct: 205 ITPPTPTPPVIT-PPTPTPPVVTPPTPTPPVVTPPTP 240
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 287
P PKP H PP P P PTP ++T P P
Sbjct: 148 PSTPKPPHHKPPPTPCPP-PT-PTPTPPVVTPPTP 180
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -3
Query: 382 PKPVHPTL-PPNQIKPVPVYPTPATRLITTPGP 287
P P P + PP PV PTP ++T P P
Sbjct: 198 PTPTPPVITPPTPTPPVITPPTPTPPVVTPPTP 230
>At2g29740.1 68415.m03614 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 474
Score = 30.7 bits (66), Expect = 0.90
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +2
Query: 206 GIAVTVRFDYTSFALAIVESDELLHASRSW--GGDEPRR 316
G+A+ +R DY S IV++DE+ A RS G D PRR
Sbjct: 406 GLALEMRLDYVSEYGEIVKADEIAGAVRSLMDGEDVPRR 444
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -3
Query: 400 ALTPVAPKPVHPTLPPNQIKPVPV-YPTPA--TRLITTPGPGSVQQLVTFYNSQGKGS 236
A TP PKP PP KP P PTPA + P PG + T ++ + KG+
Sbjct: 91 APTPPNPKPTPAPTPPKP-KPAPAPAPTPAPKPKPAPKPAPGGEVEDETEFSYETKGN 147
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -3
Query: 400 ALTPVAPKPVH-PTLPPNQIKPVPVYPTPATRLITTP 293
A TP PKP PT P + KP P P P TP
Sbjct: 69 APTPPKPKPAPAPTPPKPKPKPAPTPPNPKPTPAPTP 105
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -3
Query: 400 ALTPVAPKPVH-PTLPPNQIKPVPVYPTPATRLITTP 293
A TP PKP PT P + KP P P P TP
Sbjct: 36 APTPPKPKPTPAPTPPKPKPKPAPTPPKPKPAPAPTP 72
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSV 278
P P P LPP P V PTP++ +TP PG++
Sbjct: 589 PSPPSSPSPPLPPVIPSPPIVGPTPSSPPPSTPTPGTL 626
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 394 TPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 287
+P P P++ PP P PVY +P + +P P
Sbjct: 542 SPSPPSPIYSPPPPVHSPPPPVYSSPPPPHVYSPPP 577
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -3
Query: 394 TPVAPKPVHPTLPPNQIKPVPVY-PTPAT 311
+P P PV+ PP+ P PVY P P T
Sbjct: 608 SPPPPSPVYSPPPPSHSPPPPVYSPPPPT 636
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -3
Query: 391 PVAPKPVH-PTLPPNQIKPVPVYPTPATRLITTPGPGS 281
P P PVH P PP P PV+ P + +P P S
Sbjct: 585 PSPPPPVHSPPPPPVFSPPPPVFSPPPPSPVYSPPPPS 622
>At1g07260.1 68414.m00772 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 476
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +2
Query: 206 GIAVTVRFDYTSFALAIVESDELLHASRSW--GGDEPRR 316
G+AV +R DY S IV+++E+ A RS G D PR+
Sbjct: 403 GLAVELRLDYVSAYGEIVKAEEIAGAIRSLMDGEDTPRK 441
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -3
Query: 382 PKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 287
P PVH PP P PVY P + +P P
Sbjct: 596 PPPVHSPPPPVHSPPPPVYSPPPPPPVHSPPP 627
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -3
Query: 382 PKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 287
P PVH PP P PVY P + + P P
Sbjct: 567 PPPVHSPPPPVHSPPPPVYSPPPPPVHSPPPP 598
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -3
Query: 382 PKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 287
P PVH PP P PVY P + + P P
Sbjct: 633 PPPVHSPPPPVYSPPPPVYSPPPPPVKSPPPP 664
>At1g14710.2 68414.m01759 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 601
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = -3
Query: 391 PVAPKPVHPTLPPN---QIKPVPVYPTPATRLITTPGPGSVQQLVTFYN-SQGK 242
P P PV P LPP+ Q P P P P T + PGS Q+L N ++GK
Sbjct: 524 PTGP-PVWPLLPPHPRHQTAPQPRMPIPGTGVFLP--PGSNQELADNSNGTEGK 574
>At1g14710.1 68414.m01758 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 601
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = -3
Query: 391 PVAPKPVHPTLPPN---QIKPVPVYPTPATRLITTPGPGSVQQLVTFYN-SQGK 242
P P PV P LPP+ Q P P P P T + PGS Q+L N ++GK
Sbjct: 524 PTGP-PVWPLLPPHPRHQTAPQPRMPIPGTGVFLP--PGSNQELADNSNGTEGK 574
>At1g14430.1 68414.m01711 glyoxal oxidase-related low similarity to
