Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10d17f
(627 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35) 128 3e-30
SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40) 64 9e-11
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 62 3e-10
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0) 62 5e-10
SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 60 1e-09
SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 60 1e-09
SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37) 58 8e-09
SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37) 57 1e-08
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 56 3e-08
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 54 1e-07
SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29) 52 5e-07
SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30) 50 2e-06
SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33) 49 3e-06
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_2302| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24) 48 5e-06
SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007) 48 6e-06
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 48 8e-06
SB_13154| Best HMM Match : DnaJ (HMM E-Value=7.9e-11) 47 1e-05
SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26) 46 2e-05
SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_3343| Best HMM Match : DnaJ (HMM E-Value=0.067) 40 0.002
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_47290| Best HMM Match : Ank (HMM E-Value=5.4e-29) 38 0.009
SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_29448| Best HMM Match : DnaJ (HMM E-Value=0.00022) 32 0.33
SB_24982| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_52096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_11077| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_16586| Best HMM Match : DnaJ (HMM E-Value=4.9e-10) 29 4.1
SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_56512| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 27 9.4
SB_21236| Best HMM Match : Toxin_8 (HMM E-Value=10) 27 9.4
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_2148| Best HMM Match : WSC (HMM E-Value=0.039) 27 9.4
>SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1671
Score = 128 bits (310), Expect = 3e-30
Identities = 62/123 (50%), Positives = 83/123 (67%), Gaps = 16/123 (13%)
Frame = +1
Query: 307 IVSGWVLLGFLAYKVSQFDYEMSNFDPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETG 486
IV W++ AYK+SQFD + + +DPY +L + GA+ AEI++ YR S HPDKETG
Sbjct: 1223 IVILWIVFFAGAYKISQFDRDFAEYDPYAVLEIDRGASVAEIRRQYRSLSKKYHPDKETG 1282
Query: 487 DEKAFMRLTKAYQA----------------LTDDEARRNWEKYGNPDGPGAMSFGIALPS 618
D + FMR+ KAY+A LT++E+R+NWE++GNPDGPGA SFGIALPS
Sbjct: 1283 DPRKFMRIAKAYEAVSDFNKVDYCTDDHFRLTNEESRKNWEEHGNPDGPGATSFGIALPS 1342
Query: 619 WIV 627
W+V
Sbjct: 1343 WLV 1345
>SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40)
Length = 250
Score = 64.1 bits (149), Expect = 9e-11
Identities = 29/67 (43%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = +1
Query: 382 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGD----EKAFMRLTKAYQALTDDEAR 549
D YE+LG+P A++ ++KK+YR+Q+L HPDK + E+ F +L++AY+ L+D E R
Sbjct: 4 DYYEVLGVPRSASEEDVKKAYRRQALRWHPDKNPTNREHAEEKFKKLSEAYEVLSDKEKR 63
Query: 550 RNWEKYG 570
++KYG
Sbjct: 64 DIYDKYG 70
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/61 (44%), Positives = 43/61 (70%)
Frame = +1
Query: 388 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKAFMRLTKAYQALTDDEARRNWEKY 567
