Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d19f
(602 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 307 3e-84
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 307 4e-84
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 307 4e-84
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 305 1e-83
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 304 2e-83
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 304 2e-83
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 300 4e-82
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 300 4e-82
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 300 4e-82
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 280 6e-76
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 227 3e-60
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 195 2e-50
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 164 5e-41
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 130 5e-31
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 118 3e-27
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 104 5e-23
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 87 6e-18
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 78 5e-15
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 77 1e-14
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 39 0.002
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 39 0.002
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.083
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 31 0.59
At1g32190.1 68414.m03959 expressed protein 30 1.4
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.4
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.4
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 5.5
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 5.5
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.2
At3g05750.1 68416.m00646 expressed protein 27 7.2
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 27 7.2
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 9.6
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 27 9.6
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 9.6
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 307 bits (754), Expect = 3e-84
Identities = 142/152 (93%), Positives = 147/152 (96%)
Frame = +2
Query: 146 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 325
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 326 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 505
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 506 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
MFETFNTPAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 156
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 307 bits (753), Expect = 4e-84
Identities = 142/152 (93%), Positives = 146/152 (96%)
Frame = +2
Query: 146 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 325
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 326 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 505
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 506 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
MFETFNTPAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 156
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 307 bits (753), Expect = 4e-84
Identities = 142/152 (93%), Positives = 146/152 (96%)
Frame = +2
Query: 146 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 325
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 326 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 505
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 506 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
MFETFNTPAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 156
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 305 bits (749), Expect = 1e-83
Identities = 141/152 (92%), Positives = 146/152 (96%)
Frame = +2
Query: 146 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 325
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 326 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 505
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 506 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
MFETFN PAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 125 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLD 156
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 304 bits (747), Expect = 2e-83
Identities = 140/152 (92%), Positives = 145/152 (95%)
Frame = +2
Query: 146 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 325
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 326 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 505
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 506 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
MFETFN PAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLD 156
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 304 bits (747), Expect = 2e-83
Identities = 140/152 (92%), Positives = 145/152 (95%)
Frame = +2
Query: 146 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 325
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 326 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 505
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 506 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
MFETFN PAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLD 156
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 300 bits (737), Expect = 4e-82
Identities = 135/152 (88%), Positives = 146/152 (96%)
Frame = +2
Query: 146 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 325
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 326 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 505
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 506 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLD 156
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 300 bits (737), Expect = 4e-82
Identities = 135/152 (88%), Positives = 146/152 (96%)
Frame = +2
Query: 146 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 325
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 326 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 505
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 506 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLD 156
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 300 bits (737), Expect = 4e-82
Identities = 135/152 (88%), Positives = 146/152 (96%)
Frame = +2
Query: 146 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 325
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 326 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 505
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 506 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLD 156
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 280 bits (686), Expect = 6e-76
Identities = 123/152 (80%), Positives = 142/152 (93%)
Frame = +2
Query: 146 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 325
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 326 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 505
GIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 506 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
MFE+F P+MY+ IQAVLSLY+SGRTTGIVLD
Sbjct: 126 MFESFAFPSMYIGIQAVLSLYSSGRTTGIVLD 157
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 227 bits (556), Expect = 3e-60
Identities = 104/147 (70%), Positives = 122/147 (82%)
Frame = +2
Query: 161 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 340
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 341 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 520
K P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 521 NTPAMYVAIQAVLSLYASGRTTGIVLD 601