glyoxal oxidase precursor (glx1) [Phanerochaete
chrysosporium] GI:1050302
Length = 849
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -3
Query: 373 VHPTLPPNQIKPVPVY-PTPATRLITTPGPGSVQQLVTFYNSQGKGSVIKP 224
VH +P + + V PTP ++ P S L+ FYN G V+ P
Sbjct: 551 VHRGIPSVAVWEISVKTPTPREKIFDFVCPSSCDGLICFYNLYKSGIVVNP 601
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 7/40 (17%)
Frame = -3
Query: 391 PVAPKPVHPTLPPN-------QIKPVPVYPTPATRLITTP 293
P+ P PTLPPN + P+P+ PTP T L T P
Sbjct: 276 PLIPSIPTPTLPPNPLIPSPPSLPPIPLIPTPPT-LPTIP 314
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -3
Query: 394 TPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 287
TP P P P PP P P P+P + T P P
Sbjct: 141 TPSVPSPTPPVSPPPPT-PTPSVPSPTPPVPTDPMP 175
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -3
Query: 394 TPVAPKPVHPT-LPPNQIKPVPVYPTPATRLITTPGPGSV 278
TP P P P P P PV P P T + P P V
Sbjct: 159 TPSVPSPTPPVPTDPMPSPPPPVSPPPPTPTPSVPSPPDV 198
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 394 TPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 287
TP P+ P PP Q+ P P P+P TP P
Sbjct: 716 TPTYSPPIKP--PPVQVPPTPTTPSPPQGGYGTPPP 749
Score = 27.5 bits (58), Expect = 8.4
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Frame = -3
Query: 391 PVAPKPVH----PTL-PPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYN-SQGKGSVI 230
PV P PV PT PP + PV V PTP P P V T + QG
Sbjct: 688 PVKPPPVQVPPTPTYSPPVKPPPVQVPPTPTYSPPIKPPPVQVPPTPTTPSPPQGGYGTP 747
Query: 229 KPYSY 215
PY+Y
Sbjct: 748 PPYAY 752
>At2g16630.1 68415.m01909 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 359
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSV 278
PV P P P +PP Q VPV P P +I+ P ++
Sbjct: 155 PVMPPPQVPVMPPPQ---VPVKPHPKVPVISPDPPATL 189
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -3
Query: 385 APKPVHP-TLPPNQIKPVPVYPT--PATRLITTPGP 287
AP P +P + PP + P P PT P T IT+P P
Sbjct: 108 APPPANPVSSPPPESSPPPPPPTEAPPTTPITSPSP 143
>At5g61090.1 68418.m07665 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420;
common family members: At4g18570, At3g25690, At4g04980
[Arabidopsis thaliana]
Length = 344
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 394 TPVAPKPVHPTLPPNQI-KPVPVYPTPATRLITTPGP 287
TP AP+ V P P +I +PVP PTP T T P
Sbjct: 100 TPEAPRSV-PACPIPEIPRPVPARPTPETPRPVTARP 135
>At4g16280.3 68417.m02471 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 533
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 382 PKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGS 281
PKP TLP NQ P+ Y P + PG S
Sbjct: 363 PKPGQATLPSNQGGPLGGYGVPPLNPLPVPGVSS 396
>At4g16280.2 68417.m02470 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 747
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 382 PKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGS 281
PKP TLP NQ P+ Y P + PG S
Sbjct: 363 PKPGQATLPSNQGGPLGGYGVPPLNPLPVPGVSS 396
>At4g16280.1 68417.m02469 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 505
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 382 PKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGS 281
PKP TLP NQ P+ Y P + PG S
Sbjct: 121 PKPGQATLPSNQGGPLGGYGVPPLNPLPVPGVSS 154
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNS 251
P P P + PP+ + P P P P + T PG + + +Y +
Sbjct: 67 PSPPPPKKSSCPPSPLPPPP--PPPPPNYVFTYPPGDLYPIENYYGA 111
>At5g26080.1 68418.m03103 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 141
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKPVPVYPTPATRLITTP 293
P+ P P++ PP I P P+Y P T + P
Sbjct: 79 PIYPPPIYSP-PPPPIYPPPIYSPPPTPISPPP 110
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 391 PVAPKPVH-PTLPPNQIKPVPVYPTPATRLITTPGP 287
P P PV+ P PP P PVY P + ++P P
