Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d21f
(569 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U34070-1|AAC50235.1| 358|Homo sapiens CCAAT/enhancer binding pr... 32 1.2
EU048234-1|ABS82765.1| 358|Homo sapiens CCAAT/enhancer binding ... 32 1.2
BC063874-1|AAH63874.1| 141|Homo sapiens CEBPA protein protein. 32 1.2
BC044311-1|AAH44311.2| 399|Homo sapiens hypothetical protein LO... 32 1.6
AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2 p... 32 1.6
AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein. 32 1.6
AB209089-1|BAD92326.1| 1469|Homo sapiens nuclear receptor co-rep... 32 1.6
AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein. 32 1.6
AY453840-1|AAR24087.1| 538|Homo sapiens atherin protein. 31 2.2
AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 2.2
AL591545-2|CAI40664.1| 1485|Homo sapiens RP11-419L10.1 protein. 31 2.2
AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 2.2
AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 2.2
AL161954-1|CAB82305.1| 110|Homo sapiens hypothetical protein pr... 31 2.2
AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 2.2
AL049820-2|CAI42305.1| 1485|Homo sapiens RP11-419L10.1 protein. 31 2.2
AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remod... 31 2.2
AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein EL... 31 2.2
AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein. 31 2.2
AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein. 31 2.2
AB033092-1|BAA86580.1| 601|Homo sapiens KIAA1266 protein protein. 31 2.2
AB033061-1|BAA86549.1| 1485|Homo sapiens KIAA1235 protein protein. 31 2.2
J03866-1|AAA62253.1| 613|Homo sapiens dihydrolipoamide acetyltr... 31 2.9
AF451977-1|AAL49758.1| 1431|Homo sapiens cask-interacting protei... 31 2.9
AB037727-1|BAA92544.1| 1154|Homo sapiens KIAA1306 protein protein. 31 2.9
AK223596-1|BAD97316.1| 647|Homo sapiens dihydrolipoamide S-acet... 31 3.8
AY603755-1|AAT80901.1| 3094|Homo sapiens striated muscle prefere... 30 5.0
AB037718-1|BAA92535.1| 2242|Homo sapiens KIAA1297 protein protein. 30 5.0
U83981-1|AAC25631.1| 674|Homo sapiens apoptosis associated prot... 29 8.7
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 29 8.7
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 29 8.7
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 29 8.7
CR457259-1|CAG33540.1| 674|Homo sapiens PPP1R15A protein. 29 8.7
BC003067-1|AAH03067.1| 674|Homo sapiens protein phosphatase 1, ... 29 8.7
AY390431-1|AAQ97597.1| 116|Homo sapiens HCTP4-binding protein p... 29 8.7
AK001361-1|BAA91649.1| 674|Homo sapiens protein ( Homo sapiens ... 29 8.7
>U34070-1|AAC50235.1| 358|Homo sapiens CCAAT/enhancer binding
protein alpha protein.
Length = 358
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 282 KPVHPTLPPNQIKPVPVYPTPATRLITTPGPGS 380
+P HPT PP + P P +P PA PGPGS
Sbjct: 221 QPGHPTPPPTPV-PSP-HPAPALGAAGLPGPGS 251
>EU048234-1|ABS82765.1| 358|Homo sapiens CCAAT/enhancer binding
protein (C/EBP), alpha protein.
Length = 358
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 282 KPVHPTLPPNQIKPVPVYPTPATRLITTPGPGS 380
+P HPT PP + P P +P PA PGPGS
Sbjct: 221 QPGHPTPPPTPV-PSP-HPAPALGAAGLPGPGS 251
>BC063874-1|AAH63874.1| 141|Homo sapiens CEBPA protein protein.
Length = 141
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 282 KPVHPTLPPNQIKPVPVYPTPATRLITTPGPGS 380
+P HPT PP + P P +P PA PGPGS
Sbjct: 4 QPGHPTPPPTPV-PSP-HPAPALGAAGLPGPGS 34
>BC044311-1|AAH44311.2| 399|Homo sapiens hypothetical protein
LOC339344 protein.
