Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d19f
(602 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 332 1e-91
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 332 1e-91
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 332 1e-91
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 332 1e-91
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 332 1e-91
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 332 1e-91
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 331 3e-91
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 329 8e-91
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 322 2e-88
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 293 6e-80
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 239 1e-63
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 198 2e-51
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 8e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 8e-48
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 2e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 9e-46
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 157 8e-39
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 128 3e-30
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 97 9e-21
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 50 1e-06
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 34 0.068
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.16
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 1.5
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 4.5
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 4.5
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 4.5
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 4.5
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.9
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 7.8
U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine rece... 27 7.8
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 7.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 332 bits (815), Expect = 1e-91
Identities = 153/155 (98%), Positives = 155/155 (100%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 332 bits (815), Expect = 1e-91
Identities = 153/155 (98%), Positives = 155/155 (100%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 332 bits (815), Expect = 1e-91
Identities = 153/155 (98%), Positives = 155/155 (100%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 332 bits (815), Expect = 1e-91
Identities = 153/155 (98%), Positives = 155/155 (100%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 332 bits (815), Expect = 1e-91
Identities = 153/155 (98%), Positives = 155/155 (100%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 332 bits (815), Expect = 1e-91
Identities = 153/155 (98%), Positives = 155/155 (100%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 331 bits (813), Expect = 3e-91
Identities = 153/155 (98%), Positives = 155/155 (100%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 155
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 329 bits (809), Expect = 8e-91
Identities = 151/155 (97%), Positives = 155/155 (100%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 155
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 322 bits (790), Expect = 2e-88
Identities = 148/153 (96%), Positives = 152/153 (99%)
Frame = +2
Query: 143 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 322
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 323 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 502
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 503 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
IMFETFNTPAMYV IQAVLSLYASGRTTGIVLD
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLD 154
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 293 bits (719), Expect = 6e-80
Identities = 135/137 (98%), Positives = 137/137 (100%)
Frame = +2
Query: 191 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 370
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 371 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 550
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 551 AVLSLYASGRTTGIVLD 601
AVLSLYASGRTTG+VLD
Sbjct: 125 AVLSLYASGRTTGVVLD 141
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 239 bits (584), Expect = 1e-63
Identities = 110/111 (99%), Positives = 111/111 (100%)
Frame = +2
Query: 269 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 448
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 449 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLD
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 111
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 198 bits (484), Expect = 2e-51
Identities = 86/148 (58%), Positives = 116/148 (78%), Gaps = 1/148 (0%)
Frame = +2
Query: 161 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 340
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 341 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 517
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 518 FNTPAMYVAIQAVLSLYASGRTTGIVLD 601
FN PA+Y+ +QAVLSLYA+GRTTG+VLD
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLD 158
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 8e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKI 394
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 8e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKI 394
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 2e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKI 394
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 9e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDM 385
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 157 bits (380), Expect = 8e-39
Identities = 77/150 (51%), Positives = 104/150 (69%), Gaps = 3/150 (2%)
Frame = +2
Query: 161 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 334
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 335 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 511
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 512 ETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
E + ++YVA+QAVL+LYA G TG+V+D
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVD 158
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 128 bits (309), Expect = 3e-30
Identities = 69/159 (43%), Positives = 91/159 (57%), Gaps = 13/159 (8%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 280
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 281 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 457
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 458 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 574
E PLN NRE +IMFE+FN P +Y+A+QAVL+L AS
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTAS 159
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 97.1 bits (231), Expect = 9e-21
Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 17/169 (10%)
Frame = +2
Query: 146 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 319
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 320 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 454
KR G + P ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 455 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
+E+ N +A REK+T+IMFE F PA Y++ VLS +A GRT G+++D
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVD 177
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/123 (27%), Positives = 58/123 (47%)
Frame = +2
Query: 152 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 331
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 332 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 511
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 512 ETF 520
+ F
Sbjct: 116 DYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/123 (27%), Positives = 58/123 (47%)
Frame = +2
Query: 152 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 331
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 332 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 511
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 512 ETF 520
+ F
Sbjct: 116 DYF 118
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 37.5 bits (83), Expect = 0.007
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 2/149 (1%)
Frame = +2
Query: 161 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 334
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 335 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 514
+E + D+ K EL+V P ++ VLL+ P ++ QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 515 TFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
+ + Q L LYA TTG+V+D
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVD 327
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 35.9 bits (79), Expect = 0.022
Identities = 29/83 (34%), Positives = 33/83 (39%)
Frame = +1
Query: 232 PLDRGKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLL 411
P G A P+G DG GT G + YP+P P G G D AS
Sbjct: 189 PGPSGPAGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTA 245
Query: 412 Q*AACRPRGTPSPAH*GSPQPQG 480
A P G P PA G+P P G
Sbjct: 246 APGAAGPPGPPGPA--GAPGPDG 266
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 34.3 bits (75), Expect = 0.068
Identities = 28/79 (35%), Positives = 32/79 (40%)
Frame = +1
Query: 244 GKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AA 423
G A P+G DG GT G + YP+P P G G D AS A
Sbjct: 194 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGA 250
Query: 424 CRPRGTPSPAH*GSPQPQG 480
P G P PA G+P P G
Sbjct: 251 AGPPGPPGPA--GAPGPDG 267
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 33.1 bits (72), Expect = 0.16
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = -3
Query: 465 GASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 286
GA S G SS S+ I + ++ T+ S PL++ +SS S
Sbjct: 424 GAPSSTLGSSSSTIVSTT------ITPSTPKVSTLTLSQSPTPTSTPLVVSSSSSGSSST 477
Query: 285 CPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATSSS 142
TITP +G+PT N S+P P + STT A +++S
Sbjct: 478 VVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTAS 526
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 323 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 168
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 323 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 168
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 421 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 546
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 216 ASSPAKPALHIPEPLSTTNAATSS 145
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 421 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 546
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 216 ASSPAKPALHIPEPLSTTNAATSS 145
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 421 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 546
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 216 ASSPAKPALHIPEPLSTTNAATSS 145
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 421 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 546
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 216 ASSPAKPALHIPEPLSTTNAATSS 145
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 191 KAGFAGDDAPRAVFPSIVGRPRHQG 265
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 241 RGKAPPSGRDGRYGTEG 291
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
>U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine
receptor, class w protein121 protein.
Length = 362
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 576 PDAYSESTAWMATYMAGVLNVSNMIWVIFSLL 481
P S TAW+ GV N+ N + IFS+L
Sbjct: 286 PYGLSIGTAWIFLLAPGVYNILNQLASIFSML 317
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 376 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 266
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,710,001
Number of Sequences: 27780
Number of extensions: 371560
Number of successful extensions: 1471
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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