Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d18r
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 37 0.017
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 32 0.48
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z69384-6|CAA93414.3| 499|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.9
U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helical... 28 5.9
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 28 5.9
U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fb... 28 5.9
Z75540-1|CAA99847.2| 1227|Caenorhabditis elegans Hypothetical pr... 28 7.8
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 28 7.8
AL033508-3|CAA22054.1| 315|Caenorhabditis elegans Hypothetical ... 28 7.8
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 28 7.8
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 28 7.8
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 28 7.8
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 28 7.8
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 28 7.8
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -3
Query: 402 SVTPKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTP 223
+VT T ++P TT S + PP ++T + +T+ V ST IAP+T
Sbjct: 407 NVTSTTTAPTTESSAIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTM 466
Query: 222 SNTT 211
+TT
Sbjct: 467 PSTT 470
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 703 LYMSVVIGEYETAIA-KCSEYLKEKKGEVIKEAVKRLIE 590
LYM +G+Y+ A KC +Y K+ G+ EA++ I+
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 31.1 bits (67), Expect = 0.84
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = -2
Query: 649 EYLKEKKGEVIKEA-VKRLIENGKRNTMDFAYQLWTKDGKEIVKSY--FPIQFRVIFTEQ 479
EY + E + VK ++ K+N +D WT+ E +KSY F + R FTE
Sbjct: 187 EYSRLVSNETSRNVFVKSIVSFFKKNDIDGIEIFWTRPKYEDIKSYSSFIQELRSAFTE- 245
Query: 478 TVKLINKRDHHALKLI 431
K N+++ + + LI
Sbjct: 246 LQKRWNRKNEYIISLI 261
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = -3
Query: 393 PKTKPARKSPGSLPPCWKTTE--YTSRSCPPKTNST*SSITRKVLVMTVSSTVIA 235
PKT+P P ++P CW+ + PP+ N+T I K + V+A
Sbjct: 418 PKTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVNNTMPLIEDKCYAKLGDTLVMA 472
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = -3
Query: 339 TTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTPSNTT 211
TTE S + PP ++T + +T+ V ST IAP+T +TT
Sbjct: 393 TTE--SSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 433
>Z69384-6|CAA93414.3| 499|Caenorhabditis elegans Hypothetical
protein T11G6.4 protein.
Length = 499
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -2
Query: 355 TPVL-ENNRVYFKIMSTEDKQYLKLDNTKGS-SDDRIIYGDSTADTFKHH 212
TPVL + R K+ + EDK L D+ S S+D ++ D T KHH
Sbjct: 444 TPVLIKEKRKRHKLKAREDKALLNSDSDSNSDSEDDLLLNDQTTRR-KHH 492
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 625 EVIKEAVKRLIENGKRNTMDFAYQLWTKDG 536
+V+K ++ L +NT+D A Q+W K+G
Sbjct: 242 DVVKTRMQGLEAKKYKNTLDCAMQIWKKEG 271
>U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform b
protein.
Length = 1250
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = -2
Query: 496 VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 341
++ T++ +K++N +R H L L +KI F D D + + W +P LE
Sbjct: 911 IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970
Query: 340 NNRVYFKIMSTEDK 299
V FK+ +K
Sbjct: 971 AGTVLFKVSIFREK 984
>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform a
protein.
Length = 2456
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = -2
Query: 496 VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 341
++ T++ +K++N +R H L L +KI F D D + + W +P LE
Sbjct: 911 IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970
Query: 340 NNRVYFKIMSTEDK 299
V FK+ +K
Sbjct: 971 AGTVLFKVSIFREK 984
>U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 9 protein.
Length = 703
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = -2
Query: 709 EQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKE 530
E+ Y ++GE E + KC +K++ G ++++IE + + F +TK+ +
Sbjct: 440 EEKYQHEILGEMEGQVLKC---VKDQNG---NHVIQKVIERVEPERLQFIIDAFTKNNSD 493
Query: 529 IV--KSYFPIQFRVI 491
V S P RVI
Sbjct: 494 NVYTLSVHPYGCRVI 508
>Z75540-1|CAA99847.2| 1227|Caenorhabditis elegans Hypothetical
protein F37D6.1 protein.
Length = 1227
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +2
Query: 266 RTFRVIELQVLFVFGGHDLEVYSVVFQHGGKLPGDFLAGFVFGVTECNFVVVLLVDQLEG 445
R F +E+ + + G ++ HGGK+PG T C++ L+ D++ G
Sbjct: 273 RVFEGLEMAITSIDGADRTNFIQLIEDHGGKVPG------TMSKTRCSY---LISDKITG 323
Query: 446 VMVPFVYELDSL 481
V E S+
Sbjct: 324 VKYAKAVEWKSM 335
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.9 bits (59), Expect = 7.8
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = -2
Query: 685 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 506
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 3825 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 3879
Query: 505 QFRVIFTEQTVKLINKRDHHA 443
T ++ + + HA
Sbjct: 3880 LITTTPTNSSLHIGRLENSHA 3900
>AL033508-3|CAA22054.1| 315|Caenorhabditis elegans Hypothetical
protein Y106G6G.4 protein.
Length = 315
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -3
Query: 327 TSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTL 202
TS PP TNS+ S++ V+ ++S+ + L + T TL
Sbjct: 223 TSTDPPPTTNSSNSTVESVTSVIPINSSTVPVLNTTLQTSTL 264
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.9 bits (59), Expect = 7.8
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = -2
Query: 685 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 506
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 3778 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 3832
Query: 505 QFRVIFTEQTVKLINKRDHHA 443
T ++ + + HA
Sbjct: 3833 LITTTPTNSSLHIGRLENSHA 3853
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 27.9 bits (59), Expect = 7.8
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = -2
Query: 685 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 506
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 4063 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 4117
Query: 505 QFRVIFTEQTVKLINKRDHHA 443
T ++ + + HA
Sbjct: 4118 LITTTPTNSSLHIGRLENSHA 4138
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.9 bits (59), Expect = 7.8
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = -2
Query: 685 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 506
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 4063 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 4117
Query: 505 QFRVIFTEQTVKLINKRDHHA 443
T ++ + + HA
Sbjct: 4118 LITTTPTNSSLHIGRLENSHA 4138
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.9 bits (59), Expect = 7.8
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = -2
Query: 685 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 506
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 4022 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 4076
Query: 505 QFRVIFTEQTVKLINKRDHHA 443
T ++ + + HA
Sbjct: 4077 LITTTPTNSSLHIGRLENSHA 4097
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.9 bits (59), Expect = 7.8
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = -2
Query: 685 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 506
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 3794 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 3848
Query: 505 QFRVIFTEQTVKLINKRDHHA 443
T ++ + + HA
Sbjct: 3849 LITTTPTNSSLHIGRLENSHA 3869
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,987,721
Number of Sequences: 27780
Number of extensions: 373323
Number of successful extensions: 1548
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1548
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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