Length = 399
Score = 31.9 bits (69), Expect = 1.6
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 267 TPV--APKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGS-VQQLVTFYNSQGKGSVIKP 437
TPV P P+ P PP P PV P PA ++ TP P S V +V +G +I P
Sbjct: 301 TPVDSLPPPLPPPPPPPP-PPRPVLPPPAPKVEITPEPVSVVAAVVDGAVVAARGVIIAP 359
Query: 438 YSYSDA 455
S A
Sbjct: 360 RSEEGA 365
>AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2
protein.
Length = 2715
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 264 LTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 374
LTP AP P P PP+ P P+ P P + P P
Sbjct: 406 LTPPAPSPPPPLPPPSTSPPPPLCPPPPPPVSPPPLP 442
>AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein.
Length = 2605
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 264 LTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 374
LTP AP P P PP+ P P+ P P + P P
Sbjct: 296 LTPPAPSPPPPLPPPSTSPPPPLCPPPPPPVSPPPLP 332
>AB209089-1|BAD92326.1| 1469|Homo sapiens nuclear receptor
co-repressor 2 variant protein.
Length = 1469
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3
Query: 279 PKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 374
P P PT PP I P P PTPA+ P P
Sbjct: 796 PPPEPPTPPPEDI-PAPTEPTPASEATGAPTP 826
>AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein.
Length = 2415
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 264 LTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGP 374
LTP AP P P PP+ P P+ P P + P P
Sbjct: 106 LTPPAPSPPPPLPPPSTSPPPPLCPPPPPPVSPPPLP 142
>AY453840-1|AAR24087.1| 538|Homo sapiens atherin protein.
Length = 538
Score = 31.5 bits (68), Expect = 2.2
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +3
Query: 255 VTALTPVAPKPVHPTLPPNQIKPVPVYPTP-----ATRLITTPGPGSVQQLVTFYNSQG 416
V A P P P P PP Q +P P P P A R P S++++V + G
Sbjct: 204 VAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSG 262
>AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 288 VHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQ 386
V PT+P +Q+ P P P R IT P PGSV+
Sbjct: 1070 VMPTVPTSQVTGPPPQPPPIRREITFP-PGSVE 1101
>AL591545-2|CAI40664.1| 1485|Homo sapiens RP11-419L10.1 protein.
Length = 1485
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 288 VHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQ 386
V PT+P +Q+ P P P R IT P PGSV+
Sbjct: 819 VMPTVPTSQVTGPPPQPPPIRREITFP-PGSVE 850
>AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 288 VHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQ 386
V PT+P +Q+ P P P R IT P PGSV+
Sbjct: 1070 VMPTVPTSQVTGPPPQPPPIRREITFP-PGSVE 1101
>AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 288 VHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQ 386
V PT+P +Q+ P P P R IT P PGSV+
Sbjct: 1070 VMPTVPTSQVTGPPPQPPPIRREITFP-PGSVE 1101
>AL161954-1|CAB82305.1| 110|Homo sapiens hypothetical protein
protein.
Length = 110
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 288 VHPTLPPNQIKPVPVYPTPAT-RLITTPGPGSVQQL 392
+HP PN I+ P TP T R++TTP S+ L
Sbjct: 55 IHPAKKPNVIRSTPSLQTPTTKRMLTTPNHTSLSIL 90
>AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 288 VHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQ 386
V PT+P +Q+ P P P R IT P PGSV+
Sbjct: 1070 VMPTVPTSQVTGPPPQPPPIRREITFP-PGSVE 1101
>AL049820-2|CAI42305.1| 1485|Homo sapiens RP11-419L10.1 protein.