Y+IL +PP AT EIKKSYRK +L HPDK + F ++++AY+ L+D++ R+ +++
Sbjct: 67 YDILNVPPTATATEIKKSYRKLALKYHPDKNPDEGDRFKQISQAYEVLSDEKKRKIYDEG 126
Query: 568 G 570
G
Sbjct: 127 G 127
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +1
Query: 388 YEILGLPPGATQAEIKKSYRKQSLVLHPD--KETGDEKAFMRLTKAYQALTDDEARRNWE 561
Y ILG+P A+ +IKK+YR+Q+L+ HPD K +G E+ F +++AY+ LTD R ++
Sbjct: 6 YAILGVPRNASDDDIKKAYRRQALIFHPDKNKNSGAEEKFKEISEAYKVLTDPRQRDIFD 65
Query: 562 KYG 570
YG
Sbjct: 66 MYG 68
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 62.1 bits (144), Expect = 4e-10
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Frame = +1
Query: 382 DPYEILGLPPGATQAEIKKSYRKQSLVLHPD--KETGDEKAFMRLTKAYQALTDDEARRN 555
D Y+ILG+PP A Q EIKK+Y + + HPD K+ + F +++AY+ L+DD R+
Sbjct: 59 DYYKILGVPPNANQKEIKKAYFELAKKYHPDTNKDKSASEKFQEVSEAYEVLSDDGKRKA 118
Query: 556 WEKYGNPDGPGA 591
++ +G D GA
Sbjct: 119 YDSFGQTDFSGA 130
>SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 576
Score = 61.7 bits (143), Expect = 5e-10
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Frame = +1
Query: 382 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGD--EKAFMRLTKAYQALTDDEARRN 555
D Y+ILG+P A+ +IKK++RK ++ HPDK G E+ F + +AY+ L+D+ RR
Sbjct: 26 DYYQILGVPRNASDKQIKKAFRKMAVKYHPDKNKGKDAEEKFREVAEAYEVLSDENKRRQ 85
Query: 556 WEKYG 570
++++G
Sbjct: 86 YDQFG 90
>SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 386
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/61 (42%), Positives = 40/61 (65%)
Frame = +1
Query: 388 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKAFMRLTKAYQALTDDEARRNWEKY 567
Y++LG+P A+ +IKK+YRK + LHPDK + F +T AY+ L+D E R +++Y
Sbjct: 7 YDLLGVPQNASDNDIKKAYRKLAKELHPDKNPDTGEKFKDITFAYEILSDPEKRELYDRY 66
Query: 568 G 570
G
Sbjct: 67 G 67
>SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 79
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/61 (42%), Positives = 40/61 (65%)
Frame = +1
Query: 388 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKAFMRLTKAYQALTDDEARRNWEKY 567
Y++LG+P A+ +IKK+YRK + LHPDK + F +T AY+ L+D E R +++Y
Sbjct: 7 YDLLGVPQNASDNDIKKAYRKLAKELHPDKNPDTGEKFKDITFAYEILSDPEKRELYDRY 66
Query: 568 G 570
G
Sbjct: 67 G 67
>SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/64 (39%), Positives = 41/64 (64%)
Frame = +1
Query: 388 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKAFMRLTKAYQALTDDEARRNWEKY 567
YE+LG+ AT +I+++YR+ +L HPDK G E+ F +++AY+ L D + R ++K
Sbjct: 6 YEVLGVERNATTDDIRRAYRRLALKYHPDKNAGTEENFKEVSEAYEVLCDPQQRERFDKK 65
Query: 568 GNPD 579
PD
Sbjct: 66 FAPD 69
>SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 58.0 bits (134), Expect = 6e-09
Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = +1
Query: 388 YEILGLPPGATQAEIKKSYRKQSLVLHPD--KETGDEKAFMRLTKAYQALTDDEARRNWE 561
Y+ILG+ A+ E+KK+Y+KQ+ HPD K+ G E+ F + +AY+ L+D + R ++
Sbjct: 6 YDILGVKKDASDQELKKAYKKQAFKYHPDKNKDPGAEEKFKEIAEAYEVLSDPQKREIFD 65
Query: 562 KYG 570
+YG
Sbjct: 66 QYG 68
>SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37)
Length = 399
Score = 57.6 bits (133), Expect = 8e-09
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +1
Query: 382 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDK--ETGDEKAFMRLTKAYQALTDDEARRN 555
D Y+ILGL AT A+IKK YRK SL HPDK E E F + +AY L+D + R
Sbjct: 4 DYYDILGLTRSATDADIKKEYRKLSLKYHPDKNQEPSAEVKFRQAAEAYDVLSDPKKRAI 63
Query: 556 WEKYG 570
+ ++G
Sbjct: 64 YNQFG 68
>SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)
Length = 238
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Frame = +1
Query: 382 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKA---FMRLTKAYQALTDDEARR 552