+ PAMYV++Q+VL LY+SGRTTG+VLD
Sbjct: 119 DVPAMYVSMQSVLYLYSSGRTTGVVLD 145
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 195 bits (475), Expect = 2e-50
Identities = 85/111 (76%), Positives = 101/111 (90%)
Frame = +2
Query: 269 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 448
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 449 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VLD
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLD 111
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 164 bits (398), Expect = 5e-41
Identities = 73/149 (48%), Positives = 101/149 (67%), Gaps = 2/149 (1%)
Frame = +2
Query: 161 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 334
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 335 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 514
+ YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 515 TFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
+N +++ IQAVL+LYA G TG+V+D
Sbjct: 127 KYNFAGVFIQIQAVLTLYAQGLLTGLVID 155
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 130 bits (315), Expect = 5e-31
Identities = 71/174 (40%), Positives = 104/174 (59%), Gaps = 22/174 (12%)
Frame = +2
Query: 146 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 295
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 296 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 439
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 440 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
HP+LL E PLN + REK ++MFE + PA+++A VL+ +A+GR T +V+D
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVD 178
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 118 bits (284), Expect = 3e-27
Identities = 72/174 (41%), Positives = 99/174 (56%), Gaps = 26/174 (14%)
Frame = +2
Query: 158 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 283
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 284 QKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 454
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 455 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT-----TGIVLD 601
TE+PL P +RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVD 178
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 104 bits (249), Expect = 5e-23
Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 16/132 (12%)
Frame = +2
Query: 146 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 280
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 281 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 457
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 458 EAPLNPKANREK 493
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 87.4 bits (207), Expect = 6e-18
Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 2/150 (1%)
Frame = +2
Query: 158 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 334
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 335 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 511
TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 512 ETFNTPAMYVAIQAVLSLYASGRTTGIVLD 601
ETFN Y + QAVLSLYA GR +G +D
Sbjct: 113 ETFNVSGFYASEQAVLSLYAVGRISGCTVD 142
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 77.8 bits (183), Expect = 5e-15
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Frame = +2
Query: 161 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 340
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 341 -----KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQ 502
+ P + +V ++ ME I + F + +HP+L+TE NP +R KM +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 503 IMFETFNTPAMYVAIQAVLSLYASGRTTGI 592
++FET+ PA+ + A S Y + GI
Sbjct: 138 LLFETYGVPAVAFGVDAAFS-YKYNQLHGI 166
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 76.6 bits (180), Expect = 1e-14
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
Frame = +2
Query: 161 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 340
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 341 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 520
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 521 NTPAMYVA-IQAVLSLYASGRTTGIVL 598
++Y+A Q+++ LY + R +L
Sbjct: 122 GFSSLYIAHPQSLVHLYEASRQPDSIL 148
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 10/76 (13%)
Frame = +2
Query: 404 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 553
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 554 VLSLYASGRTTGIVLD 601
VL+LYA+ RT+GIV++
Sbjct: 241 VLALYAARRTSGIVVN 256
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 10/76 (13%)
Frame = +2
Query: 404 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 553
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 554 VLSLYASGRTTGIVLD 601
VL+LYA+ RT+GIV++
Sbjct: 241 VLALYAARRTSGIVVN 256
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.083
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 282 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 145
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 31.1 bits (67), Expect = 0.59
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 460 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRALAVRVRSYHR 588
GSP+ +G + E+D D + NI+H + +H + A+ SY R
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLYGKMSYGR 136
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +3
Query: 507 CSKHSTRPPCTSPSKPCSRC-TRPVVPPVSCW 599
C K S C P+ CS C +P P SCW
Sbjct: 343 CKKPSCVSSCCCPTFKCSSCFGKPKCPKCSCW 374
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 305 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 484
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 485 REK 493
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 305 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 484
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 485 REK 493
REK
Sbjct: 225 REK 227
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 393 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 304
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 385 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 278
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 258 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 136
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +2
Query: 146 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR-HQGVMVGMGQKDSYVGDEAQSK 322
++V ++V+NG+ K GF A ++ S+ + + G +++ V + + K
Sbjct: 386 KKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIK 445
Query: 323 RG--ILTLKYPIEHGIVTNWDDMEK 391
+G ++ ++ G+ T DD +K
Sbjct: 446 KGEKVIKCNITVDGGLKTGDDDRKK 470
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = +2
Query: 371 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 550
+W +E + + + + P LL EA + PK+ E +++TF T ++ +
Sbjct: 488 DWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFIKPK 547
Query: 551 AVLSLYASGRTTGIVL 598
+ +A G VL
Sbjct: 548 LSRTDFAVAHYAGEVL 563
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 444 GCSSGATRSSL*-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 286
GC G T++ L C+ +S+ + TIP + Y + PL LC T + +
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKY 506
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 454 H*GSPQPQGQQREDDPDHVRN 516
H GSP+ +G + EDD D + N
Sbjct: 91 HRGSPRVEGDEDEDDVDDIEN 111
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 371 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 520
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,007,118
Number of Sequences: 28952
Number of extensions: 352122
Number of successful extensions: 1090
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1197101088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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