Length = 1485
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 288 VHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQ 386
V PT+P +Q+ P P P R IT P PGSV+
Sbjct: 819 VMPTVPTSQVTGPPPQPPPIRREITFP-PGSVE 850
>AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remodeling
complex subunit OSA2 protein.
Length = 2165
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 288 VHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQ 386
V PT+P +Q+ P P P R IT P PGSV+
Sbjct: 1499 VMPTVPTSQVTGPPPQPPPIRREITFP-PGSVE 1530
>AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein
ELD/OSA1 protein.
Length = 1740
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 288 VHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQ 386
V PT+P +Q+ P P P R IT P PGSV+
Sbjct: 1074 VMPTVPTSQVTGPPPQPPPIRREITFP-PGSVE 1105
>AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein.
Length = 1486
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 288 VHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQ 386
V PT+P +Q+ P P P R IT P PGSV+
Sbjct: 820 VMPTVPTSQVTGPPPQPPPIRREITFP-PGSVE 851
>AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein.
Length = 1957
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 288 VHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQ 386
V PT+P +Q+ P P P R IT P PGSV+
Sbjct: 1291 VMPTVPTSQVTGPPPQPPPIRREITFP-PGSVE 1322
>AB033092-1|BAA86580.1| 601|Homo sapiens KIAA1266 protein protein.
Length = 601
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 288 VHPTLPPNQIKPVPVYPTPAT-RLITTPGPGSVQQL 392
+HP PN I+ P TP T R++TTP S+ L
Sbjct: 546 IHPAKKPNVIRSTPSLQTPTTKRMLTTPNHTSLSIL 581
>AB033061-1|BAA86549.1| 1485|Homo sapiens KIAA1235 protein protein.
Length = 1485
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 288 VHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQ 386
V PT+P +Q+ P P P R IT P PGSV+
Sbjct: 819 VMPTVPTSQVTGPPPQPPPIRREITFP-PGSVE 850
>J03866-1|AAA62253.1| 613|Homo sapiens dihydrolipoamide
acetyltransferase protein.
Length = 613
Score = 31.1 bits (67), Expect = 2.9
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 255 VTALTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTP-GP 374
VT L P P P P + P P+ PTP+T TP GP
Sbjct: 278 VTDLKPQVPPPTPPPVAAVPPTPQPLAPTPSTPCPATPAGP 318
>AF451977-1|AAL49758.1| 1431|Homo sapiens cask-interacting protein 1
protein.
Length = 1431
Score = 31.1 bits (67), Expect = 2.9
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Frame = +3
Query: 276 APKPVHPTLPPNQI--KPVPVY---PTPATRLITTPGPGS 380
A KP P + P + +PVP PTP ++ + PGPGS
Sbjct: 1218 ARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPGS 1257
>AB037727-1|BAA92544.1| 1154|Homo sapiens KIAA1306 protein protein.
Length = 1154
Score = 31.1 bits (67), Expect = 2.9
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Frame = +3
Query: 276 APKPVHPTLPPNQI--KPVPVY---PTPATRLITTPGPGS 380
A KP P + P + +PVP PTP ++ + PGPGS
Sbjct: 941 ARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPGS 980
>AK223596-1|BAD97316.1| 647|Homo sapiens dihydrolipoamide
S-acetyltransferase (E2 component of pyruvate
dehydrogenase co protein.
Length = 647
Score = 30.7 bits (66), Expect = 3.8
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 255 VTALTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTP-GP 374
VT L P AP P P + P P+ PTP+ TP GP
Sbjct: 311 VTDLKPQAPPPTPPPVAAVPPTPQPLAPTPSAPCPATPAGP 351
>AY603755-1|AAT80901.1| 3094|Homo sapiens striated muscle
preferentially expressed protein protein.