D Y ILG+P A++ +IK++YRK ++ LHPDK D KA F + AY+ L DD+ R+
Sbjct: 25 DFYAILGVPRDASKNQIKRAYRKLAMKLHPDKNKDDPKAQEKFHDIGAAYEVLADDDQRK 84
Query: 553 NWEKYG 570
+++ G
Sbjct: 85 IYDQRG 90
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +1
Query: 382 DPYEILGLPPGATQAEIKKSYRKQSLVLHPD--KETGDEKAFMRLTKAYQALTDDEARRN 555
D Y +L + A+ +IKK+YRKQ+L HPD K G E+ F +++AY+ L+D + +
Sbjct: 4 DYYAVLNVDKAASADDIKKAYRKQALKYHPDKNKSPGAEEKFKEISEAYEVLSDPKKKEI 63
Query: 556 WEKYG 570
+++YG
Sbjct: 64 YDQYG 68
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 53.6 bits (123), Expect = 1e-07
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 7/102 (6%)
Frame = +1
Query: 295 VKLAIVSGWVLL-GFLAYKVSQFDY-EMSNFDPYEILGLPPGATQAEIKKSYRKQSLVLH 468
V +VSG+V + + + + FD E + Y++LG+ ATQAEI+++YR+ SL LH
Sbjct: 2452 VLFILVSGFVCVHAWDSVDLELFDIVEEVKDNFYQVLGVETTATQAEIRRAYRRISLQLH 2511
Query: 469 PD--KETGDEKAFMRLTKAYQALTDDEARRNWE---KYGNPD 579
PD KE E F +L + L D++ R+ ++ + G PD
Sbjct: 2512 PDRNKEDDAELKFRKLVAVAEVLKDEDKRKRYDTILRDGMPD 2553
>SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Frame = +1
Query: 388 YEILGLPPGATQAEIKKSYRKQSLVLHPDK-ETGD-EKA---FMRLTKAYQALTDDEARR 552
Y++LG+ A+++EIK++YRK SL +HPD+ + G+ EKA F L+K+Y L+D E R
Sbjct: 17 YDVLGVSKTASESEIKRAYRKISLQVHPDRADKGEKEKATRKFQALSKSYCILSDKEKRA 76
Query: 553 NWEKYGNPD 579
+++ G D
Sbjct: 77 IYDESGEID 85
>SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29)
Length = 291
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = +1
Query: 388 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKA---FMRLTKAYQALTDDEAR 549
Y+ LG+ +T+ EI K+YRK++L HPDK + KA F +L+KA + LTD +AR
Sbjct: 9 YDTLGVHKDSTEKEILKAYRKKALKCHPDKNPDNPKASELFHKLSKALEVLTDPKAR 65
>SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30)
Length = 238
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = +1
Query: 388 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEK---AFMRLTKAYQALTDDEARRNW 558
Y +LG+ P A+Q++IK +Y K S+ HPD+ G +K F + +AY L + E+R+ +
Sbjct: 74 YNVLGVSPKASQSKIKDAYYKLSMKHHPDRHQGSDKKHEVFQEIAEAYSVLGNLESRKQY 133
Query: 559 EK 564
++
Sbjct: 134 DR 135
>SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = +1
Query: 388 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEK---AFMRLTKAYQALTDDEARRNW 558
Y +LG+ P A+Q++IK +Y K S+ HPD+ G +K F + +AY L + E+R+ +
Sbjct: 74 YNVLGVSPKASQSKIKDAYYKLSMKHHPDRHQGSDKKHEVFQEIAEAYSVLGNLESRKQY 133
Query: 559 EK 564
++
Sbjct: 134 DR 135
>SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33)
Length = 138
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 4/56 (7%)
Frame = +1
Query: 382 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGD----EKAFMRLTKAYQALTD 537
D Y+IL +P A++ +IKKSYRK +L HPDK + E+ F +++AY+ L+D
Sbjct: 3 DYYDILEVPRSASEQDIKKSYRKLALKWHPDKNPQNKEEAERKFKEISEAYEVLSD 58
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Frame = +1
Query: 382 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGD-----EKAFMRLTKAYQALTDDEA 546
D Y+ILGL + EI K+YRK ++ HPD G+ EK F+ + A + LTD E
Sbjct: 208 DYYKILGLKRNCNKREITKAYRKLAVKWHPDNYKGEDKKKAEKMFIDIAAAKEVLTDPEK 267
Query: 547 RRNWEKYGNPDGPGAMSFGIALP 615
R ++ +P P + G P
Sbjct: 268 RAKYDAGEDPLDPESQQGGGGWP 290
>SB_2302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +1
Query: 388 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDE--KAFMRLTKAYQALTDDEARRNWE 561
Y+++ L P ATQ EIK +Y + S + HPD + E + F LT AY L+ E RR ++
Sbjct: 53 YDVMKLLPTATQREIKSAYYELSRIYHPDLNSSAEARERFAELTLAYNTLSRLETRREYD 112
Query: 562 K 564
K
Sbjct: 113 K 113
>SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24)
