Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d17r
         (775 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    26   1.1  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   3.4  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 520 GTSPTGRRHLHRRPSTCRGTRPLTS 594
           G+SP   RH+  RP  C G    T+
Sbjct: 409 GSSPDSIRHMQGRPGGCNGLHSTTA 433


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 11/46 (23%), Positives = 17/46 (36%)
 Frame = +3

Query: 336 CNSCVSTSAVTCAGAVSSVCDLRSQM*HHQYSCFSCGKYGQCTGCE 473
           CN C +     C G    +C   +      +S  +C      TGC+
Sbjct: 559 CNECATIDGSICGGPDHGICTCGTCSCFDSWSGDNCECTTDTTGCK 604


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,283
Number of Sequences: 2352
Number of extensions: 8736
Number of successful extensions: 26
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)