Length = 3094
Score = 30.3 bits (65), Expect = 5.0
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = +3
Query: 270 PVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGKGSVIKPYSYS 449
P AP+P P PP K +PA ++++PG + +G KPY++
Sbjct: 2781 PPAPEPPAPEPPPEPTKVTVQSLSPAKEVVSSPGSSPRSSPRPEGTTLRQGPPQKPYTFL 2840
Query: 450 DAVKQG 467
+ +G
Sbjct: 2841 EEKARG 2846
>AB037718-1|BAA92535.1| 2242|Homo sapiens KIAA1297 protein protein.
Length = 2242
Score = 30.3 bits (65), Expect = 5.0
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = +3
Query: 270 PVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGKGSVIKPYSYS 449
P AP+P P PP K +PA ++++PG + +G KPY++
Sbjct: 1929 PPAPEPPAPEPPPEPTKVTVQSLSPAKEVVSSPGSSPRSSPRPEGTTLRQGPPQKPYTFL 1988
Query: 450 DAVKQG 467
+ +G
Sbjct: 1989 EEKARG 1994
>U83981-1|AAC25631.1| 674|Homo sapiens apoptosis associated protein
protein.
Length = 674
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 270 PVAPKP-VHPTLPPNQIKPVPVYPTPATRLITTPGPGS 380
P+AP P + TLP + + PV TP ++ + TP S
Sbjct: 623 PLAPIPALTQTLPSSSVPSSPVQTTPLSQAVATPSRSS 660
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 29.5 bits (63), Expect = 8.7
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +3
Query: 258 TALTPVAPKPVHPTLPPNQI--KPVPVYPTPATRLITTPGP 374
T TP P T PP P+ P+P T +TTP P
Sbjct: 1036 TTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSP 1076
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 29.5 bits (63), Expect = 8.7
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +3
Query: 258 TALTPVAPKPVHPTLPPNQI--KPVPVYPTPATRLITTPGP 374
T TP P T PP P+ P+P T +TTP P
Sbjct: 319 TTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSP 359
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 29.5 bits (63), Expect = 8.7
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +3
Query: 258 TALTPVAPKPVHPTLPPNQI--KPVPVYPTPATRLITTPGP 374
T TP P T PP P+ P+P T +TTP P
Sbjct: 1661 TTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSP 1701
>CR457259-1|CAG33540.1| 674|Homo sapiens PPP1R15A protein.
Length = 674
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 270 PVAPKP-VHPTLPPNQIKPVPVYPTPATRLITTPGPGS 380
P+AP P + TLP + + PV TP ++ + TP S
Sbjct: 623 PLAPIPALTQTLPSSSVPSSPVQTTPLSQAVATPSRSS 660
>BC003067-1|AAH03067.1| 674|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 15A protein.
Length = 674
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 270 PVAPKP-VHPTLPPNQIKPVPVYPTPATRLITTPGPGS 380
P+AP P + TLP + + PV TP ++ + TP S
Sbjct: 623 PLAPIPALTQTLPSSSVPSSPVQTTPLSQAVATPSRSS 660
>AY390431-1|AAQ97597.1| 116|Homo sapiens HCTP4-binding protein
protein.
Length = 116
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +3
Query: 267 TPVAPKPVHPTLPPNQ-IKPVPVYPTPATRLITTPGP 374
+PV +P HP L P I P+P P P T + P
Sbjct: 10 SPVPTQPQHPPLAPRPLIHPLPTNPQPRTLPVAQVSP 46
>AK001361-1|BAA91649.1| 674|Homo sapiens protein ( Homo sapiens
cDNA FLJ10499 fis, clone NT2RP2000346, weakly similar to
MYELOID DIFFERENTIATION PRIMARY RESPONSE PROTEIN MYD116.
).
Length = 674
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 270 PVAPKP-VHPTLPPNQIKPVPVYPTPATRLITTPGPGS 380
P+AP P + TLP + + PV TP ++ + TP S
Sbjct: 623 PLAPIPALTQTLPSSSVPSSPVQTTPLSQAVATPSRSS 660
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,660,877
Number of Sequences: 237096
Number of extensions: 1837557
Number of successful extensions: 11047
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 9650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10893
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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