Sbjct: 488 PPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPP 523
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -3
Query: 394 TP-VAPKPVHPTLPPNQIKPVPVYPTPAT 311
TP VAP+ V P PP Q P PAT
Sbjct: 950 TPGVAPRSVQPASPPTQQAAAQAAPAPAT 978
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -3
Query: 394 TP-VAPKPVHPTLPPNQIKPVPVYPTPAT 311
TP VAP+ V P PP Q P PAT
Sbjct: 952 TPGVAPRSVQPASPPTQQAAAQAAPAPAT 980
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -3
Query: 382 PKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 287
P PVH PP P PV+ P I +P P
Sbjct: 782 PPPVHSPPPPVHSPPPPVHSPPPPSPIYSPPP 813
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -3
Query: 382 PKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSV 278
P PVH PP P PV P + + P P +
Sbjct: 714 PPPVHSPPPPVHSPPPPVQSPPPPPVFSPPPPAPI 748
>At2g02490.1 68415.m00188 hydroxyproline-rich glycoprotein family
protein related to LENOD2 [Lupinus luteus]
gi|296830|emb|CAA39050; and genefinder
Length = 302
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGS 281
PV P P HP P+Q K +PV P I+ P P S
Sbjct: 255 PVPPSPGHP---PHQNKKIPVNQYPRILPISHPVPPS 288
>At1g48100.1 68414.m05368 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase PG1 GI:5669846, PG2 GI:5669848 from
[Glycine max]; contains PF00295: Glycosyl hydrolases
family 28 (polygalacturonases)
Length = 475
Score = 28.3 bits (60), Expect = 4.8
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = -3
Query: 397 LTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQ----LVTFYNSQGKGSVI 230
L P P P+ PP+Q+ P YP+P P PG VT + + G GS
Sbjct: 42 LPPPPPPPLETANPPDQV-PSDPYPSP------DPAPGDSDSGCVFDVTSFGAVGDGSCD 94
Query: 229 KPYSYSDAVK 200
++ DA K
Sbjct: 95 DTAAFQDAWK 104
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKP---VPVYPTPATRLITTP 293
P P P P+LPP+ + P P TP + +T P
Sbjct: 152 PSPPSPPSPSLPPSSLPPSASPPTNGTPDSETLTPP 187
>At1g47660.1 68414.m05295 hypothetical protein
Length = 275
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Frame = -3
Query: 406 VTALTPVAPKPVHPTLPP--NQIKPVPVYPT---PATRLITTPGPGSV 278
V + P A P PT PP P PV+PT PA + P V
Sbjct: 21 VRTIAPRAAPPARPTTPPPARPTTPPPVWPTTPPPAGAPVAVPAAAHV 68
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -3
Query: 394 TPVAPKPVH-PTLPPNQIKPVPVYPTPATRLITTPGP 287
+P P PV+ P + P+ P PVY P T P P
Sbjct: 626 SPPPPSPVYYPPVTPSPPPPSPVYYPPVTPSPPPPSP 662
>At5g65100.1 68418.m08189 ethylene insensitive 3 family protein
contains Pfam profile: PF04873 ethylene insensitive 3
Length = 557
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -1
Query: 306 SSPPQDLEACSSSSLSTIARAKEV*SNRTVTAMP*SKVKHLTKISRI 166
SSP A SSSS S I R E + + S +K++ KI +
Sbjct: 67 SSPSSSTSASSSSSSSVIVRRTEASRRKKMARSQDSVLKYMMKIMEV 113
>At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 177
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -3
Query: 403 TALTPVAPKPVHPTLP-PNQIKPVPVYPTPATRLITTPGP 287
T +P P P +P+ P+ P P PTP+ + P P
Sbjct: 38 TVPSPKVPSPKYPSPSIPSPSVPTPSVPTPSVPTPSVPSP 77
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -3
Query: 391 PVAPKPVHPTLPPNQIKPVP-VYPTPATRLITTPGP 287
P P V+P+ PP P P VYP P + P P
Sbjct: 403 PPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPPPP 438
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -3
Query: 400 ALTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 287
A P PKP PP + KP P PA + + P P
Sbjct: 67 ACPPTPPKPQPKPAPPPEPKPA---PPPAPKPVPCPSP 101
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,386,672
Number of Sequences: 28952
Number of extensions: 273746
Number of successful extensions: 1249
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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