Length = 565
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +1
Query: 388 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDE--KAFMRLTKAYQALTDDEARRNWE 561
Y+++ L P ATQ EIK +Y + S + HPD + E + F LT AY L+ E RR ++
Sbjct: 200 YDVMKLLPTATQREIKSAYYELSRIYHPDLNSSAEARERFAELTLAYNTLSRLETRREYD 259
Query: 562 K 564
K
Sbjct: 260 K 260
>SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007)
Length = 831
Score = 48.0 bits (109), Expect = 6e-06
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +1
Query: 382 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDK 477
DPY ILG+PP A+ +IK+ YRK ++++HPDK
Sbjct: 800 DPYSILGVPPEASDDDIKRQYRKLAVLIHPDK 831
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
Frame = +1
Query: 382 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETG--------DEKAFMRLTKAYQALTD 537
D Y+IL + A++ EIKK+Y+K++L HPD+ +G EK F + +AY L+D
Sbjct: 159 DYYKILNISKTASEDEIKKAYKKEALKHHPDRHSGASDEQKKIAEKQFKEVNEAYSILSD 218
Query: 538 DEARRNWE 561
+ +R ++
Sbjct: 219 PKKKRRYD 226
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
Frame = +1
Query: 382 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETG--------DEKAFMRLTKAYQALTD 537
D Y+IL + A++ EIKK+Y+K++L HPD+ +G EK F + +AY L+D
Sbjct: 159 DYYKILNISKTASEDEIKKAYKKEALKHHPDRHSGASDEQKKIAEKQFKEVNEAYSILSD 218
Query: 538 DEARRNWE 561
+ +R ++
Sbjct: 219 PKKKRRYD 226
>SB_13154| Best HMM Match : DnaJ (HMM E-Value=7.9e-11)
Length = 340
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = +1
Query: 364 YEMSNFDPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKAFMRLTKAYQALTDDE 543
YE+ D L + +KK+ RKQ L+ HPDK GD + + AY L DDE
Sbjct: 133 YEILGLDMKTARKLSKDELKKTLKKACRKQLLIWHPDKNGGDAEQARNIIMAYSCLEDDE 192
Query: 544 ARRNWEKYGNPD 579
R + + D
Sbjct: 193 TRARYNNQADYD 204
>SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 875
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Frame = +1
Query: 388 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGD----EKAFMRLTKAYQALTDDEARR 552
Y +LGL ATQ EIKK Y+K ++ HPD+ + +K FM + +AY+ L+ + +R
Sbjct: 796 YRVLGLTEDATQEEIKKRYKKLAMKWHPDRHRDNKEEAQKHFMEIQEAYEILSKLKTKR 854
>SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = +1
Query: 388 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGD---EKAFMRLTKAYQALTDDEARRNW 558
YEIL +P A+Q EIK ++ K++ HPD D KAF+++++AY L+ R+ +
Sbjct: 10 YEILDVPKDASQTEIKSAFIKKTKEFHPDVNPDDPDSHKAFIKVSEAYTTLSSSARRQQY 69
Query: 559 E 561
+
Sbjct: 70 D 70
>SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26)
Length = 211
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = +1
Query: 388 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGD---EKAFMRLTKAYQALTDDEARRNW 558
YEIL +P A+Q EIK ++ K++ HPD D KAF+++++AY L+ R+ +
Sbjct: 71 YEILDVPKDASQTEIKSAFIKKTKEFHPDVNPDDPDSHKAFIKVSEAYTTLSSSARRQQY 130
Query: 559 E 561
+
Sbjct: 131 D 131
>SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Frame = +1
Query: 388 YEILGLPPGATQAEIKKSYRKQSLVLHPDK--ETGDE--KAFMRLTKAYQALTDDEARRN 555
YE+LG+ + +KK+YRK +L HPDK + +E + F + +AY L+D + R
Sbjct: 6 YEVLGVERDVDDSALKKTYRKLALKWHPDKNLDNAEESTRVFREIQQAYDVLSDPQERAF 65
Query: 556 WEKY 567
++K+
Sbjct: 66 YDKH 69
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Frame = +1
Query: 382 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKET--GDEKAFMRLT 513
D YE LG+ GAT+ +I ++Y+K ++++HPDK G E+AF L+
Sbjct: 143 DHYERLGIQQGATKDDINRAYKKLAVLIHPDKSVAPGSEEAFKALS 188
>SB_3343| Best HMM Match : DnaJ (HMM E-Value=0.067)
Length = 29
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +1
Query: 394 ILGLPPGATQAEIKKSYRKQSLVLHPDK 477
