Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d18r
         (725 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    25   0.73 
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    25   0.73 
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    25   0.73 
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    25   0.96 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   3.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   3.9  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   6.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.0  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -2

Query: 667 AIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVK 521
           A+A   +   +K+ EVIK+ +K L+EN K    D     +  D K  VK
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN-KPELWDSLANKYDPDKKYRVK 118


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = -2

Query: 667 AIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFP-IQFRVI 491
           A+A   +   +K+ EVIK+ +K L+EN          +LW      +   Y P  +FRV 
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVENKP--------ELW----DSLANKYDPDKKFRVK 118

Query: 490 FTEQTVKL 467
           F E+  KL
Sbjct: 119 FEEEAKKL 126


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -2

Query: 667 AIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVK 521
           A+A   +   +K+ EVIK+ +K L+EN K    D     +  D K  VK
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN-KPELWDSLANKYDPDKKYRVK 118


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -2

Query: 547 TKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIA 404
           T + K+I K   P + ++I     V ++   DH    L+D   +  IA
Sbjct: 124 TMENKDITKRPLPNESQLIKRHPIVTIMGHVDHGKTTLLDALRNTSIA 171


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +2

Query: 278 VIELQVLFVFGGHDLEVYSVVFQHGGKLPGD 370
           VI +  + V    +L+  +V+F+HG ++P +
Sbjct: 3   VIAILAMVVGVQAELKQINVIFRHGDRIPDE 33


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 341 KQQSILQDHVHRRQTVPEAR*HERF 267
           + Q ++Q HV    T+PE +   RF
Sbjct: 386 RNQDVVQTHVLTIHTIPEVKVTPRF 410


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = +2

Query: 317 DLEVYSVVFQHGGKLPGD 370
           +L+  +V+F+HG ++P +
Sbjct: 1   ELKQINVIFRHGDRIPDE 18


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 473 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQE 372
           Q H+Q+      V    +PQQ   +  Q+Q QQ+
Sbjct: 422 QQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQ 455


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,089
Number of Sequences: 438
Number of extensions: 4347
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)