Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10d17f
         (627 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            26   1.1  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    23   6.0  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   6.0  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 617  LGKAMPKLIAPGPSGLPYFSQLRLASSSVR 528
            L KA PKL  P P  L    + R+ S ++R
Sbjct: 3046 LSKASPKLRLPKPPNLARMLRFRIRSDAIR 3075


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 145 ILVPATFYYWPKKRKEDPAKLAERCQCPN 231
           I+ P T    PKK   +  K+ +RC+  N
Sbjct: 323 IVAPTTIPTVPKKSLAEVGKVYDRCELAN 351


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 427  EIKKSYRKQSLVLHPDKETGDEKAFMRLTKAYQALTDDEARRNWEK 564
            E+ K  RK  ++L+ D    D  A MRL        + + ++ W+K
Sbjct: 1156 EVLKRRRKLIIILYGDLPQRDLDADMRLYLRTNTCIEWDDKKFWQK 1201


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,397
Number of Sequences: 2352
Number of extensions: 13529
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)