ILG+PP A+ +IK+ YRK ++++HPDK
Sbjct: 2 ILGVPPEASDDDIKRQYRKLAVLIHPDK 29
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 382 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDK 477
D YE+ G+ AT EI+K+++K +L LHPDK
Sbjct: 28 DYYELFGISRDATSKEIRKAFKKLALRLHPDK 59
>SB_47290| Best HMM Match : Ank (HMM E-Value=5.4e-29)
Length = 445
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +1
Query: 343 YKVSQFDYEMSNFDPYEILGLPPGATQAEIKKSYRKQSLVLHPDK---ETGDEKAFMRLT 513
+K+ E+ +F Y +L AT +I ++K++ HPDK +T + F RL
Sbjct: 277 FKIVTKTEELEDF--YSLLDCGEYATNEQINTEFKKKAKEWHPDKKRNDTDSHEYFARLK 334
Query: 514 KAYQALTDDEARRNWEKY 567
KA L D++ R ++ +
Sbjct: 335 KARDVLCDEKMRAKYDHW 352
>SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 361 DYEMSNFDPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEK 495
D D Y +L + A + E+K +YR+ ++ HPDK T EK
Sbjct: 124 DESEDEVDYYAVLAVRKEANEDELKAAYRRLCVLYHPDKHTDPEK 168
>SB_29448| Best HMM Match : DnaJ (HMM E-Value=0.00022)
Length = 118
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 388 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDE 492
Y+++ L P AT EIK +Y + S + HPD + E
Sbjct: 77 YDVMKLLPTATLREIKSAYYELSRIYHPDLNSSAE 111
>SB_24982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 32.3 bits (70), Expect = 0.33
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 427 EIKKSYRKQSLVLHPDKETGD 489
++KK+YRK L +HPDK TG+
Sbjct: 484 DVKKAYRKAVLCVHPDKLTGE 504
>SB_52096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 997
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 460 VLHPDKE-TGDEKAFMRLTKAYQALTDDEARRNW 558
VL+P + GDE MR A+++DE RRNW
Sbjct: 947 VLNPGEAGPGDELTTMRRAYGLSAMSEDEGRRNW 980
>SB_11077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 95
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 460 VLHPDKE-TGDEKAFMRLTKAYQALTDDEARRNW 558
VL+P + GDE MR A+++DE RRNW
Sbjct: 45 VLNPGEAGPGDELTTMRRAYGLSAMSEDEGRRNW 78
>SB_16586| Best HMM Match : DnaJ (HMM E-Value=4.9e-10)
Length = 141
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 382 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDK 477
D +LG+ P IK++YRK HPDK
Sbjct: 75 DACNVLGVKPTDDATTIKRAYRKLMSEHHPDK 106
>SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 448 KQSLVLHPDKETGDEKAFMRLTKAYQALTDDEARRNWEKYGNPD 579
KQ+L +H +E+ K +A D A+ EKYG PD
Sbjct: 795 KQNLEIHKKMSMTEEQREEYERKEREAKYRDRAKERREKYGQPD 838
>SB_56512| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1219
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 317 DGCYLDF--WHTRSHSLIMRCQTLIRMKFWAYLLVQ 418
DG +LD+ W HSL RC + K +++ +Q
Sbjct: 91 DGHFLDWYKWKESIHSLACRCSAAAKKKGYSFFAIQ 126
>SB_21236| Best HMM Match : Toxin_8 (HMM E-Value=10)
Length = 173
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 388 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDE 492
YE P ++ ++ Y++ L LHP KET +E
Sbjct: 139 YEKFESRPQTSRKPVENLYQRYILTLHPCKETNNE 173
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 502 MRLTKAYQALTDDEARRNWEKYGN 573
++ T AY A+ +DE NWE + +
Sbjct: 198 LQATNAYSAMLEDEQPNNWETFAH 221
>SB_2148| Best HMM Match : WSC (HMM E-Value=0.039)
Length = 159
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 317 DGCYLDF--WHTRSHSLIMRCQTLIRMKFWAYLLVQ 418
DG +LD+ W HSL RC + K +++ +Q
Sbjct: 54 DGHFLDWYKWKESIHSLACRCSAAAKKKGYSFFAIQ 89
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,434,642
Number of Sequences: 59808
Number of extensions: 399393
Number of successful extensions: 944
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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